RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ZYXQ15942 572 aaKnown RBP18.83■□□□□ 0.6
TSPAN4-201ENST00000346501 NBPF11Q86T75 865 aa18.83■□□□□ 0.6
TSPAN4-201ENST00000346501 KIAA1683Q9H0B3 1180 aa18.83■□□□□ 0.6
TSPAN4-201ENST00000346501 ASCC2Q9H1I8 757 aaPredicted RBP18.83■□□□□ 0.6
TSPAN4-201ENST00000346501 OSBPL3Q9H4L5 887 aa18.83■□□□□ 0.6
TSPAN4-201ENST00000346501 HELLSQ9NRZ9 838 aa18.83■□□□□ 0.6
TSPAN4-201ENST00000346501 DDX60LQ5H9U9 1706 aaKnown RBP18.83■□□□□ 0.6
TSPAN4-201ENST00000346501 PTPRFP10586 1907 aa18.82■□□□□ 0.6
TSPAN4-201ENST00000346501 CYP2D7A0A087X1C5 515 aa18.82■□□□□ 0.6
TSPAN4-201ENST00000346501 HOXA7P31268 230 aaPredicted RBP18.82■□□□□ 0.6
TSPAN4-201ENST00000346501 PLEKHM2Q8IWE5 1019 aa18.82■□□□□ 0.6
TSPAN4-201ENST00000346501 CCAR1Q8IX12 1150 aaKnown RBP18.82■□□□□ 0.6
TSPAN4-201ENST00000346501 IFNL3Q8IZI9 196 aa18.82■□□□□ 0.6
TSPAN4-201ENST00000346501 SLC44A5Q8NCS7 719 aa18.82■□□□□ 0.6
TSPAN4-201ENST00000346501 ADGRA2Q96PE1 1338 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 BAZ2AQ9UIF9 1905 aaKnown RBP18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 USP17L15C9J2P7 530 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 USP17L13C9JLJ4 530 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 USP17L11C9JVI0 530 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 USP17L18D6R9N7 530 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 USP17L22D6RA61 530 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 USP17L17D6RBQ6 530 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 USP17L19D6RCP7 530 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 USP17L20D6RJB6 530 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 HIP1O00291 1037 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 ECM2O94769 699 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 BCRP11274 1271 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 PDE4BQ07343 736 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 USP17L24Q0WX57 530 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 FAM110CQ1W6H9 321 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 SHROOM1Q2M3G4 852 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 ZNF444Q8N0Y2 327 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 ANKRD13CQ8N6S4 541 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 C12orf42Q96LP6 360 aa18.81■□□□□ 0.6
TSPAN4-201ENST00000346501 ICA1Q05084 483 aa18.8■□□□□ 0.6
TSPAN4-201ENST00000346501 SLC9C1Q4G0N8 1177 aa18.8■□□□□ 0.6
TSPAN4-201ENST00000346501 MCMDC2Q4G0Z9 681 aa18.8■□□□□ 0.6
TSPAN4-201ENST00000346501 RAET1EQ8TD07 263 aa18.8■□□□□ 0.6
TSPAN4-201ENST00000346501 COA7Q96BR5 231 aa18.8■□□□□ 0.6
TSPAN4-201ENST00000346501 SEC62Q99442 399 aaKnown RBP18.8■□□□□ 0.6
TSPAN4-201ENST00000346501 KANSL2Q9H9L4 492 aa18.8■□□□□ 0.6
TSPAN4-201ENST00000346501 EMILIN3Q9NT22 766 aa18.8■□□□□ 0.6
TSPAN4-201ENST00000346501 TNPO2O14787 897 aaKnown RBP18.79■□□□□ 0.6
TSPAN4-201ENST00000346501 AKR1B1P15121 316 aa18.79■□□□□ 0.6
TSPAN4-201ENST00000346501 ATP2B2Q01814 1243 aa18.79■□□□□ 0.6
TSPAN4-201ENST00000346501 STK11IPQ8N1F8 1099 aa18.79■□□□□ 0.6
TSPAN4-201ENST00000346501 DIAPH3Q9NSV4 1193 aa18.79■□□□□ 0.6
TSPAN4-201ENST00000346501 SRRDQ9UH36 339 aa18.79■□□□□ 0.6
TSPAN4-201ENST00000346501 MYH8P13535 1937 aa18.78■□□□□ 0.6
TSPAN4-201ENST00000346501 LOC285556D6RIA3 1793 aa18.78■□□□□ 0.6
TSPAN4-201ENST00000346501 HERVK_113P62684 666 aa18.78■□□□□ 0.6
TSPAN4-201ENST00000346501 EVX2Q03828 476 aa18.78■□□□□ 0.6
TSPAN4-201ENST00000346501 ACER1Q8TDN7 264 aa18.78■□□□□ 0.6
TSPAN4-201ENST00000346501 LPAR1Q92633 364 aa18.78■□□□□ 0.6
TSPAN4-201ENST00000346501 TRIM47Q96LD4 638 aa18.78■□□□□ 0.6
TSPAN4-201ENST00000346501 ARHGAP39Q9C0H5 1083 aa18.78■□□□□ 0.6
TSPAN4-201ENST00000346501 CWC22Q9HCG8 908 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-201ENST00000346501 MYPNQ86TC9 1320 aa18.77■□□□□ 0.6
TSPAN4-201ENST00000346501 GUCY1A2P33402 732 aa18.77■□□□□ 0.6
TSPAN4-201ENST00000346501 GPRC5AQ8NFJ5 357 aa18.77■□□□□ 0.6
TSPAN4-201ENST00000346501 P2RX7Q99572 595 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-201ENST00000346501 EPB41L4AQ9HCS5 686 aaPredicted RBP18.77■□□□□ 0.6
TSPAN4-201ENST00000346501 GOPCQ9HD26 462 aa18.77■□□□□ 0.6
TSPAN4-201ENST00000346501 PTCH2Q9Y6C5 1203 aa18.77■□□□□ 0.6
TSPAN4-201ENST00000346501 VCAM1P19320 739 aa18.76■□□□□ 0.59
TSPAN4-201ENST00000346501 SDSP20132 328 aa18.76■□□□□ 0.59
TSPAN4-201ENST00000346501 CCNA1P78396 465 aa18.76■□□□□ 0.59
TSPAN4-201ENST00000346501 PPARAQ07869 468 aa18.76■□□□□ 0.59
TSPAN4-201ENST00000346501 PPP4R3BQ5MIZ7 849 aa18.76■□□□□ 0.59
TSPAN4-201ENST00000346501 CCDC129Q6ZRS4 1044 aa18.76■□□□□ 0.59
TSPAN4-201ENST00000346501 TMEM106CQ9BVX2 250 aa18.76■□□□□ 0.59
TSPAN4-201ENST00000346501 TANGO6Q9C0B7 1094 aa18.76■□□□□ 0.59
TSPAN4-201ENST00000346501 RPAP3Q9H6T3 665 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-201ENST00000346501 BIN2Q9UBW5 565 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-201ENST00000346501 ROBO3Q96MS0 1386 aa18.76■□□□□ 0.59
TSPAN4-201ENST00000346501 RAD21O60216 631 aa18.75■□□□□ 0.59
TSPAN4-201ENST00000346501 NMIQ13287 307 aaPredicted RBP18.75■□□□□ 0.59
TSPAN4-201ENST00000346501 CATSPERGQ6ZRH7 1159 aa18.75■□□□□ 0.59
TSPAN4-201ENST00000346501 PAGR1Q9BTK6 254 aa18.75■□□□□ 0.59
TSPAN4-201ENST00000346501 HOXC10Q9NYD6 342 aa18.75■□□□□ 0.59
TSPAN4-201ENST00000346501 MORF4L1Q9UBU8 362 aa18.75■□□□□ 0.59
TSPAN4-201ENST00000346501 TMX2Q9Y320 296 aa18.75■□□□□ 0.59
TSPAN4-201ENST00000346501 NEFLP07196 543 aa18.74■□□□□ 0.59
TSPAN4-201ENST00000346501 TSPY3P0CV98 308 aa18.74■□□□□ 0.59
TSPAN4-201ENST00000346501 TSPY8P0CW00 308 aa18.74■□□□□ 0.59
TSPAN4-201ENST00000346501 RASA1P20936 1047 aa18.74■□□□□ 0.59
TSPAN4-201ENST00000346501 SOX10P56693 466 aa18.74■□□□□ 0.59
TSPAN4-201ENST00000346501 FAM227BQ96M60 508 aa18.74■□□□□ 0.59
TSPAN4-201ENST00000346501 VCPKMTQ9H867 229 aa18.74■□□□□ 0.59
TSPAN4-201ENST00000346501 CCDC171Q6TFL3 1326 aa18.74■□□□□ 0.59
TSPAN4-201ENST00000346501 A0A0D9SFI3 127 aa18.73■□□□□ 0.59
TSPAN4-201ENST00000346501 EEF2P13639 858 aaKnown RBP18.73■□□□□ 0.59
TSPAN4-201ENST00000346501 MAPK4P31152 587 aa18.73■□□□□ 0.59
TSPAN4-201ENST00000346501 UBXN2AP68543 259 aa18.73■□□□□ 0.59
TSPAN4-201ENST00000346501 COG2Q14746 738 aa18.73■□□□□ 0.59
TSPAN4-201ENST00000346501 ALX1Q15699 326 aa18.73■□□□□ 0.59
TSPAN4-201ENST00000346501 ARMC5Q96C12 935 aa18.73■□□□□ 0.59
TSPAN4-201ENST00000346501 RABGAP1Q9Y3P9 1069 aa18.73■□□□□ 0.59
TSPAN4-201ENST00000346501 A0A1W2PRG0 241 aa18.72■□□□□ 0.59
TSPAN4-201ENST00000346501 SMIM22K7EJ46 135 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms