RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 USP17L11C9JVI0 530 aa19.54■□□□□ 0.72
DDX55-202ENST00000354291 USP17L18D6R9N7 530 aa19.54■□□□□ 0.72
DDX55-202ENST00000354291 USP17L22D6RA61 530 aa19.54■□□□□ 0.72
DDX55-202ENST00000354291 USP17L17D6RBQ6 530 aa19.54■□□□□ 0.72
DDX55-202ENST00000354291 USP17L19D6RCP7 530 aa19.54■□□□□ 0.72
DDX55-202ENST00000354291 USP17L20D6RJB6 530 aa19.54■□□□□ 0.72
DDX55-202ENST00000354291 USP17L24Q0WX57 530 aa19.54■□□□□ 0.72
DDX55-202ENST00000354291 MAPKAPK5Q8IW41 473 aa19.54■□□□□ 0.72
DDX55-202ENST00000354291 TGFBRAP1Q8WUH2 860 aa19.54■□□□□ 0.72
DDX55-202ENST00000354291 MAST2Q6P0Q8 1798 aa19.53■□□□□ 0.72
DDX55-202ENST00000354291 HOXC6P09630 235 aa19.53■□□□□ 0.72
DDX55-202ENST00000354291 PLA2G5P39877 138 aa19.53■□□□□ 0.72
DDX55-202ENST00000354291 GORABQ5T7V8 394 aa19.53■□□□□ 0.72
DDX55-202ENST00000354291 DPP9Q86TI2 863 aa19.53■□□□□ 0.72
DDX55-202ENST00000354291 SPATA5Q8NB90 893 aa19.53■□□□□ 0.72
DDX55-202ENST00000354291 DNAJC18Q9H819 358 aa19.53■□□□□ 0.72
DDX55-202ENST00000354291 GINM1Q9NU53 330 aa19.53■□□□□ 0.72
DDX55-202ENST00000354291 LRP2BPQ9P2M1 347 aa19.53■□□□□ 0.72
DDX55-202ENST00000354291 PALD1Q9ULE6 856 aa19.53■□□□□ 0.72
DDX55-202ENST00000354291 AKAP2Q9Y2D5 859 aa19.53■□□□□ 0.72
DDX55-202ENST00000354291 CYBAP13498 195 aa19.52■□□□□ 0.72
DDX55-202ENST00000354291 EPHB4P54760 987 aa19.52■□□□□ 0.72
DDX55-202ENST00000354291 TLE2Q04725 743 aa19.52■□□□□ 0.72
DDX55-202ENST00000354291 TFCP2Q12800 502 aa19.52■□□□□ 0.72
DDX55-202ENST00000354291 GRB14Q14449 540 aa19.52■□□□□ 0.72
DDX55-202ENST00000354291 SSH1Q8WYL5 1049 aa19.52■□□□□ 0.72
DDX55-202ENST00000354291 FEZ1Q99689 392 aa19.52■□□□□ 0.72
DDX55-202ENST00000354291 COPRSQ9NQ92 184 aa19.52■□□□□ 0.72
DDX55-202ENST00000354291 AATFQ9NY61 560 aaKnown RBP eCLIP19.52■□□□□ 0.72
DDX55-202ENST00000354291 LTBP2Q14767 1821 aa19.51■□□□□ 0.71
DDX55-202ENST00000354291 E9PSI1 815 aa19.51■□□□□ 0.71
DDX55-202ENST00000354291 BAG3O95817 575 aa19.51■□□□□ 0.71
DDX55-202ENST00000354291 ITGB8P26012 769 aa19.51■□□□□ 0.71
DDX55-202ENST00000354291 CATSPERGQ6ZRH7 1159 aa19.51■□□□□ 0.71
DDX55-202ENST00000354291 BTBD7Q9P203 1132 aa19.51■□□□□ 0.71
DDX55-202ENST00000354291 SAP30BPQ9UHR5 308 aaKnown RBP19.51■□□□□ 0.71
DDX55-202ENST00000354291 TACC3Q9Y6A5 838 aa19.51■□□□□ 0.71
DDX55-202ENST00000354291 NCOR1O75376 2440 aa19.5■□□□□ 0.71
DDX55-202ENST00000354291 GH2P01242 217 aa19.5■□□□□ 0.71
DDX55-202ENST00000354291 DNAJB2P25686 324 aa19.5■□□□□ 0.71
DDX55-202ENST00000354291 SNX17Q15036 470 aa19.5■□□□□ 0.71
DDX55-202ENST00000354291 PRAMEF19Q5SWL8 479 aa19.5■□□□□ 0.71
DDX55-202ENST00000354291 ZNF576Q9H609 170 aa19.5■□□□□ 0.71
DDX55-202ENST00000354291 FRMPD3Q5JV73 1810 aa19.49■□□□□ 0.71
DDX55-202ENST00000354291 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.49■□□□□ 0.71
DDX55-202ENST00000354291 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.49■□□□□ 0.71
DDX55-202ENST00000354291 SEPT4O43236 478 aa19.49■□□□□ 0.71
DDX55-202ENST00000354291 RAG1P15918 1043 aa19.49■□□□□ 0.71
DDX55-202ENST00000354291 LRRC41Q15345 812 aa19.49■□□□□ 0.71
DDX55-202ENST00000354291 METTL16Q86W50 562 aaKnown RBP19.49■□□□□ 0.71
DDX55-202ENST00000354291 ATXN2LQ8WWM7 1075 aaKnown RBP19.49■□□□□ 0.71
DDX55-202ENST00000354291 BDP1A6H8Y1 2624 aa19.48■□□□□ 0.71
DDX55-202ENST00000354291 PLCG2P16885 1265 aa19.48■□□□□ 0.71
DDX55-202ENST00000354291 MAP3K12Q12852 859 aa19.48■□□□□ 0.71
DDX55-202ENST00000354291 NAA16Q6N069 864 aaPredicted RBP19.48■□□□□ 0.71
DDX55-202ENST00000354291 ADAMTS19Q8TE59 1207 aa19.48■□□□□ 0.71
DDX55-202ENST00000354291 TIFAQ96CG3 184 aa19.48■□□□□ 0.71
DDX55-202ENST00000354291 ASB2Q96Q27 587 aa19.48■□□□□ 0.71
DDX55-202ENST00000354291 FLT1P17948 1338 aa19.48■□□□□ 0.71
DDX55-202ENST00000354291 HLA-DOAP06340 250 aa19.47■□□□□ 0.71
DDX55-202ENST00000354291 CLTBP09497 229 aa19.47■□□□□ 0.71
DDX55-202ENST00000354291 ADORA2AP29274 412 aa19.47■□□□□ 0.71
DDX55-202ENST00000354291 RAB3GAP1Q15042 981 aa19.47■□□□□ 0.71
DDX55-202ENST00000354291 OLFML2BQ68BL8 750 aa19.47■□□□□ 0.71
DDX55-202ENST00000354291 C12orf42Q96LP6 360 aa19.47■□□□□ 0.71
DDX55-202ENST00000354291 GAS2L1Q99501 681 aaPredicted RBP19.47■□□□□ 0.71
DDX55-202ENST00000354291 HDAC5Q9UQL6 1122 aa19.47■□□□□ 0.71
DDX55-202ENST00000354291 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.47■□□□□ 0.71
DDX55-202ENST00000354291 MYO9BQ13459 2157 aa19.47■□□□□ 0.71
DDX55-202ENST00000354291 RLFQ13129 1914 aa19.47■□□□□ 0.71
DDX55-202ENST00000354291 PQBP1O60828 265 aaKnown RBP19.46■□□□□ 0.71
DDX55-202ENST00000354291 IGHA2P01877 340 aa19.46■□□□□ 0.71
DDX55-202ENST00000354291 VCAM1P19320 739 aa19.46■□□□□ 0.71
DDX55-202ENST00000354291 USP14P54578 494 aa19.46■□□□□ 0.71
DDX55-202ENST00000354291 FPGSQ05932 587 aa19.46■□□□□ 0.71
DDX55-202ENST00000354291 CCDC85BQ15834 202 aaPredicted RBP19.46■□□□□ 0.71
DDX55-202ENST00000354291 C1orf53Q5VUE5 145 aa19.46■□□□□ 0.71
DDX55-202ENST00000354291 ATF7IPQ6VMQ6 1270 aa19.46■□□□□ 0.71
DDX55-202ENST00000354291 UHRF1Q96T88 793 aaPredicted RBP19.46■□□□□ 0.71
DDX55-202ENST00000354291 TMEM39AQ9NV64 488 aa19.46■□□□□ 0.71
DDX55-202ENST00000354291 PPP4CP60510 307 aa19.45■□□□□ 0.7
DDX55-202ENST00000354291 SLFN5Q08AF3 891 aa19.45■□□□□ 0.7
DDX55-202ENST00000354291 FAM47AQ5JRC9 791 aa19.45■□□□□ 0.7
DDX55-202ENST00000354291 IL27Q8NEV9 243 aa19.45■□□□□ 0.7
DDX55-202ENST00000354291 ACER1Q8TDN7 264 aa19.45■□□□□ 0.7
DDX55-202ENST00000354291 RPAP3Q9H6T3 665 aaPredicted RBP19.45■□□□□ 0.7
DDX55-202ENST00000354291 SNRKQ9NRH2 765 aa19.45■□□□□ 0.7
DDX55-202ENST00000354291 THEGQ9P2T0 379 aa19.45■□□□□ 0.7
DDX55-202ENST00000354291 SPDYE16A6NNV3 312 aaPredicted RBP19.44■□□□□ 0.7
DDX55-202ENST00000354291 KIAA0355O15063 1070 aa19.44■□□□□ 0.7
DDX55-202ENST00000354291 STRNO43815 780 aa19.44■□□□□ 0.7
DDX55-202ENST00000354291 COBLO75128 1261 aa19.44■□□□□ 0.7
DDX55-202ENST00000354291 ARID4AP29374 1257 aaPredicted RBP19.44■□□□□ 0.7
DDX55-202ENST00000354291 MCAMP43121 646 aa19.44■□□□□ 0.7
DDX55-202ENST00000354291 MRPS5P82675 430 aaKnown RBP19.44■□□□□ 0.7
DDX55-202ENST00000354291 LBX2Q6XYB7 198 aa19.44■□□□□ 0.7
DDX55-202ENST00000354291 CCDC129Q6ZRS4 1044 aa19.44■□□□□ 0.7
DDX55-202ENST00000354291 MOV10L1Q9BXT6 1211 aaKnown RBP19.44■□□□□ 0.7
DDX55-202ENST00000354291 PRDM12Q9H4Q4 367 aa19.44■□□□□ 0.7
DDX55-202ENST00000354291 CCER2I3L3R5 266 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms