RNA–Protein interactions for RNA: ENST00000369553.5

HIPK1-203, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 2,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-203ENST00000369553 TRIM7Q9C029 511 aa11.77□□□□□ -0.52
HIPK1-203ENST00000369553 CBX8Q9HC52 389 aa11.77□□□□□ -0.52
HIPK1-203ENST00000369553 COPRSQ9NQ92 184 aa11.77□□□□□ -0.52
HIPK1-203ENST00000369553 CCDC87Q9NVE4 849 aa11.77□□□□□ -0.52
HIPK1-203ENST00000369553 TPCN1Q9ULQ1 816 aa11.77□□□□□ -0.52
HIPK1-203ENST00000369553 LRRC23Q53EV4 343 aaPredicted RBP11.77□□□□□ -0.53
HIPK1-203ENST00000369553 SYCP3Q8IZU3 236 aa11.77□□□□□ -0.53
HIPK1-203ENST00000369553 SYNE4Q8N205 404 aa11.77□□□□□ -0.53
HIPK1-203ENST00000369553 OGFOD1Q8N543 542 aa11.77□□□□□ -0.53
HIPK1-203ENST00000369553 GPR161Q8N6U8 529 aaKnown RBP11.77□□□□□ -0.53
HIPK1-203ENST00000369553 TCP11Q8WWU5 503 aa11.77□□□□□ -0.53
HIPK1-203ENST00000369553 HDAC6Q9UBN7 1215 aa11.77□□□□□ -0.53
HIPK1-203ENST00000369553 ATRNO75882 1429 aa11.77□□□□□ -0.53
HIPK1-203ENST00000369553 BTAF1O14981 1849 aa11.77□□□□□ -0.53
HIPK1-203ENST00000369553 AHCYL1O43865 530 aa11.77□□□□□ -0.53
HIPK1-203ENST00000369553 RNF8O76064 485 aa11.77□□□□□ -0.53
HIPK1-203ENST00000369553 MAP4K4O95819 1239 aaPredicted RBP11.77□□□□□ -0.53
HIPK1-203ENST00000369553 FESP07332 822 aa11.77□□□□□ -0.53
HIPK1-203ENST00000369553 KCNQ4P56696 695 aa11.77□□□□□ -0.53
HIPK1-203ENST00000369553 CLASRPQ8N2M8 674 aaKnown RBP11.77□□□□□ -0.53
HIPK1-203ENST00000369553 CEP112Q8N8E3 955 aa11.77□□□□□ -0.53
HIPK1-203ENST00000369553 SMARCC1Q92922 1105 aaPredicted RBP11.77□□□□□ -0.53
HIPK1-203ENST00000369553 EAF2Q96CJ1 260 aaPredicted RBP11.77□□□□□ -0.53
HIPK1-203ENST00000369553 ATP6V0A4Q9HBG4 840 aa11.77□□□□□ -0.53
HIPK1-203ENST00000369553 USP42Q9H9J4 1324 aaKnown RBP11.77□□□□□ -0.53
HIPK1-203ENST00000369553 EPB41L2O43491 1005 aaKnown RBP11.76□□□□□ -0.53
HIPK1-203ENST00000369553 PAPOLAP51003 745 aaKnown RBP11.76□□□□□ -0.53
HIPK1-203ENST00000369553 CDC37Q16543 378 aaPredicted RBP11.76□□□□□ -0.53
HIPK1-203ENST00000369553 APBB1IPQ7Z5R6 666 aaPredicted RBP11.76□□□□□ -0.53
HIPK1-203ENST00000369553 AACSQ86V21 672 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 HOMER1Q86YM7 354 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 MFN1Q8IWA4 741 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 FAM89AQ96GI7 184 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 RBM41Q96IZ5 413 aaKnown RBP11.76□□□□□ -0.53
HIPK1-203ENST00000369553 DHRS1Q96LJ7 313 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 SCLT1Q96NL6 688 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 FRMD4BQ9Y2L6 1034 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 TMEM98Q9Y2Y6 226 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 STK24Q9Y6E0 443 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 SSBP05455 408 aaKnown RBP eCLIP11.76□□□□□ -0.53
HIPK1-203ENST00000369553 XBP1P17861 261 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 HSP90B2PQ58FF3 399 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 E4F1Q66K89 784 aaPredicted RBP11.76□□□□□ -0.53
HIPK1-203ENST00000369553 MIS18BP1Q6P0N0 1132 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 NOL8Q76FK4 1167 aaKnown RBP11.76□□□□□ -0.53
HIPK1-203ENST00000369553 NLRP10Q86W26 655 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 KCNN1Q92952 543 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 RILPL2Q969X0 211 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 TLR7Q9NYK1 1049 aaKnown RBP11.76□□□□□ -0.53
HIPK1-203ENST00000369553 RABL2BQ9UNT1 228 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 CHMP3Q9Y3E7 222 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 SAMM50Q9Y512 469 aa11.76□□□□□ -0.53
HIPK1-203ENST00000369553 NHSQ6T4R5 1651 aa11.75□□□□□ -0.53
HIPK1-203ENST00000369553 FIBPO43427 364 aa11.75□□□□□ -0.53
HIPK1-203ENST00000369553 PCCAP05165 728 aaPredicted RBP11.75□□□□□ -0.53
HIPK1-203ENST00000369553 GNPTABQ3T906 1256 aa11.75□□□□□ -0.53
HIPK1-203ENST00000369553 FAM81BQ96LP2 452 aa11.75□□□□□ -0.53
HIPK1-203ENST00000369553 TRAIPQ9BWF2 469 aa11.75□□□□□ -0.53
HIPK1-203ENST00000369553 CCDC8Q9H0W5 538 aaPredicted RBP11.75□□□□□ -0.53
HIPK1-203ENST00000369553 EHD4Q9H223 541 aa11.75□□□□□ -0.53
HIPK1-203ENST00000369553 ZNF831Q5JPB2 1677 aa11.75□□□□□ -0.53
HIPK1-203ENST00000369553 SBF2Q86WG5 1849 aa11.75□□□□□ -0.53
HIPK1-203ENST00000369553 UBE2HP62256 183 aa11.75□□□□□ -0.53
HIPK1-203ENST00000369553 ANO6Q4KMQ2 910 aa11.75□□□□□ -0.53
HIPK1-203ENST00000369553 VPS53Q5VIR6 699 aa11.75□□□□□ -0.53
HIPK1-203ENST00000369553 LINC00116Q8NCU8 138 aa11.75□□□□□ -0.53
HIPK1-203ENST00000369553 NEK9Q8TD19 979 aa11.75□□□□□ -0.53
HIPK1-203ENST00000369553 RSRC1Q96IZ7 334 aaKnown RBP11.75□□□□□ -0.53
HIPK1-203ENST00000369553 ERVV-1B6SEH8 477 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 OPA1O60313 960 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 NEMFO60524 1076 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 SYT1P21579 422 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 TYRO3Q06418 890 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 TFCP2Q12800 502 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 ACCSLQ4AC99 568 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 RBM26Q5T8P6 1007 aaKnown RBP11.74□□□□□ -0.53
HIPK1-203ENST00000369553 GALNT17Q6IS24 598 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 FAM228AQ86W67 206 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 SMCR8Q8TEV9 937 aaPredicted RBP11.74□□□□□ -0.53
HIPK1-203ENST00000369553 TAF4BQ92750 862 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 ZNF594Q96JF6 807 aaPredicted RBP11.74□□□□□ -0.53
HIPK1-203ENST00000369553 CENPOQ9BU64 300 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 PAPOLBQ9NRJ5 636 aaKnown RBP11.74□□□□□ -0.53
HIPK1-203ENST00000369553 FANCGO15287 622 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 FSBPO95073 299 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 IFIT2P09913 472 aaKnown RBP11.74□□□□□ -0.53
HIPK1-203ENST00000369553 GNAT1P11488 350 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 CAMK4Q16566 473 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 LRRFIP1Q32MZ4 808 aaKnown RBP11.74□□□□□ -0.53
HIPK1-203ENST00000369553 HDXQ7Z353 690 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 TTC30AQ86WT1 665 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 FAM114A1Q8IWE2 563 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 ZBTB38Q8NAP3 1195 aaPredicted RBP11.74□□□□□ -0.53
HIPK1-203ENST00000369553 FAM71BQ8TC56 605 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 AFAP1L1Q8TED9 768 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 TTC41PQ6P2S7 1318 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 UBN2Q6ZU65 1347 aa11.74□□□□□ -0.53
HIPK1-203ENST00000369553 SLC27A2O14975 620 aa11.73□□□□□ -0.53
HIPK1-203ENST00000369553 ONECUT3O60422 494 aaPredicted RBP11.73□□□□□ -0.53
HIPK1-203ENST00000369553 SFSWAPQ12872 951 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms