RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 RNF207Q6ZRF8 634 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 HOMER3Q9NSC5 361 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 STMN3Q9NZ72 180 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 BAG3O95817 575 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 FAM133BQ5BKY9 247 aaKnown RBP8.84□□□□□ -0.99
SCN8A-201ENST00000354534 DTHD1Q6ZMT9 781 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 DNM1Q05193 864 aaKnown RBP8.84□□□□□ -0.99
SCN8A-201ENST00000354534 ITKQ08881 620 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 DNAJC6O75061 913 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 TSPY1Q01534 308 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 RTN1Q16799 776 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 ZBTB43O43298 467 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 RHOBTB1O94844 696 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 UBE3AQ05086 875 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 GLE1Q53GS7 698 aaKnown RBP8.84□□□□□ -0.99
SCN8A-201ENST00000354534 SH3GL2Q99962 352 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 MYO1AQ9UBC5 1043 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 ELP1O95163 1332 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 ASPHQ12797 758 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 IFT88Q13099 833 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 PROSER2Q86WR7 435 aaPredicted RBP8.84□□□□□ -0.99
SCN8A-201ENST00000354534 FBXL13Q8NEE6 735 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 SH2D4AQ9H788 454 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 ORC4O43929 436 aa8.84□□□□□ -0.99
SCN8A-201ENST00000354534 C9orf84Q5VXU9 1444 aa8.84□□□□□ -1
SCN8A-201ENST00000354534 KIAA1107Q9UPP5 1409 aa8.84□□□□□ -1
SCN8A-201ENST00000354534 FAM95CA0A1B0GW59 222 aa8.84□□□□□ -1
SCN8A-201ENST00000354534 EFCAB14O75071 495 aa8.84□□□□□ -1
SCN8A-201ENST00000354534 GPTP24298 496 aa8.84□□□□□ -1
SCN8A-201ENST00000354534 RPL13P26373 211 aaKnown RBP8.84□□□□□ -1
SCN8A-201ENST00000354534 LONRF3Q496Y0 759 aa8.84□□□□□ -1
SCN8A-201ENST00000354534 GOLGA8KD6RF30 607 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 JPH4Q96JJ6 628 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 KIFC3Q9BVG8 833 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 NBPF26B4DH59 902 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 E2F4Q16254 413 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 NBPF14Q5TI25 921 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 MYSM1Q5VVJ2 828 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 TLK2Q86UE8 772 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 NBPF15Q8N660 670 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 PPHLN1Q8NEY8 458 aaKnown RBP8.83□□□□□ -1
SCN8A-201ENST00000354534 A0A1B0GW55 424 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 DUX4L2P0CJ85 424 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 DUX4L3P0CJ86 424 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 DUX4L4P0CJ87 422 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 DUX4L5P0CJ88 424 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 DUX4L6P0CJ89 424 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 DUX4L7P0CJ90 424 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 DUX4Q9UBX2 424 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 TSC22D4Q9Y3Q8 395 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 LRPPRCP42704 1394 aaKnown RBP8.83□□□□□ -1
SCN8A-201ENST00000354534 KRT4P19013 534 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 TRAF7Q6Q0C0 670 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 TTLL11Q8NHH1 800 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 PRR23D1E9PI22 279 aaPredicted RBP8.83□□□□□ -1
SCN8A-201ENST00000354534 THAP12O43422 761 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 PRR23D2P0DMB1 279 aaPredicted RBP8.83□□□□□ -1
SCN8A-201ENST00000354534 CCT5P48643 541 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 ART3Q13508 389 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 SECISBP2LQ93073 1101 aaKnown RBP8.83□□□□□ -1
SCN8A-201ENST00000354534 COG4Q9H9E3 785 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 GEMIN8Q9NWZ8 242 aaKnown RBP8.83□□□□□ -1
SCN8A-201ENST00000354534 WARS2Q9UGM6 360 aaKnown RBP8.83□□□□□ -1
SCN8A-201ENST00000354534 AMOTL2Q9Y2J4 779 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 KLF18A0A0U1RQI7 1052 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 STX1BP61266 288 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 SLC13A4Q9UKG4 626 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 TRAF5O00463 557 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 DKC1O60832 514 aaKnown RBP eCLIP8.83□□□□□ -1
SCN8A-201ENST00000354534 FMNL1O95466 1100 aaPredicted RBP8.83□□□□□ -1
SCN8A-201ENST00000354534 TRAF1Q13077 416 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 BMP2KLQ5H9B9 411 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 IGSF22Q8N9C0 903 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 SPDYE1Q8NFV5 336 aaPredicted RBP8.83□□□□□ -1
SCN8A-201ENST00000354534 KLHL29Q96CT2 875 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 DYDC2Q96IM9 177 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 ATP11BQ9Y2G3 1177 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 FIS1Q9Y3D6 152 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 GAPVD1Q14C86 1478 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 OATP04181 439 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 TJAP1Q5JTD0 557 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 CEP78Q5JTW2 689 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 ZFYVE19Q96K21 471 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 LRRC2Q9BYS8 371 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 TTF2Q9UNY4 1162 aaKnown RBP8.83□□□□□ -1
SCN8A-201ENST00000354534 EVI5O60447 810 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 SUN1O94901 812 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 MPRIPQ6WCQ1 1025 aa8.83□□□□□ -1
SCN8A-201ENST00000354534 TBC1D8BQ0IIM8 1120 aa8.82□□□□□ -1
SCN8A-201ENST00000354534 NMIQ13287 307 aaPredicted RBP8.82□□□□□ -1
SCN8A-201ENST00000354534 KRT79Q5XKE5 535 aa8.82□□□□□ -1
SCN8A-201ENST00000354534 PGBD1Q96JS3 809 aa8.82□□□□□ -1
SCN8A-201ENST00000354534 CYTH2Q99418 400 aa8.82□□□□□ -1
SCN8A-201ENST00000354534 KCNA1Q09470 495 aa8.82□□□□□ -1
SCN8A-201ENST00000354534 IQCB1Q15051 598 aa8.82□□□□□ -1
SCN8A-201ENST00000354534 BIN2Q9UBW5 565 aaPredicted RBP8.82□□□□□ -1
SCN8A-201ENST00000354534 CADPSQ9ULU8 1353 aa8.82□□□□□ -1
SCN8A-201ENST00000354534 KRT81Q14533 505 aa8.82□□□□□ -1
SCN8A-201ENST00000354534 NFE2L2Q16236 605 aa8.82□□□□□ -1
SCN8A-201ENST00000354534 PEX26Q7Z412 305 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms