RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 CIAPIN1Q6FI81 312 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 VTI1AQ96AJ9 217 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 TBC1D32Q96NH3 1257 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 IPO9Q96P70 1041 aaKnown RBP10.57□□□□□ -0.72
TPM3-213ENST00000368545 FAM129BQ96TA1 746 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 PSMD1Q99460 953 aa10.57□□□□□ -0.72
TPM3-213ENST00000368545 A0A1W2PRU2 124 aa10.56□□□□□ -0.72
TPM3-213ENST00000368545 GOLGA8CPA6NN73 597 aa10.56□□□□□ -0.72
TPM3-213ENST00000368545 AOC2O75106 756 aa10.56□□□□□ -0.72
TPM3-213ENST00000368545 GLRX3O76003 335 aaKnown RBP10.56□□□□□ -0.72
TPM3-213ENST00000368545 IL15P40933 162 aaPredicted RBP10.56□□□□□ -0.72
TPM3-213ENST00000368545 TNNI2P48788 182 aa10.56□□□□□ -0.72
TPM3-213ENST00000368545 CTSWP56202 376 aa10.56□□□□□ -0.72
TPM3-213ENST00000368545 UTP14AQ9BVJ6 771 aaKnown RBP10.56□□□□□ -0.72
TPM3-213ENST00000368545 CCSER2Q9H7U1 834 aa10.56□□□□□ -0.72
TPM3-213ENST00000368545 SH3TC1Q8TE82 1336 aa10.56□□□□□ -0.72
TPM3-213ENST00000368545 CARMIL3Q8ND23 1372 aa10.56□□□□□ -0.72
TPM3-213ENST00000368545 IRS4O14654 1257 aaPredicted RBP10.55□□□□□ -0.72
TPM3-213ENST00000368545 TNFRSF10BO14763 440 aa10.55□□□□□ -0.72
TPM3-213ENST00000368545 ADH1BP00325 375 aa10.55□□□□□ -0.72
TPM3-213ENST00000368545 IFIT5Q13325 482 aaKnown RBP10.55□□□□□ -0.72
TPM3-213ENST00000368545 USPL1Q5W0Q7 1092 aa10.55□□□□□ -0.72
TPM3-213ENST00000368545 AACSQ86V21 672 aa10.55□□□□□ -0.72
TPM3-213ENST00000368545 KLHDC4Q8TBB5 520 aa10.55□□□□□ -0.72
TPM3-213ENST00000368545 PI4K2BQ8TCG2 481 aa10.55□□□□□ -0.72
TPM3-213ENST00000368545 ADARB2Q9NS39 739 aaKnown RBP10.55□□□□□ -0.72
TPM3-213ENST00000368545 ECHDC1Q9NTX5 307 aa10.55□□□□□ -0.72
TPM3-213ENST00000368545 SRP68Q9UHB9 627 aaKnown RBP10.55□□□□□ -0.72
TPM3-213ENST00000368545 NIP7Q9Y221 180 aaKnown RBP eCLIP10.55□□□□□ -0.72
TPM3-213ENST00000368545 A0A1W2PPC1 479 aa10.55□□□□□ -0.72
TPM3-213ENST00000368545 ANKRD62A6NC57 917 aa10.55□□□□□ -0.72
TPM3-213ENST00000368545 IARSP41252 1262 aaKnown RBP10.55□□□□□ -0.72
TPM3-213ENST00000368545 FGD1P98174 961 aa10.55□□□□□ -0.72
TPM3-213ENST00000368545 COX20Q5RI15 118 aa10.55□□□□□ -0.72
TPM3-213ENST00000368545 CST9Q5W186 159 aa10.55□□□□□ -0.72
TPM3-213ENST00000368545 SLC43A3Q8NBI5 491 aa10.55□□□□□ -0.72
TPM3-213ENST00000368545 CASP8AP2Q9UKL3 1982 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 EYA2O00167 538 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 CAPN2P17655 700 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 ZNF76P36508 570 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 GDF10P55107 478 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 TSHZ3Q63HK5 1081 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 TRMT44Q8IYL2 757 aaKnown RBP10.54□□□□□ -0.72
TPM3-213ENST00000368545 KCTD15Q96SI1 283 aaPredicted RBP10.54□□□□□ -0.72
TPM3-213ENST00000368545 C22orf23Q9BZE7 217 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 GPR108Q9NPR9 543 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 STIM2Q9P246 746 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 NPR1P16066 1061 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 TNNI3KQ59H18 835 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 TAF7LQ5H9L4 462 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 SUSD4Q5VX71 490 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 ZNF662Q6ZS27 426 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 CDC37L1Q7L3B6 337 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 TTLL11Q8NHH1 800 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 EAF2Q96CJ1 260 aaPredicted RBP10.54□□□□□ -0.72
TPM3-213ENST00000368545 SERTAD1Q9UHV2 236 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 HDAC9Q9UKV0 1011 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 FPGT-TNNI3KV9GXZ4 949 aa10.54□□□□□ -0.72
TPM3-213ENST00000368545 ZNF609O15014 1411 aa10.53□□□□□ -0.72
TPM3-213ENST00000368545 ANKRD18BA2A2Z9 1011 aa10.53□□□□□ -0.72
TPM3-213ENST00000368545 CELF2O95319 508 aaKnown RBP10.53□□□□□ -0.72
TPM3-213ENST00000368545 NTSR2O95665 410 aa10.53□□□□□ -0.72
TPM3-213ENST00000368545 NCLP19338 710 aaKnown RBP10.53□□□□□ -0.72
TPM3-213ENST00000368545 ALDH1B1P30837 517 aa10.53□□□□□ -0.72
TPM3-213ENST00000368545 GTF2F1P35269 517 aaKnown RBP eCLIP10.53□□□□□ -0.72
TPM3-213ENST00000368545 TFCP2Q12800 502 aa10.53□□□□□ -0.72
TPM3-213ENST00000368545 RGMBQ6NW40 437 aa10.53□□□□□ -0.72
TPM3-213ENST00000368545 PRPF40BQ6NWY9 871 aaKnown RBP10.53□□□□□ -0.72
TPM3-213ENST00000368545 ATG9AQ7Z3C6 839 aa10.53□□□□□ -0.72
TPM3-213ENST00000368545 RILPL2Q969X0 211 aa10.53□□□□□ -0.72
TPM3-213ENST00000368545 IQSEC3Q9UPP2 1182 aaPredicted RBP10.53□□□□□ -0.72
TPM3-213ENST00000368545 AKAP11Q9UKA4 1901 aa10.53□□□□□ -0.72
TPM3-213ENST00000368545 RTL9Q8NET4 1388 aa10.53□□□□□ -0.72
TPM3-213ENST00000368545 ZNF541Q9H0D2 1346 aa10.53□□□□□ -0.72
TPM3-213ENST00000368545 ERVH48-1M5A8F1 160 aa10.52□□□□□ -0.72
TPM3-213ENST00000368545 BACH1O14867 736 aa10.52□□□□□ -0.72
TPM3-213ENST00000368545 ZBTB39O15060 712 aa10.52□□□□□ -0.72
TPM3-213ENST00000368545 REC8O95072 547 aa10.52□□□□□ -0.72
TPM3-213ENST00000368545 ATP2B1P20020 1258 aa10.52□□□□□ -0.72
TPM3-213ENST00000368545 TBCELQ5QJ74 424 aa10.52□□□□□ -0.72
TPM3-213ENST00000368545 ALKBH2Q6NS38 261 aa10.52□□□□□ -0.72
TPM3-213ENST00000368545 ALKBH8Q96BT7 664 aaKnown RBP10.52□□□□□ -0.72
TPM3-213ENST00000368545 CFHR5Q9BXR6 569 aa10.52□□□□□ -0.72
TPM3-213ENST00000368545 NYXQ9GZU5 481 aa10.52□□□□□ -0.72
TPM3-213ENST00000368545 CUEDC1Q9NWM3 386 aaPredicted RBP10.52□□□□□ -0.72
TPM3-213ENST00000368545 RNF186Q9NXI6 227 aa10.52□□□□□ -0.72
TPM3-213ENST00000368545 CDV3Q9UKY7 258 aaKnown RBP10.52□□□□□ -0.72
TPM3-213ENST00000368545 SPEF2Q9C093 1822 aa10.52□□□□□ -0.73
TPM3-213ENST00000368545 ANKRD31Q8N7Z5 1873 aa10.52□□□□□ -0.73
TPM3-213ENST00000368545 ITGA6P23229 1130 aa10.52□□□□□ -0.73
TPM3-213ENST00000368545 ATP2B2Q01814 1243 aa10.52□□□□□ -0.73
TPM3-213ENST00000368545 FAM26DQ5JW98 314 aa10.52□□□□□ -0.73
TPM3-213ENST00000368545 ATCAYQ86WG3 371 aa10.52□□□□□ -0.73
TPM3-213ENST00000368545 WNT2BQ93097 391 aa10.52□□□□□ -0.73
TPM3-213ENST00000368545 NIF3L1Q9GZT8 377 aa10.52□□□□□ -0.73
TPM3-213ENST00000368545 AKAP2Q9Y2D5 859 aa10.52□□□□□ -0.73
TPM3-213ENST00000368545 ARAP2Q8WZ64 1704 aa10.51□□□□□ -0.73
TPM3-213ENST00000368545 SRGNP10124 158 aa10.51□□□□□ -0.73
TPM3-213ENST00000368545 ERVK-9P63128 1117 aa10.51□□□□□ -0.73
TPM3-213ENST00000368545 CCDC152Q4G0S7 254 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms