RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 GDAP1L1Q96MZ0 367 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 IQSEC3Q9UPP2 1182 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 CPDO75976 1380 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 ABCC6O95255 1503 aa9.32□□□□□ -0.92
CDC42SE1-201ENST00000357235 CDC25AP30304 524 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 NTRK3Q16288 839 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 KIF6Q6ZMV9 814 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 MFSD6Q6ZSS7 791 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 FAM217BQ9NTX9 383 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 KIF3CO14782 793 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 PRDM1O75626 825 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 ERLIN2O94905 339 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 ABL1P00519 1130 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 MMP1P03956 469 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 FILIP1LQ4L180 1135 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 RSRC2Q7L4I2 434 aaKnown RBP9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 SLC35F6Q8N357 371 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 ENOX1Q8TC92 643 aaKnown RBP9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 TMEM87BQ96K49 555 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 MED15Q96RN5 788 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 NUP88Q99567 741 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 HINFPQ9BQA5 517 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 FAM107BQ9H098 131 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 VPS16Q9H269 839 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 BLZF1Q9H2G9 400 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 STRN4Q9NRL3 753 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 VPS54Q9P1Q0 977 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 SH3BP1Q9Y3L3 701 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 CTAGE9A4FU28 777 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 N4BP3O15049 544 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 SSR1P43307 286 aaKnown RBP9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 EIF5P55010 431 aaKnown RBP9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 MDM2Q00987 491 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 SETQ01105 290 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 TBX2Q13207 712 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 TCIRG1Q13488 830 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 WTAPQ15007 396 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 HSP90B2PQ58FF3 399 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 RILPL1Q5EBL4 403 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 SRGAP1Q7Z6B7 1085 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 EEF2KMTQ96G04 330 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 PNKPQ96T60 521 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 PLCD4Q9BRC7 762 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 FBXO2Q9UK22 296 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 ADGRG1Q9Y653 693 aa9.31□□□□□ -0.92
CDC42SE1-201ENST00000357235 SYNRGQ9UMZ2 1314 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 CCDC151A5D8V7 595 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 H0YHG0 523 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 ZNF18P17022 549 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 ATF3P18847 181 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 SCP2P22307 547 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 PTPREP23469 700 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 SARNPP82979 210 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 GBP6Q6ZN66 633 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 IFNL3Q8IZI9 196 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 ZCRB1Q8TBF4 217 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 WASF1Q92558 559 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 PLEKHA4Q9H4M7 779 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 ABCB6Q9NP58 842 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 C5P01031 1676 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 ANKRD18BA2A2Z9 1011 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 TULP1O00294 542 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 PLCD1P51178 756 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 MORC3Q14149 939 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 NR1I3Q14994 352 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 ZNF174Q15697 407 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 MAP9Q49MG5 647 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 SLF1Q9BQI6 1058 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 TACO1Q9BSH4 297 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 UBAC1Q9BSL1 405 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 TRMT112Q9UI30 125 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 GUCA1BQ9UMX6 200 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 CTNND2Q9UQB3 1225 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 FAN1Q9Y2M0 1017 aa9.3□□□□□ -0.92
CDC42SE1-201ENST00000357235 ENC1O14682 589 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 ERLIN1O75477 346 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 FMNL1O95466 1100 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 CD44P16070 742 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 HNRNPH1P31943 449 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 FXR1P51114 621 aaKnown RBP eCLIP9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 TTF1Q15361 905 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 NCAPH2Q6IBW4 605 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 STRBPQ96SI9 672 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 CDC23Q9UJX2 597 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 SLC4A4Q9Y6R1 1079 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 AFDNP55196 1824 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 CTAGE15A4D2H0 777 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 PPFIA4O75335 1185 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 CTAGE8P0CG41 777 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 HDXQ7Z353 690 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 CTAGE6Q86UF2 777 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 CTAGE4Q8IX94 777 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 DNAJC10Q8IXB1 793 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 CEP112Q8N8E3 955 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 RASSF8Q8NHQ8 419 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 TBC1D22AQ8WUA7 517 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 CALR3Q96L12 384 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms