RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 FAM207AQ9NSI2 230 aaPredicted RBP17.18■□□□□ 0.34
STRN3-201ENST00000355683 DEXIO95424 95 aa17.17■□□□□ 0.34
STRN3-201ENST00000355683 USP17L8P0C7I0 530 aa17.17■□□□□ 0.34
STRN3-201ENST00000355683 CACNB1Q02641 598 aaPredicted RBP17.17■□□□□ 0.34
STRN3-201ENST00000355683 ZYXQ15942 572 aaKnown RBP17.17■□□□□ 0.34
STRN3-201ENST00000355683 CCDC40Q4G0X9 1142 aa17.17■□□□□ 0.34
STRN3-201ENST00000355683 ACRBPQ8NEB7 543 aa17.17■□□□□ 0.34
STRN3-201ENST00000355683 FRMPD2Q68DX3 1309 aaPredicted RBP17.17■□□□□ 0.34
STRN3-201ENST00000355683 PCCAP05165 728 aaPredicted RBP17.17■□□□□ 0.34
STRN3-201ENST00000355683 CMA1P23946 247 aa17.17■□□□□ 0.34
STRN3-201ENST00000355683 NELFCDQ8IXH7 590 aa17.17■□□□□ 0.34
STRN3-201ENST00000355683 PP2D1A8MPX8 630 aa17.17■□□□□ 0.34
STRN3-201ENST00000355683 CRKLP46109 303 aaKnown RBP17.17■□□□□ 0.34
STRN3-201ENST00000355683 LLGL1Q15334 1064 aa17.17■□□□□ 0.34
STRN3-201ENST00000355683 KCTD19Q17RG1 926 aaPredicted RBP17.17■□□□□ 0.34
STRN3-201ENST00000355683 TBC1D10BQ4KMP7 808 aaPredicted RBP17.17■□□□□ 0.34
STRN3-201ENST00000355683 RILPL1Q5EBL4 403 aa17.17■□□□□ 0.34
STRN3-201ENST00000355683 SEPT12Q8IYM1 358 aa17.17■□□□□ 0.34
STRN3-201ENST00000355683 TMEM87BQ96K49 555 aa17.17■□□□□ 0.34
STRN3-201ENST00000355683 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.17■□□□□ 0.34
STRN3-201ENST00000355683 CCNT1O60563 726 aaKnown RBP17.16■□□□□ 0.34
STRN3-201ENST00000355683 CASP14P31944 242 aa17.16■□□□□ 0.34
STRN3-201ENST00000355683 RFX5P48382 616 aaPredicted RBP17.16■□□□□ 0.34
STRN3-201ENST00000355683 MAEAQ7L5Y9 396 aa17.16■□□□□ 0.34
STRN3-201ENST00000355683 NLRC4Q9NPP4 1024 aa17.16■□□□□ 0.34
STRN3-201ENST00000355683 BIN2Q9UBW5 565 aaPredicted RBP17.16■□□□□ 0.34
STRN3-201ENST00000355683 TMCO5BA8MYB1 307 aa17.16■□□□□ 0.34
STRN3-201ENST00000355683 PRDX5P30044 214 aa17.16■□□□□ 0.34
STRN3-201ENST00000355683 TMEM87AQ8NBN3 555 aa17.16■□□□□ 0.34
STRN3-201ENST00000355683 ERO1AQ96HE7 468 aa17.16■□□□□ 0.34
STRN3-201ENST00000355683 TFR2Q9UP52 801 aa17.16■□□□□ 0.34
STRN3-201ENST00000355683 DCCP43146 1447 aa17.16■□□□□ 0.34
STRN3-201ENST00000355683 HEG1Q9ULI3 1381 aa17.16■□□□□ 0.34
STRN3-201ENST00000355683 MAP3K15Q6ZN16 1313 aa17.16■□□□□ 0.34
STRN3-201ENST00000355683 TEX33O43247 280 aa17.16■□□□□ 0.34
STRN3-201ENST00000355683 KIF20AO95235 890 aa17.16■□□□□ 0.34
STRN3-201ENST00000355683 HIBADHP31937 336 aaKnown RBP17.16■□□□□ 0.34
STRN3-201ENST00000355683 HLTFQ14527 1009 aaKnown RBP eCLIP17.16■□□□□ 0.34
STRN3-201ENST00000355683 CCDC122Q5T0U0 273 aa17.16■□□□□ 0.34
STRN3-201ENST00000355683 RNF187Q5TA31 235 aaPredicted RBP17.16■□□□□ 0.34
STRN3-201ENST00000355683 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.16■□□□□ 0.34
STRN3-201ENST00000355683 SYNRGQ9UMZ2 1314 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 ERFEQ4G0M1 354 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 USPL1Q5W0Q7 1092 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 DTHD1Q6ZMT9 781 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 CERS3Q8IU89 383 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 FMR1NBQ8N0W7 255 aaPredicted RBP17.15■□□□□ 0.34
STRN3-201ENST00000355683 CCDC148Q8NFR7 591 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 CCNL1Q9UK58 526 aaPredicted RBP17.15■□□□□ 0.34
STRN3-201ENST00000355683 PPP2R2CQ9Y2T4 447 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 NRKQ7Z2Y5 1582 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 USP17L3A6NCW0 530 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 USP17L4A6NCW7 530 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 ETF1P62495 437 aaKnown RBP17.15■□□□□ 0.34
STRN3-201ENST00000355683 UTP14CQ5TAP6 766 aaKnown RBP17.15■□□□□ 0.34
STRN3-201ENST00000355683 USP17L1Q7RTZ2 530 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 IQUBQ8NA54 791 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 FEZ1Q99689 392 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 ATG3Q9NT62 314 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 EXOC1Q9NV70 894 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 CCDC87Q9NVE4 849 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 CUTAO60888 179 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 ANTXR2P58335 489 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 TTC19Q6DKK2 380 aaPredicted RBP17.15■□□□□ 0.34
STRN3-201ENST00000355683 KANSL2Q9H9L4 492 aa17.15■□□□□ 0.34
STRN3-201ENST00000355683 TFRCP02786 760 aaKnown RBP17.14■□□□□ 0.34
STRN3-201ENST00000355683 TBC1D8BQ0IIM8 1120 aa17.14■□□□□ 0.34
STRN3-201ENST00000355683 SHC4Q6S5L8 630 aa17.14■□□□□ 0.34
STRN3-201ENST00000355683 DHX40Q8IX18 779 aaKnown RBP17.14■□□□□ 0.34
STRN3-201ENST00000355683 STRBPQ96SI9 672 aaKnown RBP17.14■□□□□ 0.34
STRN3-201ENST00000355683 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.14■□□□□ 0.344e-9■■□□□ 12.8
STRN3-201ENST00000355683 LDHBP07195 334 aaKnown RBP17.14■□□□□ 0.33
STRN3-201ENST00000355683 RXRBP28702 533 aa17.14■□□□□ 0.33
STRN3-201ENST00000355683 KIF5BP33176 963 aa17.14■□□□□ 0.33
STRN3-201ENST00000355683 SCNN1DP51172 638 aa17.14■□□□□ 0.33
STRN3-201ENST00000355683 CTR9Q6PD62 1173 aa17.14■□□□□ 0.33
STRN3-201ENST00000355683 MRFAP1L1Q96HT8 127 aa17.14■□□□□ 0.33
STRN3-201ENST00000355683 ZMYM6O95789 1325 aa17.14■□□□□ 0.33
STRN3-201ENST00000355683 PDE4DQ08499 809 aa17.14■□□□□ 0.33
STRN3-201ENST00000355683 SPECC1LQ69YQ0 1117 aa17.14■□□□□ 0.33
STRN3-201ENST00000355683 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.14■□□□□ 0.33
STRN3-201ENST00000355683 IFT81Q8WYA0 676 aa17.14■□□□□ 0.33
STRN3-201ENST00000355683 CCDC113Q9H0I3 377 aa17.14■□□□□ 0.33
STRN3-201ENST00000355683 LOC102724428A0A0B4J2F2 783 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 TRIM37O94972 964 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 TECP42680 631 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 SIK1P57059 783 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 ARMCX5Q6P1M9 558 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 LRRC47Q8N1G4 583 aaKnown RBP17.13■□□□□ 0.33
STRN3-201ENST00000355683 ZBTB21Q9ULJ3 1066 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 CTAGE15A4D2H0 777 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 ERVV-2B6SEH9 535 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 CTAGE8P0CG41 777 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 CYP27A1Q02318 531 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 TOGARAM2Q6ZUX3 1019 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 CTAGE6Q86UF2 777 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 CTAGE4Q8IX94 777 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 LRRN4CLQ8ND94 238 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 GDAQ9Y2T3 454 aa17.13■□□□□ 0.33
STRN3-201ENST00000355683 CTDP1Q9Y5B0 961 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms