RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 NEFHP12036 1026 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 GNG11P61952 73 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 ITPK1Q13572 414 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 USP17L1Q7RTZ2 530 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 LAMC1P11047 1609 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 CYP2D6P10635 497 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 APOA5Q6Q788 366 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 LINC00116Q8NCU8 138 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 SERPINB13Q9UIV8 391 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 MED14O60244 1454 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 TESPA1A2RU30 521 aaPredicted RBP15.45■□□□□ 0.06
SMC6-201ENST00000351948 NOP56O00567 594 aaKnown RBP15.45■□□□□ 0.06
SMC6-201ENST00000351948 PLCD1P51178 756 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 UBXN2AP68543 259 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 PSTPIP2Q9H939 334 aa15.45■□□□□ 0.06
SMC6-201ENST00000351948 ZMYM6O95789 1325 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 BRD1O95696 1058 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 AOC3Q16853 763 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 RGS22Q8NE09 1264 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 SSH2Q76I76 1423 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 ATP10DQ9P241 1426 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 DLC1Q96QB1 1528 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 SPAG1Q07617 926 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 PPP2R5BQ15173 497 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 LZTS2Q9BRK4 669 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 ZSWIM5Q9P217 1185 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 SOS2Q07890 1332 aaPredicted RBP15.44■□□□□ 0.06
SMC6-201ENST00000351948 MKRN3Q13064 507 aaKnown RBP15.44■□□□□ 0.06
SMC6-201ENST00000351948 CC2D2BQ6DHV5 1058 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 CHURC1Q8WUH1 139 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 ZNF277Q9NRM2 450 aaPredicted RBP15.44■□□□□ 0.06
SMC6-201ENST00000351948 MTMR6Q9Y217 621 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 FAM170AA1A519 330 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 FOXO4P98177 505 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 PRR16Q569H4 304 aa15.44■□□□□ 0.06
SMC6-201ENST00000351948 SCG2P13521 617 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 SCARF1Q14162 830 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 ATL3Q6DD88 541 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 BLIDQ8IZY5 108 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 VPS16Q9H269 839 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 JADE2Q9NQC1 790 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 TECPR2O15040 1411 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 TMC4Q7Z404 712 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 NOSTRINQ8IVI9 506 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 CCDC65Q8IXS2 484 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 PGBD1Q96JS3 809 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 CTAGE1Q96RT6 745 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 SPDYE4A6NLX3 237 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 LARGE1O95461 756 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 SNW1Q13573 536 aaKnown RBP15.43■□□□□ 0.06
SMC6-201ENST00000351948 DCAF15Q66K64 600 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 CUTAO60888 179 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 HERC4Q5GLZ8 1057 aaPredicted RBP15.43■□□□□ 0.06
SMC6-201ENST00000351948 USP17L2Q6R6M4 530 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 TAX1BP1Q86VP1 789 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 SH3RF3Q8TEJ3 882 aaPredicted RBP15.43■□□□□ 0.06
SMC6-201ENST00000351948 CLIC6Q96NY7 704 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 PCDHA1Q9Y5I3 950 aa15.43■□□□□ 0.06
SMC6-201ENST00000351948 CARMIL3Q8ND23 1372 aa15.42■□□□□ 0.06
SMC6-201ENST00000351948 ARHGEF35A5YM69 484 aa15.42■□□□□ 0.06
SMC6-201ENST00000351948 TPH2Q8IWU9 490 aa15.42■□□□□ 0.06
SMC6-201ENST00000351948 NELFCDQ8IXH7 590 aa15.42■□□□□ 0.06
SMC6-201ENST00000351948 PIM2Q9P1W9 311 aa15.42■□□□□ 0.06
SMC6-201ENST00000351948 NEMFO60524 1076 aa15.42■□□□□ 0.06
SMC6-201ENST00000351948 CHGBP05060 677 aa15.42■□□□□ 0.06
SMC6-201ENST00000351948 TECP42680 631 aa15.42■□□□□ 0.06
SMC6-201ENST00000351948 RBSNQ9H1K0 784 aa15.42■□□□□ 0.06
SMC6-201ENST00000351948 CETN2P41208 172 aa15.42■□□□□ 0.06
SMC6-201ENST00000351948 HAUS3Q68CZ6 603 aa15.42■□□□□ 0.06
SMC6-201ENST00000351948 TRMT44Q8IYL2 757 aaKnown RBP15.42■□□□□ 0.06
SMC6-201ENST00000351948 CD209Q9NNX6 404 aa15.42■□□□□ 0.06
SMC6-201ENST00000351948 MTX1Q13505 466 aa15.42■□□□□ 0.06
SMC6-201ENST00000351948 IQCEQ6IPM2 695 aa15.42■□□□□ 0.06
SMC6-201ENST00000351948 FERMT2Q96AC1 680 aa15.42■□□□□ 0.06
SMC6-201ENST00000351948 MYL5Q02045 173 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 SYNCQ9H7C4 482 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 SPATA31A6Q5VVP1 1343 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 FRMPD1Q5SYB0 1578 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 RAPGEF1Q13905 1077 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 TBC1D10BQ4KMP7 808 aaPredicted RBP15.41■□□□□ 0.06
SMC6-201ENST00000351948 SLC27A3Q5K4L6 730 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 CIAPIN1Q6FI81 312 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 CABP7Q86V35 215 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 FBXO11Q86XK2 927 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 SLC44A5Q8NCS7 719 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 AIFM3Q96NN9 605 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 TAOK3Q9H2K8 898 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 TDRD3Q9H7E2 651 aaKnown RBP15.41■□□□□ 0.06
SMC6-201ENST00000351948 LMBRD1Q9NUN5 540 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 SPATA31A5Q5VU36 1347 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 SPATA31A7Q8IWB4 1347 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 CPDO75976 1380 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 ERLIN1O75477 346 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 STRBPQ96SI9 672 aaKnown RBP15.41■□□□□ 0.06
SMC6-201ENST00000351948 COA1Q9GZY4 146 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.41■□□□□ 0.064e-7■■□□□ 14.4
SMC6-201ENST00000351948 BICDL2A1A5D9 508 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 GPSM2P81274 684 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 PNOCQ13519 176 aa15.41■□□□□ 0.06
SMC6-201ENST00000351948 FTOQ9C0B1 505 aaKnown RBP eCLIP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms