RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 A0A0D9SFI3 127 aa20.35■□□□□ 0.85
FAM3D-201ENST00000358781 AKR1B1P15121 316 aa20.35■□□□□ 0.85
FAM3D-201ENST00000358781 ARHGEF6Q15052 776 aa20.35■□□□□ 0.85
FAM3D-201ENST00000358781 FBXO46Q6PJ61 603 aaPredicted RBP20.35■□□□□ 0.85
FAM3D-201ENST00000358781 ACER1Q8TDN7 264 aa20.35■□□□□ 0.85
FAM3D-201ENST00000358781 SMCR8Q8TEV9 937 aaPredicted RBP20.35■□□□□ 0.85
FAM3D-201ENST00000358781 KIAA1683Q9H0B3 1180 aa20.35■□□□□ 0.85
FAM3D-201ENST00000358781 EMILIN3Q9NT22 766 aa20.35■□□□□ 0.85
FAM3D-201ENST00000358781 ZSWIM8A7E2V4 1837 aa20.34■□□□□ 0.85
FAM3D-201ENST00000358781 FOXP2O15409 715 aa20.34■□□□□ 0.85
FAM3D-201ENST00000358781 OSBPP22059 807 aa20.34■□□□□ 0.85
FAM3D-201ENST00000358781 HOXA7P31268 230 aaPredicted RBP20.34■□□□□ 0.85
FAM3D-201ENST00000358781 USP14P54578 494 aa20.34■□□□□ 0.85
FAM3D-201ENST00000358781 NMIQ13287 307 aaPredicted RBP20.34■□□□□ 0.85
FAM3D-201ENST00000358781 KIF22Q14807 665 aa20.34■□□□□ 0.85
FAM3D-201ENST00000358781 MCMDC2Q4G0Z9 681 aa20.34■□□□□ 0.85
FAM3D-201ENST00000358781 C12orf42Q96LP6 360 aa20.34■□□□□ 0.85
FAM3D-201ENST00000358781 ARHGAP39Q9C0H5 1083 aa20.34■□□□□ 0.85
FAM3D-201ENST00000358781 NAPBQ9H115 298 aa20.34■□□□□ 0.85
FAM3D-201ENST00000358781 ASCC2Q9H1I8 757 aaPredicted RBP20.34■□□□□ 0.85
FAM3D-201ENST00000358781 CENPFP49454 3210 aa20.34■□□□□ 0.85
FAM3D-201ENST00000358781 SDSP20132 328 aa20.33■□□□□ 0.85
FAM3D-201ENST00000358781 ZYXQ15942 572 aaKnown RBP20.33■□□□□ 0.85
FAM3D-201ENST00000358781 VPS53Q5VIR6 699 aa20.32■□□□□ 0.84
FAM3D-201ENST00000358781 STK11IPQ8N1F8 1099 aa20.32■□□□□ 0.84
FAM3D-201ENST00000358781 MKNK2Q9HBH9 465 aa20.32■□□□□ 0.84
FAM3D-201ENST00000358781 HPS5Q9UPZ3 1129 aa20.32■□□□□ 0.84
FAM3D-201ENST00000358781 A0A1W2PRG0 241 aa20.31■□□□□ 0.84
FAM3D-201ENST00000358781 CCDC85CA6NKD9 419 aa20.31■□□□□ 0.84
FAM3D-201ENST00000358781 RASA1P20936 1047 aa20.31■□□□□ 0.84
FAM3D-201ENST00000358781 GCLCP48506 637 aaPredicted RBP20.31■□□□□ 0.84
FAM3D-201ENST00000358781 IRX3P78415 501 aaPredicted RBP20.31■□□□□ 0.84
FAM3D-201ENST00000358781 TTC22Q5TAA0 569 aa20.31■□□□□ 0.84
FAM3D-201ENST00000358781 PTPN22Q9Y2R2 807 aa20.31■□□□□ 0.84
FAM3D-201ENST00000358781 GREB1LQ9C091 1923 aaPredicted RBP20.31■□□□□ 0.84
FAM3D-201ENST00000358781 MGAMO43451 1857 aa20.3■□□□□ 0.84
FAM3D-201ENST00000358781 GNRH1P01148 92 aa20.3■□□□□ 0.84
FAM3D-201ENST00000358781 CTGFP29279 349 aa20.3■□□□□ 0.84
FAM3D-201ENST00000358781 PSMC4P43686 418 aa20.3■□□□□ 0.84
FAM3D-201ENST00000358781 ICA1Q05084 483 aa20.3■□□□□ 0.84
FAM3D-201ENST00000358781 PPARAQ07869 468 aa20.3■□□□□ 0.84
FAM3D-201ENST00000358781 ALX1Q15699 326 aa20.3■□□□□ 0.84
FAM3D-201ENST00000358781 ZNF589Q86UQ0 364 aaPredicted RBP20.3■□□□□ 0.84
FAM3D-201ENST00000358781 CLEC10AQ8IUN9 316 aa20.3■□□□□ 0.84
FAM3D-201ENST00000358781 SIAH1Q8IUQ4 282 aa20.3■□□□□ 0.84
FAM3D-201ENST00000358781 ANKRD13CQ8N6S4 541 aa20.3■□□□□ 0.84
FAM3D-201ENST00000358781 TRIM47Q96LD4 638 aa20.3■□□□□ 0.84
FAM3D-201ENST00000358781 ZNF287Q9HBT7 754 aa20.3■□□□□ 0.84
FAM3D-201ENST00000358781 CCDC171Q6TFL3 1326 aa20.3■□□□□ 0.84
FAM3D-201ENST00000358781 HIP1O00291 1037 aa20.29■□□□□ 0.84
FAM3D-201ENST00000358781 GSPT1P15170 499 aaKnown RBP20.29■□□□□ 0.84
FAM3D-201ENST00000358781 VCAM1P19320 739 aa20.29■□□□□ 0.84
FAM3D-201ENST00000358781 FAM110CQ1W6H9 321 aa20.29■□□□□ 0.84
FAM3D-201ENST00000358781 P2RX7Q99572 595 aaKnown RBP20.29■□□□□ 0.84
FAM3D-201ENST00000358781 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.29■□□□□ 0.84
FAM3D-201ENST00000358781 KANSL2Q9H9L4 492 aa20.29■□□□□ 0.84
FAM3D-201ENST00000358781 ARHGEF10LQ9HCE6 1279 aa20.29■□□□□ 0.84
FAM3D-201ENST00000358781 DIAPH3Q9NSV4 1193 aa20.29■□□□□ 0.84
FAM3D-201ENST00000358781 USP17L15C9J2P7 530 aa20.28■□□□□ 0.84
FAM3D-201ENST00000358781 USP17L13C9JLJ4 530 aa20.28■□□□□ 0.84
FAM3D-201ENST00000358781 USP17L11C9JVI0 530 aa20.28■□□□□ 0.84
FAM3D-201ENST00000358781 USP17L18D6R9N7 530 aa20.28■□□□□ 0.84
FAM3D-201ENST00000358781 USP17L22D6RA61 530 aa20.28■□□□□ 0.84
FAM3D-201ENST00000358781 USP17L17D6RBQ6 530 aa20.28■□□□□ 0.84
FAM3D-201ENST00000358781 USP17L19D6RCP7 530 aa20.28■□□□□ 0.84
FAM3D-201ENST00000358781 USP17L20D6RJB6 530 aa20.28■□□□□ 0.84
FAM3D-201ENST00000358781 ECM2O94769 699 aaPredicted RBP20.28■□□□□ 0.84
FAM3D-201ENST00000358781 FMNL1O95466 1100 aaPredicted RBP20.28■□□□□ 0.84
FAM3D-201ENST00000358781 SLC3A2P08195 630 aaKnown RBP20.28■□□□□ 0.84
FAM3D-201ENST00000358781 HERVK_113P62684 666 aa20.28■□□□□ 0.84
FAM3D-201ENST00000358781 USP17L24Q0WX57 530 aa20.28■□□□□ 0.84
FAM3D-201ENST00000358781 SH2D4AQ9H788 454 aa20.28■□□□□ 0.84
FAM3D-201ENST00000358781 TMX2Q9Y320 296 aa20.28■□□□□ 0.84
FAM3D-201ENST00000358781 PRDM1O75626 825 aa20.27■□□□□ 0.84
FAM3D-201ENST00000358781 HSPD1P10809 573 aaKnown RBP20.27■□□□□ 0.84
FAM3D-201ENST00000358781 MFAP1P55081 439 aaKnown RBP20.27■□□□□ 0.84
FAM3D-201ENST00000358781 FCGRTP55899 365 aa20.27■□□□□ 0.84
FAM3D-201ENST00000358781 PDE4BQ07343 736 aa20.27■□□□□ 0.84
FAM3D-201ENST00000358781 CWC27Q6UX04 472 aaKnown RBP20.27■□□□□ 0.84
FAM3D-201ENST00000358781 CENPQQ7L2Z9 268 aaPredicted RBP20.27■□□□□ 0.84
FAM3D-201ENST00000358781 ZNF444Q8N0Y2 327 aaPredicted RBP20.27■□□□□ 0.84
FAM3D-201ENST00000358781 EEF2P13639 858 aaKnown RBP20.27■□□□□ 0.83
FAM3D-201ENST00000358781 HOXD10P28358 340 aa20.27■□□□□ 0.83
FAM3D-201ENST00000358781 PRMT2P55345 433 aa20.27■□□□□ 0.83
FAM3D-201ENST00000358781 CATSPERGQ6ZRH7 1159 aa20.27■□□□□ 0.83
FAM3D-201ENST00000358781 RPAP3Q9H6T3 665 aaPredicted RBP20.27■□□□□ 0.83
FAM3D-201ENST00000358781 MORF4L1Q9UBU8 362 aa20.27■□□□□ 0.83
FAM3D-201ENST00000358781 ANAPC4Q9UJX5 808 aa20.27■□□□□ 0.83
FAM3D-201ENST00000358781 PTCH2Q9Y6C5 1203 aa20.27■□□□□ 0.83
FAM3D-201ENST00000358781 ZMYM6O95789 1325 aa20.26■□□□□ 0.83
FAM3D-201ENST00000358781 FGAP02671 866 aa20.26■□□□□ 0.83
FAM3D-201ENST00000358781 ATP2B2Q01814 1243 aa20.26■□□□□ 0.83
FAM3D-201ENST00000358781 CTDSPL2Q05D32 466 aa20.26■□□□□ 0.83
FAM3D-201ENST00000358781 KIAA1755Q5JYT7 1200 aa20.26■□□□□ 0.83
FAM3D-201ENST00000358781 GTF3C2Q8WUA4 911 aaPredicted RBP20.26■□□□□ 0.83
FAM3D-201ENST00000358781 LPAR1Q92633 364 aa20.26■□□□□ 0.83
FAM3D-201ENST00000358781 VCPKMTQ9H867 229 aa20.26■□□□□ 0.83
FAM3D-201ENST00000358781 SRRDQ9UH36 339 aa20.26■□□□□ 0.83
FAM3D-201ENST00000358781 DOCK3Q8IZD9 2030 aa20.25■□□□□ 0.83
FAM3D-201ENST00000358781 IGKV6D-41A0A0C4DH26 115 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms