RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 HAND2P61296 217 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 FOXO4P98177 505 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 LMBR1LQ6UX01 489 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 TRAPPC11Q7Z392 1133 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 ATRIPQ8WXE1 791 aa11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 SMARCC1Q92922 1105 aaPredicted RBP11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 CDC5LQ99459 802 aaKnown RBP11.91□□□□□ -0.5
LYSMD1-201ENST00000368908 PHACTR2O75167 634 aa11.9□□□□□ -0.5
LYSMD1-201ENST00000368908 GYPCP04921 128 aa11.9□□□□□ -0.5
LYSMD1-201ENST00000368908 MYL6BP14649 208 aa11.9□□□□□ -0.5
LYSMD1-201ENST00000368908 USP8P40818 1118 aa11.9□□□□□ -0.5
LYSMD1-201ENST00000368908 GSCP56915 257 aaPredicted RBP11.9□□□□□ -0.5
LYSMD1-201ENST00000368908 CUL4BQ13620 913 aa11.9□□□□□ -0.5
LYSMD1-201ENST00000368908 CYP26C1Q6V0L0 522 aa11.9□□□□□ -0.5
LYSMD1-201ENST00000368908 NOSTRINQ8IVI9 506 aa11.9□□□□□ -0.5
LYSMD1-201ENST00000368908 COG1Q8WTW3 980 aa11.9□□□□□ -0.5
LYSMD1-201ENST00000368908 WASF1Q92558 559 aa11.9□□□□□ -0.5
LYSMD1-201ENST00000368908 ZBTB9Q96C00 473 aa11.9□□□□□ -0.5
LYSMD1-201ENST00000368908 ZNF213O14771 459 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 POLR2DO15514 142 aaKnown RBP11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 STIM1Q13586 685 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 NTRK3Q16288 839 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 APOA5Q6Q788 366 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 TMEM87BQ96K49 555 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 CHD4Q14839 1912 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 PKD1L3Q7Z443 1732 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 H7C1W4 665 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 EYA2O00167 538 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 PSMD14O00487 310 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 CASP14P31944 242 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 IARSP41252 1262 aaKnown RBP11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 CKAP4Q07065 602 aaKnown RBP11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 ZNF827Q17R98 1081 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 NBPF14Q5TI25 921 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 GBP6Q6ZN66 633 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 PAXIP1Q6ZW49 1069 aaPredicted RBP11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 POTEDQ86YR6 584 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 RAB11FIP4Q86YS3 637 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 ACRBPQ8NEB7 543 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 RUBCNQ92622 972 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 NLRP2Q9NX02 1062 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 SRPRBQ9Y5M8 271 aaKnown RBP11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 UBN2Q6ZU65 1347 aa11.89□□□□□ -0.51
LYSMD1-201ENST00000368908 ERLIN2O94905 339 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 TIMM10P62072 90 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 ERVK-24P63145 666 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 RILPL1Q5EBL4 403 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 ZNF662Q6ZS27 426 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 RPAINQ86UA6 219 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 SGMS1Q86VZ5 419 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 FAM76AQ8TAV0 307 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 CEP131Q9UPN4 1083 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 BRWD3Q6RI45 1802 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 FXR1P51114 621 aaKnown RBP eCLIP11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 PPFIA1Q13136 1202 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 MICALL1Q8N3F8 863 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 PLBD2Q8NHP8 589 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 FOXP1Q9H334 677 aaPredicted RBP11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 SLC52A2Q9HAB3 445 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 ABHD10Q9NUJ1 306 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 LIMA1Q9UHB6 759 aaKnown RBP11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 IQSEC3Q9UPP2 1182 aaPredicted RBP11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 TBC1D2BQ9UPU7 963 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 MYH13Q9UKX3 1938 aa11.88□□□□□ -0.51
LYSMD1-201ENST00000368908 A6NNZ2 444 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 EXOC5O00471 708 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 ZBTB43O43298 467 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 RANBP6O60518 1105 aaKnown RBP11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 TOB1P50616 345 aaPredicted RBP11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 SPAG1Q07617 926 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 SAFBQ15424 915 aaKnown RBP eCLIP11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 WASHC4Q2M389 1173 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 TUBB8Q3ZCM7 444 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 SH3RF1Q7Z6J0 888 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 HAUS4Q9H6D7 363 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 TIAM2Q8IVF5 1701 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 LOC102724159A0A0B4J2E5 919 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 EBAG9O00559 213 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 MMP1P03956 469 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 SSRP1Q08945 709 aaKnown RBP11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 PWP2Q15269 919 aaKnown RBP11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 PAPD7Q5XG87 772 aaKnown RBP11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 NCAPH2Q6IBW4 605 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 CPLX3Q8WVH0 158 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 CRACR2AQ9BSW2 395 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 NBPF3Q9H094 633 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 TNS2Q63HR2 1409 aa11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 GOLGB1Q14789 3259 aaKnown RBP11.87□□□□□ -0.51
LYSMD1-201ENST00000368908 LRRC10BA6NIK2 292 aa11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 GOLGA8AA7E2F4 631 aa11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 TFRCP02786 760 aaKnown RBP11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 SNRPA1P09661 255 aaKnown RBP11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 AKAP17AQ02040 695 aaKnown RBP11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 FAM98CQ17RN3 349 aaKnown RBP11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 CYB5R4Q7L1T6 521 aa11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 EHBP1Q8NDI1 1231 aa11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 PHKBQ93100 1093 aa11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 GSDMAQ96QA5 445 aa11.86□□□□□ -0.51
LYSMD1-201ENST00000368908 TOMM22Q9NS69 142 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms