RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 POLA2Q14181 598 aa17.29■□□□□ 0.36
SRPK1-201ENST00000346162 PARD6BQ9BYG5 372 aa17.29■□□□□ 0.36
SRPK1-201ENST00000346162 MMRN2Q9H8L6 949 aa17.29■□□□□ 0.36
SRPK1-201ENST00000346162 TTF2Q9UNY4 1162 aaKnown RBP17.29■□□□□ 0.36
SRPK1-201ENST00000346162 IFT74Q96LB3 600 aa17.29■□□□□ 0.36
SRPK1-201ENST00000346162 NR1I2O75469 434 aa17.29■□□□□ 0.36
SRPK1-201ENST00000346162 POTEJP0CG39 1038 aa17.29■□□□□ 0.36
SRPK1-201ENST00000346162 UBXN1Q04323 297 aa17.29■□□□□ 0.36
SRPK1-201ENST00000346162 TRAPPC3LQ5T215 181 aa17.29■□□□□ 0.36
SRPK1-201ENST00000346162 C6orf163Q5TEZ5 329 aa17.29■□□□□ 0.36
SRPK1-201ENST00000346162 TEX11Q8IYF3 940 aa17.29■□□□□ 0.36
SRPK1-201ENST00000346162 TDRD7Q8NHU6 1098 aaKnown RBP17.29■□□□□ 0.36
SRPK1-201ENST00000346162 PUS3Q9BZE2 481 aaKnown RBP17.29■□□□□ 0.36
SRPK1-201ENST00000346162 SAMM50Q9Y512 469 aa17.29■□□□□ 0.36
SRPK1-201ENST00000346162 PPP2R5BQ15173 497 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 PPP1R7Q15435 360 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 CNBD1Q8NA66 436 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 KCNJ14Q9UNX9 436 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 PDE6AP16499 860 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 ADALQ6DHV7 355 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 SYCP3Q8IZU3 236 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 LUC7L2Q9Y383 392 aaKnown RBP17.28■□□□□ 0.36
SRPK1-201ENST00000346162 CYP21A2P08686 494 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 CCDC38Q502W7 563 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 PIK3AP1Q6ZUJ8 805 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 ZNF589Q86UQ0 364 aaPredicted RBP17.28■□□□□ 0.36
SRPK1-201ENST00000346162 SPATA24Q86W54 205 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 PPANQ9NQ55 473 aaKnown RBP17.28■□□□□ 0.36
SRPK1-201ENST00000346162 AATFQ9NY61 560 aaKnown RBP eCLIP17.28■□□□□ 0.36
SRPK1-201ENST00000346162 TFCP2L1Q9NZI6 479 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 ADD1P35611 737 aaKnown RBP17.28■□□□□ 0.36
SRPK1-201ENST00000346162 ATP1A2P50993 1020 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 TRAF1Q13077 416 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 MTX1Q13505 466 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 PPFIBP2Q8ND30 876 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 VCXQ9H320 206 aa17.28■□□□□ 0.36
SRPK1-201ENST00000346162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.28■□□□□ 0.366e-7■■■■■ 111.8
SRPK1-201ENST00000346162 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.28■□□□□ 0.36
SRPK1-201ENST00000346162 CCNL1Q9UK58 526 aaPredicted RBP17.28■□□□□ 0.36
SRPK1-201ENST00000346162 RNF40O75150 1001 aa17.27■□□□□ 0.36
SRPK1-201ENST00000346162 VIMP08670 466 aaKnown RBP17.27■□□□□ 0.36
SRPK1-201ENST00000346162 CETN2P41208 172 aa17.27■□□□□ 0.36
SRPK1-201ENST00000346162 LETM2Q2VYF4 491 aa17.27■□□□□ 0.36
SRPK1-201ENST00000346162 PPP2R2CQ9Y2T4 447 aa17.27■□□□□ 0.36
SRPK1-201ENST00000346162 BICDL2A1A5D9 508 aa17.27■□□□□ 0.36
SRPK1-201ENST00000346162 RIMBP2O15034 1052 aa17.27■□□□□ 0.36
SRPK1-201ENST00000346162 CHUKO15111 745 aa17.27■□□□□ 0.36
SRPK1-201ENST00000346162 NLRP12P59046 1061 aa17.27■□□□□ 0.36
SRPK1-201ENST00000346162 MAP3K9P80192 1104 aa17.27■□□□□ 0.36
SRPK1-201ENST00000346162 PARP1P09874 1014 aaKnown RBP17.27■□□□□ 0.35
SRPK1-201ENST00000346162 IFI16Q16666 785 aaKnown RBP17.27■□□□□ 0.35
SRPK1-201ENST00000346162 IGSF22Q8N9C0 903 aa17.27■□□□□ 0.35
SRPK1-201ENST00000346162 MLKLQ8NB16 471 aa17.27■□□□□ 0.35
SRPK1-201ENST00000346162 PI4K2BQ8TCG2 481 aa17.27■□□□□ 0.35
SRPK1-201ENST00000346162 GPR108Q9NPR9 543 aa17.27■□□□□ 0.35
SRPK1-201ENST00000346162 PRPF4BQ13523 1007 aaKnown RBP17.27■□□□□ 0.35
SRPK1-201ENST00000346162 SAP30BPQ9UHR5 308 aaKnown RBP17.27■□□□□ 0.35
SRPK1-201ENST00000346162 TTC19Q6DKK2 380 aaPredicted RBP17.26■□□□□ 0.35
SRPK1-201ENST00000346162 CCDC42Q96M95 316 aa17.26■□□□□ 0.35
SRPK1-201ENST00000346162 LMTK3Q96Q04 1460 aa17.26■□□□□ 0.35
SRPK1-201ENST00000346162 SASH1O94885 1247 aa17.26■□□□□ 0.35
SRPK1-201ENST00000346162 MXRA7P84157 204 aa17.26■□□□□ 0.35
SRPK1-201ENST00000346162 SATB1Q01826 763 aa17.26■□□□□ 0.35
SRPK1-201ENST00000346162 SF3A3Q12874 501 aaKnown RBP eCLIP17.26■□□□□ 0.352e-10■■■■□ 23.2
SRPK1-201ENST00000346162 ADCY9O60503 1353 aa17.26■□□□□ 0.35
SRPK1-201ENST00000346162 SMIM24O75264 130 aa17.26■□□□□ 0.35
SRPK1-201ENST00000346162 ERCC3P19447 782 aa17.26■□□□□ 0.35
SRPK1-201ENST00000346162 TSNAXIP1Q2TAA8 658 aa17.26■□□□□ 0.35
SRPK1-201ENST00000346162 TTC38Q5R3I4 469 aa17.26■□□□□ 0.35
SRPK1-201ENST00000346162 CCDC24Q8N4L8 307 aa17.26■□□□□ 0.35
SRPK1-201ENST00000346162 STMN4Q9H169 189 aaPredicted RBP17.26■□□□□ 0.35
SRPK1-201ENST00000346162 LRRIQ1Q96JM4 1722 aa17.26■□□□□ 0.35
SRPK1-201ENST00000346162 ABCA6Q8N139 1617 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 ZMYM1Q5SVZ6 1142 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 DESI2Q9BSY9 194 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 NFE2L3Q9Y4A8 694 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 ADGRB3O60242 1522 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 CCT6AP40227 531 aaKnown RBP17.25■□□□□ 0.35
SRPK1-201ENST00000346162 ASAP1Q9ULH1 1129 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 E9PCH4 1651 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 UFL1O94874 794 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 PDIA3P30101 505 aaKnown RBP17.25■□□□□ 0.35
SRPK1-201ENST00000346162 PTPN12Q05209 780 aaKnown RBP17.25■□□□□ 0.35
SRPK1-201ENST00000346162 SCRN1Q12765 414 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 IFNL3Q8IZI9 196 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 MIPOL1Q8TD10 442 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 GREM2Q9H772 168 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 STIM2Q9P246 746 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 MAP3K15Q6ZN16 1313 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 hCG_1642624A0A1W2PR95 340 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 ADORA1P30542 326 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 KIAA1468Q9P260 1216 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 ALKQ9UM73 1620 aa17.25■□□□□ 0.35
SRPK1-201ENST00000346162 SMIM23A6NLE4 172 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 CLTAP09496 248 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 IFT88Q13099 833 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 TRIM68Q6AZZ1 485 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 IRAK4Q9NWZ3 460 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 TSPOAP1O95153 1857 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 PDE8BO95263 885 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms