RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 BLOC1S2Q6QNY1 142 aa17.52■□□□□ 0.4
CCNE1-202ENST00000357943 IQCA1Q86XH1 822 aa17.52■□□□□ 0.4
CCNE1-202ENST00000357943 SIAH1Q8IUQ4 282 aa17.52■□□□□ 0.4
CCNE1-202ENST00000357943 OPTNQ96CV9 577 aa17.52■□□□□ 0.4
CCNE1-202ENST00000357943 LRRC2Q9BYS8 371 aa17.52■□□□□ 0.4
CCNE1-202ENST00000357943 UPF3BQ9BZI7 483 aaKnown RBP17.52■□□□□ 0.4
CCNE1-202ENST00000357943 KANSL2Q9H9L4 492 aa17.52■□□□□ 0.4
CCNE1-202ENST00000357943 TCP11L1Q9NUJ3 509 aa17.52■□□□□ 0.4
CCNE1-202ENST00000357943 MTMR4Q9NYA4 1195 aa17.52■□□□□ 0.4
CCNE1-202ENST00000357943 DOCK1Q14185 1865 aa17.52■□□□□ 0.39
CCNE1-202ENST00000357943 PRC1O43663 620 aa17.51■□□□□ 0.39
CCNE1-202ENST00000357943 HMGB1P09429 215 aaKnown RBP17.51■□□□□ 0.39
CCNE1-202ENST00000357943 EXOSC10Q01780 885 aaKnown RBP17.51■□□□□ 0.39
CCNE1-202ENST00000357943 DHX32Q7L7V1 743 aaKnown RBP17.51■□□□□ 0.39
CCNE1-202ENST00000357943 ERO1BQ86YB8 467 aa17.51■□□□□ 0.39
CCNE1-202ENST00000357943 OTUD5Q96G74 571 aa17.51■□□□□ 0.39
CCNE1-202ENST00000357943 ZSCAN10Q96SZ4 725 aaPredicted RBP17.51■□□□□ 0.39
CCNE1-202ENST00000357943 TM6SF1Q9BZW5 370 aa17.51■□□□□ 0.39
CCNE1-202ENST00000357943 ZSWIM6Q9HCJ5 1215 aa17.51■□□□□ 0.39
CCNE1-202ENST00000357943 STX8Q9UNK0 236 aa17.51■□□□□ 0.39
CCNE1-202ENST00000357943 TNKSO95271 1327 aa17.51■□□□□ 0.39
CCNE1-202ENST00000357943 ATAD5Q96QE3 1844 aa17.51■□□□□ 0.39
CCNE1-202ENST00000357943 GREB1LQ9C091 1923 aaPredicted RBP17.51■□□□□ 0.39
CCNE1-202ENST00000357943 A0A1W2PRG0 241 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 EEF2P13639 858 aaKnown RBP17.5■□□□□ 0.39
CCNE1-202ENST00000357943 GJA5P36382 358 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 ECE1P42892 770 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 ZNF157P51786 506 aaPredicted RBP17.5■□□□□ 0.39
CCNE1-202ENST00000357943 C1QTNF8P60827 252 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 HTRA3P83110 453 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 ATP2B2Q01814 1243 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 RGMBQ6NW40 437 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 RUFY3Q7L099 469 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 ACER1Q8TDN7 264 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 UBAC1Q9BSL1 405 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 IFIT3O14879 490 aaKnown RBP17.5■□□□□ 0.39
CCNE1-202ENST00000357943 IRF6O14896 467 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 TTLL1O95922 423 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 RPS6KB1P23443 525 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 NOVP48745 357 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 PPATQ06203 517 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 RCSD1Q6JBY9 416 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 ENAHQ8N8S7 591 aaPredicted RBP17.5■□□□□ 0.39
CCNE1-202ENST00000357943 IGDCC4Q8TDY8 1250 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 GPHNQ9NQX3 736 aaPredicted RBP17.5■□□□□ 0.39
CCNE1-202ENST00000357943 CLIP2Q9UDT6 1046 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 AFG3L2Q9Y4W6 797 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 CYP46A1Q9Y6A2 500 aa17.5■□□□□ 0.39
CCNE1-202ENST00000357943 TRIM75PA6NK02 468 aa17.49■□□□□ 0.39
CCNE1-202ENST00000357943 MKRN3Q13064 507 aaKnown RBP17.49■□□□□ 0.39
CCNE1-202ENST00000357943 SPP2Q13103 211 aa17.49■□□□□ 0.39
CCNE1-202ENST00000357943 SEC23AQ15436 765 aa17.49■□□□□ 0.39
CCNE1-202ENST00000357943 RASAL3Q86YV0 1011 aa17.49■□□□□ 0.39
CCNE1-202ENST00000357943 ZNF280CQ8ND82 737 aa17.49■□□□□ 0.39
CCNE1-202ENST00000357943 WNK4Q96J92 1243 aa17.49■□□□□ 0.39
CCNE1-202ENST00000357943 AS3MTQ9HBK9 375 aa17.49■□□□□ 0.39
CCNE1-202ENST00000357943 SENP2Q9HC62 589 aa17.49■□□□□ 0.39
CCNE1-202ENST00000357943 NYAP2Q9P242 653 aa17.49■□□□□ 0.39
CCNE1-202ENST00000357943 PPIL2Q13356 520 aa17.48■□□□□ 0.39
CCNE1-202ENST00000357943 DGKHQ86XP1 1220 aa17.48■□□□□ 0.39
CCNE1-202ENST00000357943 HHIPL1Q96JK4 782 aa17.48■□□□□ 0.39
CCNE1-202ENST00000357943 WDR18Q9BV38 432 aa17.48■□□□□ 0.39
CCNE1-202ENST00000357943 ERICH2A1L162 156 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 RASSF10A6NK89 507 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 SH2B2O14492 632 aaPredicted RBP17.47■□□□□ 0.39
CCNE1-202ENST00000357943 DGKZQ13574 1117 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 MTMR2Q13614 643 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 SART3Q15020 963 aaKnown RBP17.47■□□□□ 0.39
CCNE1-202ENST00000357943 ZYXQ15942 572 aaKnown RBP17.47■□□□□ 0.39
CCNE1-202ENST00000357943 TMEM67Q5HYA8 995 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 SPRYD7Q5W111 196 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 LRRC47Q8N1G4 583 aaKnown RBP17.47■□□□□ 0.39
CCNE1-202ENST00000357943 MKL1Q969V6 931 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 TMEM87BQ96K49 555 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 TTC14Q96N46 770 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 TMEM47Q9BQJ4 181 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 ARHGEF10LQ9HCE6 1279 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 WDR19Q8NEZ3 1342 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 FAM155AB1AL88 458 aaPredicted RBP17.47■□□□□ 0.39
CCNE1-202ENST00000357943 USP17L10C9JJH3 530 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 BACE1P56817 501 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 WTAPQ15007 396 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 DEFB115Q30KQ5 88 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 CCDC178Q5BJE1 867 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 IFIT1BQ5T764 474 aaKnown RBP17.47■□□□□ 0.39
CCNE1-202ENST00000357943 CYP4F22Q6NT55 531 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 Q6ZUG5 572 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 PAXIP1Q6ZW49 1069 aaPredicted RBP17.47■□□□□ 0.39
CCNE1-202ENST00000357943 MTA3Q9BTC8 594 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 TBC1D2Q9BYX2 928 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 LY9Q9HBG7 655 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 TMX2Q9Y320 296 aa17.47■□□□□ 0.39
CCNE1-202ENST00000357943 PHIPQ8WWQ0 1821 aa17.46■□□□□ 0.39
CCNE1-202ENST00000357943 SLC10A3P09131 477 aa17.46■□□□□ 0.39
CCNE1-202ENST00000357943 ZBTB48P10074 688 aaPredicted RBP17.46■□□□□ 0.39
CCNE1-202ENST00000357943 NEK4P51957 841 aa17.46■□□□□ 0.39
CCNE1-202ENST00000357943 GRM1Q13255 1194 aa17.46■□□□□ 0.39
CCNE1-202ENST00000357943 PPP4R3BQ5MIZ7 849 aa17.46■□□□□ 0.39
CCNE1-202ENST00000357943 ANKS1AQ92625 1134 aa17.46■□□□□ 0.39
CCNE1-202ENST00000357943 FEZ1Q99689 392 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms