RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 DCAF17Q5H9S7 520 aaPredicted RBP11.71□□□□□ -0.53
NUP188-201ENST00000372577 RNF26Q9BY78 433 aaPredicted RBP11.71□□□□□ -0.53
NUP188-201ENST00000372577 FOXP1Q9H334 677 aaPredicted RBP11.71□□□□□ -0.53
NUP188-201ENST00000372577 ARHGEF35A5YM69 484 aa11.71□□□□□ -0.53
NUP188-201ENST00000372577 LAD1O00515 517 aa11.71□□□□□ -0.53
NUP188-201ENST00000372577 PTPN12Q05209 780 aaKnown RBP11.71□□□□□ -0.53
NUP188-201ENST00000372577 PLS1Q14651 629 aa11.71□□□□□ -0.53
NUP188-201ENST00000372577 NELFBQ8WX92 580 aa11.71□□□□□ -0.53
NUP188-201ENST00000372577 TIGD1Q96MW7 591 aa11.71□□□□□ -0.53
NUP188-201ENST00000372577 OGFRQ9NZT2 677 aa11.71□□□□□ -0.53
NUP188-201ENST00000372577 XDHP47989 1333 aa11.71□□□□□ -0.54
NUP188-201ENST00000372577 ADD2P35612 726 aa11.71□□□□□ -0.54
NUP188-201ENST00000372577 SCRN1Q12765 414 aa11.71□□□□□ -0.54
NUP188-201ENST00000372577 MCM6Q14566 821 aa11.71□□□□□ -0.54
NUP188-201ENST00000372577 CCDC26Q8TAB7 109 aa11.71□□□□□ -0.54
NUP188-201ENST00000372577 CHURC1Q8WUH1 139 aa11.71□□□□□ -0.54
NUP188-201ENST00000372577 ZNF804BA4D1E1 1349 aa11.71□□□□□ -0.54
NUP188-201ENST00000372577 SMCO2A6NFE2 343 aa11.71□□□□□ -0.54
NUP188-201ENST00000372577 BACH1O14867 736 aa11.71□□□□□ -0.54
NUP188-201ENST00000372577 HOXA7P31268 230 aaPredicted RBP11.71□□□□□ -0.54
NUP188-201ENST00000372577 ASIC2Q16515 512 aa11.71□□□□□ -0.54
NUP188-201ENST00000372577 UNC5CLQ8IV45 518 aa11.71□□□□□ -0.54
NUP188-201ENST00000372577 RASEFQ8IZ41 740 aa11.71□□□□□ -0.54
NUP188-201ENST00000372577 JAKMIP2Q96AA8 810 aa11.71□□□□□ -0.54
NUP188-201ENST00000372577 ZC3H13Q5T200 1668 aaKnown RBP11.7□□□□□ -0.54
NUP188-201ENST00000372577 H7C1W4 665 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 ZBED4O75132 1171 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 GYG1P46976 350 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 WDR44Q5JSH3 913 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 RNF187Q5TA31 235 aaPredicted RBP11.7□□□□□ -0.54
NUP188-201ENST00000372577 PNMA1Q8ND90 353 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 IFT74Q96LB3 600 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 SERTAD1Q9UHV2 236 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 ASAP1Q9ULH1 1129 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 V9GYY5 206 aaPredicted RBP11.7□□□□□ -0.54
NUP188-201ENST00000372577 SPATA31A3Q5VYP0 1347 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 SPDYE4A6NLX3 237 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 CYP21A2P08686 494 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 LONP1P36776 959 aaKnown RBP11.7□□□□□ -0.54
NUP188-201ENST00000372577 PHKA1P46020 1223 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 NLRP10Q86W26 655 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 USP40Q9NVE5 1235 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 POLR3EQ9NVU0 708 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.7□□□□□ -0.54
NUP188-201ENST00000372577 EVCP57679 992 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 RAPGEF1Q13905 1077 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 LARGE2Q8N3Y3 721 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 MYRIPQ8NFW9 859 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 TTC14Q96N46 770 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 CUEDC2Q9H467 287 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 LRRC7Q96NW7 1537 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 hCG_1984214I3L0E3 225 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 STX10O60499 249 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 SEL1L2Q5TEA6 688 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 KRBA2Q6ZNG9 492 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 ZNF713Q8N859 430 aaPredicted RBP11.7□□□□□ -0.54
NUP188-201ENST00000372577 PI4K2BQ8TCG2 481 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 WWC3Q9ULE0 1092 aa11.7□□□□□ -0.54
NUP188-201ENST00000372577 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.7□□□□□ -0.54
NUP188-201ENST00000372577 PPRC1Q5VV67 1664 aaKnown RBP11.7□□□□□ -0.54
NUP188-201ENST00000372577 FAM47AQ5JRC9 791 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 NOX5Q96PH1 765 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 TLR7Q9NYK1 1049 aaKnown RBP11.69□□□□□ -0.54
NUP188-201ENST00000372577 ZBTB1Q9Y2K1 713 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 GTPBP6O43824 516 aaPredicted RBP11.69□□□□□ -0.54
NUP188-201ENST00000372577 NR1I2O75469 434 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 FMNL1O95466 1100 aaPredicted RBP11.69□□□□□ -0.54
NUP188-201ENST00000372577 HERC4Q5GLZ8 1057 aaPredicted RBP11.69□□□□□ -0.54
NUP188-201ENST00000372577 NCAPH2Q6IBW4 605 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 SREK1Q8WXA9 508 aaKnown RBP11.69□□□□□ -0.54
NUP188-201ENST00000372577 IWS1Q96ST2 819 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 A6NNZ2 444 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 STAMBPO95630 424 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 TNFAIP3P21580 790 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 CDC25BP30305 580 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 ADD1P35611 737 aaKnown RBP11.69□□□□□ -0.54
NUP188-201ENST00000372577 EIF6P56537 245 aaKnown RBP11.69□□□□□ -0.54
NUP188-201ENST00000372577 TUBB8Q3ZCM7 444 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 SLFN12Q8IYM2 578 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 NLGN1Q8N2Q7 840 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 RPGRIP1Q96KN7 1286 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 TSNARE1Q96NA8 513 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 FNBP1Q96RU3 617 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 PUS3Q9BZE2 481 aaKnown RBP11.69□□□□□ -0.54
NUP188-201ENST00000372577 SWAP70Q9UH65 585 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 PCDHA7Q9UN72 937 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 ZNF500O60304 480 aaPredicted RBP11.69□□□□□ -0.54
NUP188-201ENST00000372577 KRT9P35527 623 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 TNFAIP1Q13829 316 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 DLGAP5Q15398 846 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 ADCK5Q3MIX3 580 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 CARMIL3Q8ND23 1372 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 GPT2Q8TD30 523 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 SECISBP2LQ93073 1101 aaKnown RBP11.69□□□□□ -0.54
NUP188-201ENST00000372577 CSRNP2Q9H175 543 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 RNF216Q9NWF9 866 aaPredicted RBP11.69□□□□□ -0.54
NUP188-201ENST00000372577 ADORA1P30542 326 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 SLC39A14Q15043 492 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 CAPZA3Q96KX2 299 aa11.69□□□□□ -0.54
NUP188-201ENST00000372577 CCDC17Q96LX7 622 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms