RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 USP17L18D6R9N7 530 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 USP17L22D6RA61 530 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 USP17L17D6RBQ6 530 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 USP17L19D6RCP7 530 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 USP17L20D6RJB6 530 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 GH2P01242 217 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 BMP8BP34820 402 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 RGS2P41220 211 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 USP17L24Q0WX57 530 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 MAP3K21Q5TCX8 1036 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 GPR153Q6NV75 609 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 LBX2Q6XYB7 198 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 P2RX7Q99572 595 aaKnown RBP15.01□□□□□ -0.01
SGCA-202ENST00000344627 CABP5Q9NP86 173 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 PAG1Q9NWQ8 432 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 OGDHLQ9ULD0 1010 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 RABGAP1Q9Y3P9 1069 aa15.01□□□□□ -0.01
SGCA-202ENST00000344627 ERVK-9P63128 1117 aa15□□□□□ -0.01
SGCA-202ENST00000344627 ERVK-24P63145 666 aa15□□□□□ -0.01
SGCA-202ENST00000344627 RAB3GAP1Q15042 981 aa15□□□□□ -0.01
SGCA-202ENST00000344627 ZYXQ15942 572 aaKnown RBP15□□□□□ -0.01
SGCA-202ENST00000344627 CERKLQ49MI3 558 aaPredicted RBP15□□□□□ -0.01
SGCA-202ENST00000344627 PAWRQ96IZ0 340 aaKnown RBP15□□□□□ -0.01
SGCA-202ENST00000344627 FEZ1Q99689 392 aa15□□□□□ -0.01
SGCA-202ENST00000344627 RIOK1Q9BRS2 568 aaKnown RBP15□□□□□ -0.01
SGCA-202ENST00000344627 DDX24Q9GZR7 859 aaKnown RBP eCLIP15□□□□□ -0.01
SGCA-202ENST00000344627 KIAA1683Q9H0B3 1180 aa15□□□□□ -0.01
SGCA-202ENST00000344627 MCM9Q9NXL9 1143 aa15□□□□□ -0.01
SGCA-202ENST00000344627 MSCO60682 206 aa14.99□□□□□ -0.01
SGCA-202ENST00000344627 ZKSCAN1P17029 563 aaPredicted RBP14.99□□□□□ -0.01
SGCA-202ENST00000344627 ATP5JP18859 108 aa14.99□□□□□ -0.01
SGCA-202ENST00000344627 PLCD1P51178 756 aa14.99□□□□□ -0.01
SGCA-202ENST00000344627 CWC22Q9HCG8 908 aaKnown RBP14.99□□□□□ -0.01
SGCA-202ENST00000344627 RBPJLQ9UBG7 517 aa14.99□□□□□ -0.01
SGCA-202ENST00000344627 NAV1Q8NEY1 1877 aa14.98□□□□□ -0.01
SGCA-202ENST00000344627 MPHOSPH10O00566 681 aaKnown RBP14.98□□□□□ -0.01
SGCA-202ENST00000344627 ABCB5Q2M3G0 1257 aa14.98□□□□□ -0.01
SGCA-202ENST00000344627 SLFNL1Q499Z3 407 aa14.98□□□□□ -0.01
SGCA-202ENST00000344627 PLEKHH3Q7Z736 793 aa14.98□□□□□ -0.01
SGCA-202ENST00000344627 LCORLQ8N3X6 602 aa14.98□□□□□ -0.01
SGCA-202ENST00000344627 SDR42E1Q8WUS8 393 aa14.98□□□□□ -0.01
SGCA-202ENST00000344627 TRIB2Q92519 343 aa14.98□□□□□ -0.01
SGCA-202ENST00000344627 USP6NLQ92738 828 aa14.98□□□□□ -0.01
SGCA-202ENST00000344627 APBA2Q99767 749 aa14.98□□□□□ -0.01
SGCA-202ENST00000344627 HAUS7Q99871 368 aa14.98□□□□□ -0.01
SGCA-202ENST00000344627 C11orf49Q9H6J7 331 aa14.98□□□□□ -0.01
SGCA-202ENST00000344627 ARMT1Q9H993 441 aa14.98□□□□□ -0.01
SGCA-202ENST00000344627 EMILIN3Q9NT22 766 aa14.98□□□□□ -0.01
SGCA-202ENST00000344627 TCRBV5S4A2TA0A5A2 114 aa14.97□□□□□ -0.01
SGCA-202ENST00000344627 CYP2B6P20813 491 aa14.97□□□□□ -0.01
SGCA-202ENST00000344627 MORN1Q5T089 497 aa14.97□□□□□ -0.01
SGCA-202ENST00000344627 GPR142Q7Z601 462 aa14.97□□□□□ -0.01
SGCA-202ENST00000344627 MYH7P12883 1935 aa14.96□□□□□ -0.01
SGCA-202ENST00000344627 MBD4O95243 580 aa14.96□□□□□ -0.01
SGCA-202ENST00000344627 PRKAR2AP13861 404 aaKnown RBP14.96□□□□□ -0.01
SGCA-202ENST00000344627 ADD2P35612 726 aa14.96□□□□□ -0.01
SGCA-202ENST00000344627 MAP2K5Q13163 448 aa14.96□□□□□ -0.01
SGCA-202ENST00000344627 MFSD14CQ5VZR4 134 aa14.96□□□□□ -0.01
SGCA-202ENST00000344627 ZSCAN25Q6NSZ9 544 aa14.96□□□□□ -0.01
SGCA-202ENST00000344627 CATSPERGQ6ZRH7 1159 aa14.96□□□□□ -0.01
SGCA-202ENST00000344627 DDRGK1Q96HY6 314 aa14.96□□□□□ -0.01
SGCA-202ENST00000344627 GPATCH3Q96I76 525 aa14.96□□□□□ -0.01
SGCA-202ENST00000344627 YTHDC1Q96MU7 727 aaKnown RBP14.96□□□□□ -0.01
SGCA-202ENST00000344627 PAGR1Q9BTK6 254 aa14.96□□□□□ -0.01
SGCA-202ENST00000344627 TXNRD2Q9NNW7 524 aa14.96□□□□□ -0.01
SGCA-202ENST00000344627 HOXC10Q9NYD6 342 aa14.96□□□□□ -0.01
SGCA-202ENST00000344627 SWAP70Q9UH65 585 aa14.96□□□□□ -0.01
SGCA-202ENST00000344627 IVNS1ABPQ9Y6Y0 642 aa14.96□□□□□ -0.01
SGCA-202ENST00000344627 BAZ2AQ9UIF9 1905 aaKnown RBP14.96□□□□□ -0.02
SGCA-202ENST00000344627 SLC15A5A6NIM6 579 aa14.95□□□□□ -0.02
SGCA-202ENST00000344627 STRNO43815 780 aa14.95□□□□□ -0.02
SGCA-202ENST00000344627 HOXC6P09630 235 aa14.95□□□□□ -0.02
SGCA-202ENST00000344627 CYP2D6P10635 497 aa14.95□□□□□ -0.02
SGCA-202ENST00000344627 SHMT1P34896 483 aa14.95□□□□□ -0.02
SGCA-202ENST00000344627 AMOTL1Q8IY63 956 aa14.95□□□□□ -0.02
SGCA-202ENST00000344627 GDF15Q99988 308 aa14.95□□□□□ -0.02
SGCA-202ENST00000344627 DCP1AQ9NPI6 582 aaPredicted RBP14.95□□□□□ -0.02
SGCA-202ENST00000344627 MYH8P13535 1937 aa14.95□□□□□ -0.02
SGCA-202ENST00000344627 PRKAB2O43741 272 aa14.94□□□□□ -0.02
SGCA-202ENST00000344627 PEX10O60683 326 aa14.94□□□□□ -0.02
SGCA-202ENST00000344627 EVX2Q03828 476 aa14.94□□□□□ -0.02
SGCA-202ENST00000344627 SEPT2Q15019 361 aa14.94□□□□□ -0.02
SGCA-202ENST00000344627 Q3C1V9 767 aa14.94□□□□□ -0.02
SGCA-202ENST00000344627 MB21D1Q8N884 522 aa14.94□□□□□ -0.02
SGCA-202ENST00000344627 ACER1Q8TDN7 264 aa14.94□□□□□ -0.02
SGCA-202ENST00000344627 LPAR1Q92633 364 aa14.94□□□□□ -0.02
SGCA-202ENST00000344627 DCTPP1Q9H773 170 aa14.94□□□□□ -0.02
SGCA-202ENST00000344627 SH2D4AQ9H788 454 aa14.94□□□□□ -0.02
SGCA-202ENST00000344627 ECHDC1Q9NTX5 307 aa14.94□□□□□ -0.02
SGCA-202ENST00000344627 SLC5A4Q9NY91 659 aa14.94□□□□□ -0.02
SGCA-202ENST00000344627 CHGBP05060 677 aa14.93□□□□□ -0.02
SGCA-202ENST00000344627 COL6A1P12109 1028 aa14.93□□□□□ -0.02
SGCA-202ENST00000344627 VCAM1P19320 739 aa14.93□□□□□ -0.02
SGCA-202ENST00000344627 PTPREP23469 700 aa14.93□□□□□ -0.02
SGCA-202ENST00000344627 GABPAQ06546 454 aa14.93□□□□□ -0.02
SGCA-202ENST00000344627 CACNB2Q08289 660 aaPredicted RBP14.93□□□□□ -0.02
SGCA-202ENST00000344627 LRIT3Q3SXY7 679 aa14.93□□□□□ -0.02
SGCA-202ENST00000344627 TSHZ3Q63HK5 1081 aa14.93□□□□□ -0.02
SGCA-202ENST00000344627 SLC44A5Q8NCS7 719 aa14.93□□□□□ -0.02
SGCA-202ENST00000344627 PORCNQ9H237 461 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms