RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 IFNL3Q8IZI9 196 aa16.38■□□□□ 0.21
LDB3-204ENST00000372066 DENND2AQ9ULE3 1009 aa16.38■□□□□ 0.21
LDB3-204ENST00000372066 LAMB1P07942 1786 aa16.37■□□□□ 0.21
LDB3-204ENST00000372066 NID2Q14112 1375 aa16.37■□□□□ 0.21
LDB3-204ENST00000372066 SH2B2O14492 632 aaPredicted RBP16.37■□□□□ 0.21
LDB3-204ENST00000372066 CPLX1O14810 134 aa16.37■□□□□ 0.21
LDB3-204ENST00000372066 BCAMP50895 628 aa16.37■□□□□ 0.21
LDB3-204ENST00000372066 CHST3Q7LGC8 479 aa16.37■□□□□ 0.21
LDB3-204ENST00000372066 TBC1D10CQ8IV04 446 aa16.37■□□□□ 0.21
LDB3-204ENST00000372066 FUCA2Q9BTY2 467 aa16.37■□□□□ 0.21
LDB3-204ENST00000372066 CFHR5Q9BXR6 569 aa16.37■□□□□ 0.21
LDB3-204ENST00000372066 NUP62CLQ9H1M0 184 aa16.37■□□□□ 0.21
LDB3-204ENST00000372066 NCOA5Q9HCD5 579 aaKnown RBP16.37■□□□□ 0.21
LDB3-204ENST00000372066 HIBADHP31937 336 aaKnown RBP16.36■□□□□ 0.21
LDB3-204ENST00000372066 CLCN1P35523 988 aa16.36■□□□□ 0.21
LDB3-204ENST00000372066 LIFRP42702 1097 aa16.36■□□□□ 0.21
LDB3-204ENST00000372066 GYG1P46976 350 aa16.36■□□□□ 0.21
LDB3-204ENST00000372066 IREB2P48200 963 aaKnown RBP16.36■□□□□ 0.21
LDB3-204ENST00000372066 RASA3Q14644 834 aa16.36■□□□□ 0.21
LDB3-204ENST00000372066 FBXO46Q6PJ61 603 aaPredicted RBP16.36■□□□□ 0.21
LDB3-204ENST00000372066 SGMS1Q86VZ5 419 aa16.36■□□□□ 0.21
LDB3-204ENST00000372066 IFNL1Q8IU54 200 aa16.36■□□□□ 0.21
LDB3-204ENST00000372066 WNK4Q96J92 1243 aa16.36■□□□□ 0.21
LDB3-204ENST00000372066 RNF41Q9H4P4 317 aaPredicted RBP16.36■□□□□ 0.21
LDB3-204ENST00000372066 RTN4Q9NQC3 1192 aaKnown RBP16.36■□□□□ 0.21
LDB3-204ENST00000372066 LRP2BPQ9P2M1 347 aa16.36■□□□□ 0.21
LDB3-204ENST00000372066 COL1A1P02452 1464 aaPredicted RBP16.36■□□□□ 0.21
LDB3-204ENST00000372066 USP2O75604 605 aaPredicted RBP16.35■□□□□ 0.21
LDB3-204ENST00000372066 CCDC192P0DO97 292 aa16.35■□□□□ 0.21
LDB3-204ENST00000372066 ZBTB48P10074 688 aaPredicted RBP16.35■□□□□ 0.21
LDB3-204ENST00000372066 MFSD14BQ5SR56 506 aa16.35■□□□□ 0.21
LDB3-204ENST00000372066 AKNAD1Q5T1N1 836 aa16.35■□□□□ 0.21
LDB3-204ENST00000372066 BRAPQ7Z569 592 aa16.35■□□□□ 0.21
LDB3-204ENST00000372066 TDRD7Q8NHU6 1098 aaKnown RBP16.35■□□□□ 0.21
LDB3-204ENST00000372066 STAG1Q8WVM7 1258 aa16.35■□□□□ 0.21
LDB3-204ENST00000372066 FAM84BQ96KN1 310 aaPredicted RBP16.35■□□□□ 0.21
LDB3-204ENST00000372066 EPB41L4AQ9HCS5 686 aaPredicted RBP16.35■□□□□ 0.21
LDB3-204ENST00000372066 RCOR1Q9UKL0 485 aa16.35■□□□□ 0.21
LDB3-204ENST00000372066 TTF2Q9UNY4 1162 aaKnown RBP16.35■□□□□ 0.21
LDB3-204ENST00000372066 FAM205AQ6ZU69 1335 aa16.35■□□□□ 0.21
LDB3-204ENST00000372066 UNCXA6NJT0 531 aa16.34■□□□□ 0.21
LDB3-204ENST00000372066 GSG1L2A8MUP6 293 aa16.34■□□□□ 0.21
LDB3-204ENST00000372066 DTNBO60941 627 aa16.34■□□□□ 0.21
LDB3-204ENST00000372066 RCAN1P53805 252 aa16.34■□□□□ 0.21
LDB3-204ENST00000372066 FAM173BQ6P4H8 233 aa16.34■□□□□ 0.21
LDB3-204ENST00000372066 C8orf76Q96K31 380 aa16.34■□□□□ 0.21
LDB3-204ENST00000372066 RRAGDQ9NQL2 400 aaPredicted RBP16.34■□□□□ 0.21
LDB3-204ENST00000372066 ORC3Q9UBD5 711 aaPredicted RBP16.34■□□□□ 0.21
LDB3-204ENST00000372066 FDPSP14324 419 aaKnown RBP16.34■□□□□ 0.21
LDB3-204ENST00000372066 ADD1P35611 737 aaKnown RBP16.34■□□□□ 0.21
LDB3-204ENST00000372066 TDO2P48775 406 aa16.34■□□□□ 0.21
LDB3-204ENST00000372066 METAP2P50579 478 aaKnown RBP eCLIP16.34■□□□□ 0.21
LDB3-204ENST00000372066 SART3Q15020 963 aaKnown RBP16.34■□□□□ 0.21
LDB3-204ENST00000372066 RBM43Q6ZSC3 357 aaKnown RBP16.34■□□□□ 0.21
LDB3-204ENST00000372066 TDRD3Q9H7E2 651 aaKnown RBP16.34■□□□□ 0.21
LDB3-204ENST00000372066 ARMT1Q9H993 441 aa16.34■□□□□ 0.21
LDB3-204ENST00000372066 TFIP11Q9UBB9 837 aaKnown RBP16.34■□□□□ 0.21
LDB3-204ENST00000372066 ZNF70Q9UC06 446 aaPredicted RBP16.34■□□□□ 0.21
LDB3-204ENST00000372066 SLC4A4Q9Y6R1 1079 aa16.34■□□□□ 0.21
LDB3-204ENST00000372066 B4E1Z4 1266 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 IGF2BP3O00425 579 aaKnown RBP eCLIP16.33■□□□□ 0.2
LDB3-204ENST00000372066 PCP11498 1178 aaKnown RBP16.33■□□□□ 0.2
LDB3-204ENST00000372066 TNFAIP1Q13829 316 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 OTUD7BQ6GQQ9 843 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 APOA5Q6Q788 366 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 MFSD6Q6ZSS7 791 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 CYB5R4Q7L1T6 521 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 ZSCAN30Q86W11 494 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 VPS37DQ86XT2 251 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 ANKRD13AQ8IZ07 590 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 TMTC2Q8N394 836 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 FBXO18Q8NFZ0 1043 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 BICD2Q8TD16 824 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 CLSTN2Q9H4D0 955 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 CCDC39Q9UFE4 941 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 ANAPC4Q9UJX5 808 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 SERPINA10Q9UK55 444 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 ZNF646O15015 1829 aaPredicted RBP16.33■□□□□ 0.2
LDB3-204ENST00000372066 NEDD4P46934 1319 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 STK36Q9NRP7 1315 aa16.33■□□□□ 0.2
LDB3-204ENST00000372066 MAGEB6P1A0A0J9YX57 407 aa16.32■□□□□ 0.2
LDB3-204ENST00000372066 CTAGE5O15320 804 aa16.32■□□□□ 0.2
LDB3-204ENST00000372066 CYP7A1P22680 504 aa16.32■□□□□ 0.2
LDB3-204ENST00000372066 SPDYE2Q495Y8 402 aa16.32■□□□□ 0.2
LDB3-204ENST00000372066 GIMAP6Q6P9H5 292 aa16.32■□□□□ 0.2
LDB3-204ENST00000372066 FBXO33Q7Z6M2 555 aa16.32■□□□□ 0.2
LDB3-204ENST00000372066 LCORLQ8N3X6 602 aa16.32■□□□□ 0.2
LDB3-204ENST00000372066 RNF214Q8ND24 703 aa16.32■□□□□ 0.2
LDB3-204ENST00000372066 IGDCC4Q8TDY8 1250 aa16.32■□□□□ 0.2
LDB3-204ENST00000372066 TNMDQ9H2S6 317 aa16.32■□□□□ 0.2
LDB3-204ENST00000372066 GPHNQ9NQX3 736 aaPredicted RBP16.32■□□□□ 0.2
LDB3-204ENST00000372066 TRIM17Q9Y577 477 aa16.32■□□□□ 0.2
LDB3-204ENST00000372066 SSC5DA1L4H1 1573 aa16.32■□□□□ 0.2
LDB3-204ENST00000372066 MYH6P13533 1939 aa16.32■□□□□ 0.2
LDB3-204ENST00000372066 ZBTB43O43298 467 aa16.31■□□□□ 0.2
LDB3-204ENST00000372066 CAVIN2O95810 425 aa16.31■□□□□ 0.2
LDB3-204ENST00000372066 LIG1P18858 919 aa16.31■□□□□ 0.2
LDB3-204ENST00000372066 GJA5P36382 358 aa16.31■□□□□ 0.2
LDB3-204ENST00000372066 TMEM67Q5HYA8 995 aa16.31■□□□□ 0.2
LDB3-204ENST00000372066 SYNE3Q6ZMZ3 975 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms