RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 SMIM22K7EJ46 135 aa26.88■■□□□ 1.89
PBX1-201ENST00000340699 GNRH1P01148 92 aa26.88■■□□□ 1.89
PBX1-201ENST00000340699 BCRP11274 1271 aa26.88■■□□□ 1.89
PBX1-201ENST00000340699 IRX3P78415 501 aaPredicted RBP26.88■■□□□ 1.89
PBX1-201ENST00000340699 ZYXQ15942 572 aaKnown RBP26.88■■□□□ 1.89
PBX1-201ENST00000340699 NAPBQ9H115 298 aa26.88■■□□□ 1.89
PBX1-201ENST00000340699 ASCC2Q9H1I8 757 aaPredicted RBP26.88■■□□□ 1.89
PBX1-201ENST00000340699 MKNK2Q9HBH9 465 aa26.88■■□□□ 1.89
PBX1-201ENST00000340699 EMILIN3Q9NT22 766 aa26.88■■□□□ 1.89
PBX1-201ENST00000340699 PTPN22Q9Y2R2 807 aa26.88■■□□□ 1.89
PBX1-201ENST00000340699 AKR1B1P15121 316 aa26.87■■□□□ 1.89
PBX1-201ENST00000340699 HOXA7P31268 230 aaPredicted RBP26.87■■□□□ 1.89
PBX1-201ENST00000340699 MCMDC2Q4G0Z9 681 aa26.87■■□□□ 1.89
PBX1-201ENST00000340699 CCDC129Q6ZRS4 1044 aa26.87■■□□□ 1.89
PBX1-201ENST00000340699 ACER1Q8TDN7 264 aa26.87■■□□□ 1.89
PBX1-201ENST00000340699 ARHGAP39Q9C0H5 1083 aa26.87■■□□□ 1.89
PBX1-201ENST00000340699 KIAA1683Q9H0B3 1180 aa26.87■■□□□ 1.89
PBX1-201ENST00000340699 ZNF287Q9HBT7 754 aa26.87■■□□□ 1.89
PBX1-201ENST00000340699 ECM2O94769 699 aaPredicted RBP26.86■■□□□ 1.89
PBX1-201ENST00000340699 FMNL1O95466 1100 aaPredicted RBP26.86■■□□□ 1.89
PBX1-201ENST00000340699 PSMC4P43686 418 aa26.86■■□□□ 1.89
PBX1-201ENST00000340699 GCLCP48506 637 aaPredicted RBP26.86■■□□□ 1.89
PBX1-201ENST00000340699 STK11IPQ8N1F8 1099 aa26.86■■□□□ 1.89
PBX1-201ENST00000340699 SLC3A2P08195 630 aaKnown RBP26.85■■□□□ 1.89
PBX1-201ENST00000340699 HOXD10P28358 340 aa26.85■■□□□ 1.89
PBX1-201ENST00000340699 CAP1Q01518 475 aa26.85■■□□□ 1.89
PBX1-201ENST00000340699 ANKRD13CQ8N6S4 541 aa26.85■■□□□ 1.89
PBX1-201ENST00000340699 C12orf42Q96LP6 360 aa26.85■■□□□ 1.89
PBX1-201ENST00000340699 FAM227BQ96M60 508 aa26.85■■□□□ 1.89
PBX1-201ENST00000340699 ARHGEF10LQ9HCE6 1279 aa26.85■■□□□ 1.89
PBX1-201ENST00000340699 ROBO3Q96MS0 1386 aa26.84■■□□□ 1.89
PBX1-201ENST00000340699 SDSP20132 328 aa26.83■■□□□ 1.89
PBX1-201ENST00000340699 PDE4AP27815 886 aa26.83■■□□□ 1.89
PBX1-201ENST00000340699 PRMT2P55345 433 aa26.83■■□□□ 1.89
PBX1-201ENST00000340699 FCGRTP55899 365 aa26.83■■□□□ 1.89
PBX1-201ENST00000340699 ICA1Q05084 483 aa26.83■■□□□ 1.89
PBX1-201ENST00000340699 NMIQ13287 307 aaPredicted RBP26.83■■□□□ 1.89
PBX1-201ENST00000340699 SH2D4AQ9H788 454 aa26.83■■□□□ 1.89
PBX1-201ENST00000340699 A0A0D9SFI3 127 aa26.82■■□□□ 1.88
PBX1-201ENST00000340699 USP17L15C9J2P7 530 aa26.82■■□□□ 1.88
PBX1-201ENST00000340699 USP17L13C9JLJ4 530 aa26.82■■□□□ 1.88
PBX1-201ENST00000340699 USP17L11C9JVI0 530 aa26.82■■□□□ 1.88
PBX1-201ENST00000340699 USP17L18D6R9N7 530 aa26.82■■□□□ 1.88
PBX1-201ENST00000340699 USP17L22D6RA61 530 aa26.82■■□□□ 1.88
PBX1-201ENST00000340699 USP17L17D6RBQ6 530 aa26.82■■□□□ 1.88
PBX1-201ENST00000340699 USP17L19D6RCP7 530 aa26.82■■□□□ 1.88
PBX1-201ENST00000340699 USP17L20D6RJB6 530 aa26.82■■□□□ 1.88
PBX1-201ENST00000340699 HIP1O00291 1037 aa26.82■■□□□ 1.88
PBX1-201ENST00000340699 USP17L24Q0WX57 530 aa26.82■■□□□ 1.88
PBX1-201ENST00000340699 FAM110CQ1W6H9 321 aa26.82■■□□□ 1.88
PBX1-201ENST00000340699 ZNF444Q8N0Y2 327 aaPredicted RBP26.82■■□□□ 1.88
PBX1-201ENST00000340699 P2RX7Q99572 595 aaKnown RBP26.82■■□□□ 1.88
PBX1-201ENST00000340699 KANSL2Q9H9L4 492 aa26.82■■□□□ 1.88
PBX1-201ENST00000340699 MFAP1P55081 439 aaKnown RBP26.81■■□□□ 1.88
PBX1-201ENST00000340699 PDE4BQ07343 736 aa26.81■■□□□ 1.88
PBX1-201ENST00000340699 PPARAQ07869 468 aa26.81■■□□□ 1.88
PBX1-201ENST00000340699 TRIM47Q96LD4 638 aa26.81■■□□□ 1.88
PBX1-201ENST00000340699 DIAPH3Q9NSV4 1193 aa26.81■■□□□ 1.88
PBX1-201ENST00000340699 A0A1W2PRG0 241 aa26.8■■□□□ 1.88
PBX1-201ENST00000340699 RASA1P20936 1047 aa26.8■■□□□ 1.88
PBX1-201ENST00000340699 HERVK_113P62684 666 aa26.8■■□□□ 1.88
PBX1-201ENST00000340699 GTF3C2Q8WUA4 911 aaPredicted RBP26.8■■□□□ 1.88
PBX1-201ENST00000340699 VCAM1P19320 739 aa26.79■■□□□ 1.88
PBX1-201ENST00000340699 CTGFP29279 349 aa26.79■■□□□ 1.88
PBX1-201ENST00000340699 ATP2B2Q01814 1243 aa26.79■■□□□ 1.88
PBX1-201ENST00000340699 VPS53Q5VIR6 699 aa26.79■■□□□ 1.88
PBX1-201ENST00000340699 SRRDQ9UH36 339 aa26.79■■□□□ 1.88
PBX1-201ENST00000340699 PTCH2Q9Y6C5 1203 aa26.79■■□□□ 1.88
PBX1-201ENST00000340699 ZSWIM8A7E2V4 1837 aa26.79■■□□□ 1.88
PBX1-201ENST00000340699 EEF2P13639 858 aaKnown RBP26.78■■□□□ 1.88
PBX1-201ENST00000340699 TTC22Q5TAA0 569 aa26.78■■□□□ 1.88
PBX1-201ENST00000340699 CATSPERGQ6ZRH7 1159 aa26.78■■□□□ 1.88
PBX1-201ENST00000340699 CLEC10AQ8IUN9 316 aa26.78■■□□□ 1.88
PBX1-201ENST00000340699 RPAP3Q9H6T3 665 aaPredicted RBP26.78■■□□□ 1.88
PBX1-201ENST00000340699 TMX2Q9Y320 296 aa26.78■■□□□ 1.88
PBX1-201ENST00000340699 CCDC171Q6TFL3 1326 aa26.78■■□□□ 1.88
PBX1-201ENST00000340699 MYPNQ86TC9 1320 aa26.77■■□□□ 1.88
PBX1-201ENST00000340699 TNPO2O14787 897 aaKnown RBP26.77■■□□□ 1.88
PBX1-201ENST00000340699 PRDM1O75626 825 aa26.77■■□□□ 1.88
PBX1-201ENST00000340699 ALX1Q15699 326 aa26.77■■□□□ 1.88
PBX1-201ENST00000340699 CWC27Q6UX04 472 aaKnown RBP26.77■■□□□ 1.88
PBX1-201ENST00000340699 SIAH1Q8IUQ4 282 aa26.77■■□□□ 1.88
PBX1-201ENST00000340699 LPAR1Q92633 364 aa26.77■■□□□ 1.88
PBX1-201ENST00000340699 FOXP2O15409 715 aa26.76■■□□□ 1.87
PBX1-201ENST00000340699 HSPD1P10809 573 aaKnown RBP26.76■■□□□ 1.87
PBX1-201ENST00000340699 SLC9C1Q4G0N8 1177 aa26.76■■□□□ 1.87
PBX1-201ENST00000340699 NBPF11Q86T75 865 aa26.76■■□□□ 1.87
PBX1-201ENST00000340699 ZNF589Q86UQ0 364 aaPredicted RBP26.76■■□□□ 1.87
PBX1-201ENST00000340699 GPRC5AQ8NFJ5 357 aa26.76■■□□□ 1.87
PBX1-201ENST00000340699 RAET1EQ8TD07 263 aa26.76■■□□□ 1.87
PBX1-201ENST00000340699 MORF4L1Q9UBU8 362 aa26.76■■□□□ 1.87
PBX1-201ENST00000340699 MGAMO43451 1857 aa26.76■■□□□ 1.87
PBX1-201ENST00000340699 COA7Q96BR5 231 aa26.75■■□□□ 1.87
PBX1-201ENST00000340699 VCPKMTQ9H867 229 aa26.75■■□□□ 1.87
PBX1-201ENST00000340699 FGAP02671 866 aa26.74■■□□□ 1.87
PBX1-201ENST00000340699 TSPY3P0CV98 308 aa26.74■■□□□ 1.87
PBX1-201ENST00000340699 TSPY8P0CW00 308 aa26.74■■□□□ 1.87
PBX1-201ENST00000340699 CTDSPL2Q05D32 466 aa26.74■■□□□ 1.87
PBX1-201ENST00000340699 PAGR1Q9BTK6 254 aa26.74■■□□□ 1.87
PBX1-201ENST00000340699 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms