RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 RESP18Q5W5W9 173 aa17.16■□□□□ 0.34
GABPB1-202ENST00000359031 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.16■□□□□ 0.34
GABPB1-202ENST00000359031 C11orf57Q6ZUT1 292 aaPredicted RBP17.16■□□□□ 0.34
GABPB1-202ENST00000359031 CTCFLQ8NI51 663 aaPredicted RBP17.16■□□□□ 0.34
GABPB1-202ENST00000359031 KCNJ14Q9UNX9 436 aa17.16■□□□□ 0.34
GABPB1-202ENST00000359031 MORC2Q9Y6X9 1032 aaPredicted RBP17.16■□□□□ 0.34
GABPB1-202ENST00000359031 CNTNAP5Q8WYK1 1306 aa17.15■□□□□ 0.34
GABPB1-202ENST00000359031 TSPY2A6NKD2 308 aa17.15■□□□□ 0.34
GABPB1-202ENST00000359031 KIAA2012Q0VF49 1180 aa17.15■□□□□ 0.34
GABPB1-202ENST00000359031 SARM1Q6SZW1 724 aa17.15■□□□□ 0.34
GABPB1-202ENST00000359031 CMTR1Q8N1G2 835 aaKnown RBP17.15■□□□□ 0.34
GABPB1-202ENST00000359031 SH3RF3Q8TEJ3 882 aaPredicted RBP17.15■□□□□ 0.34
GABPB1-202ENST00000359031 TBC1D22AQ8WUA7 517 aa17.15■□□□□ 0.34
GABPB1-202ENST00000359031 RTFDC1Q9BY42 306 aaPredicted RBP17.15■□□□□ 0.34
GABPB1-202ENST00000359031 KIAA1468Q9P260 1216 aa17.15■□□□□ 0.34
GABPB1-202ENST00000359031 OFD1O75665 1012 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 USP17L8P0C7I0 530 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 SYKP43405 635 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 ZRSR1Q15695 479 aaKnown RBP17.14■□□□□ 0.33
GABPB1-202ENST00000359031 PKN1Q16512 942 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 SHC4Q6S5L8 630 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 PLA2G4DQ86XP0 818 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 SLF2Q8IX21 1173 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 CCDC82Q8N4S0 544 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 KRI1Q8N9T8 703 aaKnown RBP17.14■□□□□ 0.33
GABPB1-202ENST00000359031 TBC1D16Q8TBP0 767 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 GPR101Q96P66 508 aaPredicted RBP17.14■□□□□ 0.33
GABPB1-202ENST00000359031 TAOK2Q9UL54 1235 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 CEP131Q9UPN4 1083 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 COL11A2P13942 1736 aaPredicted RBP17.14■□□□□ 0.33
GABPB1-202ENST00000359031 PPEF1O14829 653 aaPredicted RBP17.14■□□□□ 0.33
GABPB1-202ENST00000359031 PLEKHA8P1O95397 391 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 PLCG2P16885 1265 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 CDC25BP30305 580 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 KRT2P35908 639 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 ZNF75DP51815 510 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 EVX2Q03828 476 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 DIXDC1Q155Q3 683 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 FAM47AQ5JRC9 791 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 ANKS1AQ92625 1134 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 BPIFA3Q9BQP9 254 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 PHF20Q9BVI0 1012 aa17.14■□□□□ 0.33
GABPB1-202ENST00000359031 CEP350Q5VT06 3117 aa17.13■□□□□ 0.33
GABPB1-202ENST00000359031 MYH1P12882 1939 aa17.13■□□□□ 0.33
GABPB1-202ENST00000359031 KIF5BP33176 963 aa17.13■□□□□ 0.33
GABPB1-202ENST00000359031 TOB1P50616 345 aaPredicted RBP17.13■□□□□ 0.33
GABPB1-202ENST00000359031 GRIK5Q16478 980 aa17.13■□□□□ 0.33
GABPB1-202ENST00000359031 DGKHQ86XP1 1220 aa17.13■□□□□ 0.33
GABPB1-202ENST00000359031 SP8Q8IXZ3 490 aa17.13■□□□□ 0.33
GABPB1-202ENST00000359031 BRMS1Q9HCU9 246 aa17.13■□□□□ 0.33
GABPB1-202ENST00000359031 FAM205AQ6ZU69 1335 aa17.12■□□□□ 0.33
GABPB1-202ENST00000359031 GPR75-ASB3A0A0A6YYF3 556 aa17.12■□□□□ 0.33
GABPB1-202ENST00000359031 BECN2A8MW95 431 aa17.12■□□□□ 0.33
GABPB1-202ENST00000359031 BTDP43251 543 aa17.12■□□□□ 0.33
GABPB1-202ENST00000359031 ELOA2Q8IYF1 753 aaPredicted RBP17.12■□□□□ 0.33
GABPB1-202ENST00000359031 FAM163AQ96GL9 167 aaPredicted RBP17.12■□□□□ 0.33
GABPB1-202ENST00000359031 TRIM5Q9C035 493 aa17.12■□□□□ 0.33
GABPB1-202ENST00000359031 ZNF287Q9HBT7 754 aa17.12■□□□□ 0.33
GABPB1-202ENST00000359031 TCP11L1Q9NUJ3 509 aa17.12■□□□□ 0.33
GABPB1-202ENST00000359031 GAKO14976 1311 aa17.12■□□□□ 0.33
GABPB1-202ENST00000359031 NMT2O60551 498 aa17.11■□□□□ 0.33
GABPB1-202ENST00000359031 NLRP12P59046 1061 aa17.11■□□□□ 0.33
GABPB1-202ENST00000359031 NR5A1Q13285 461 aa17.11■□□□□ 0.33
GABPB1-202ENST00000359031 RCSD1Q6JBY9 416 aa17.11■□□□□ 0.33
GABPB1-202ENST00000359031 DHX40Q8IX18 779 aaKnown RBP17.11■□□□□ 0.33
GABPB1-202ENST00000359031 NLGN1Q8N2Q7 840 aa17.11■□□□□ 0.33
GABPB1-202ENST00000359031 ZNF579Q8NAF0 562 aaKnown RBP17.11■□□□□ 0.33
GABPB1-202ENST00000359031 KAT14Q9H8E8 782 aa17.11■□□□□ 0.33
GABPB1-202ENST00000359031 VPS54Q9P1Q0 977 aa17.11■□□□□ 0.33
GABPB1-202ENST00000359031 POLLQ9UGP5 575 aa17.11■□□□□ 0.33
GABPB1-202ENST00000359031 FBXO2Q9UK22 296 aaPredicted RBP17.11■□□□□ 0.33
GABPB1-202ENST00000359031 BMP15O95972 392 aa17.1■□□□□ 0.33
GABPB1-202ENST00000359031 PTPREP23469 700 aa17.1■□□□□ 0.33
GABPB1-202ENST00000359031 TFAP4Q01664 338 aa17.1■□□□□ 0.33
GABPB1-202ENST00000359031 OXER1Q8TDS5 423 aa17.1■□□□□ 0.33
GABPB1-202ENST00000359031 TGFBRAP1Q8WUH2 860 aa17.1■□□□□ 0.33
GABPB1-202ENST00000359031 PIBF1Q8WXW3 757 aa17.1■□□□□ 0.33
GABPB1-202ENST00000359031 SHISA4Q96DD7 197 aa17.1■□□□□ 0.33
GABPB1-202ENST00000359031 FAM13BQ9NYF5 915 aa17.1■□□□□ 0.33
GABPB1-202ENST00000359031 ATP6V0A2Q9Y487 856 aa17.1■□□□□ 0.33
GABPB1-202ENST00000359031 V9GY48 417 aaPredicted RBP17.1■□□□□ 0.33
GABPB1-202ENST00000359031 MFSD14BQ5SR56 506 aa17.1■□□□□ 0.33
GABPB1-202ENST00000359031 SRBD1Q8N5C6 995 aaKnown RBP17.1■□□□□ 0.33
GABPB1-202ENST00000359031 MRFAP1L1Q96HT8 127 aa17.1■□□□□ 0.33
GABPB1-202ENST00000359031 CLIC6Q96NY7 704 aa17.1■□□□□ 0.33
GABPB1-202ENST00000359031 TTC12Q9H892 705 aaPredicted RBP17.1■□□□□ 0.33
GABPB1-202ENST00000359031 MKNK2Q9HBH9 465 aa17.1■□□□□ 0.33
GABPB1-202ENST00000359031 TUBE1Q9UJT0 475 aa17.1■□□□□ 0.33
GABPB1-202ENST00000359031 SUGT1Q9Y2Z0 365 aa17.1■□□□□ 0.33
GABPB1-202ENST00000359031 SNED1Q8TER0 1413 aa17.09■□□□□ 0.33
GABPB1-202ENST00000359031 C6orf229H3BNL8 230 aa17.09■□□□□ 0.33
GABPB1-202ENST00000359031 SCG2P13521 617 aa17.09■□□□□ 0.33
GABPB1-202ENST00000359031 GNAQP50148 359 aa17.09■□□□□ 0.33
GABPB1-202ENST00000359031 GRM4Q14833 912 aa17.09■□□□□ 0.33
GABPB1-202ENST00000359031 TEX11Q8IYF3 940 aa17.09■□□□□ 0.33
GABPB1-202ENST00000359031 SPC24Q8NBT2 197 aa17.09■□□□□ 0.33
GABPB1-202ENST00000359031 NAP1L5Q96NT1 182 aaPredicted RBP17.09■□□□□ 0.33
GABPB1-202ENST00000359031 COA1Q9GZY4 146 aa17.09■□□□□ 0.33
GABPB1-202ENST00000359031 HOOK1Q9UJC3 728 aaKnown RBP17.09■□□□□ 0.33
GABPB1-202ENST00000359031 KCNH3Q9ULD8 1083 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms