RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 XAGE3Q8WTP9 111 aa19.13■□□□□ 0.65
CDK11B-201ENST00000340677 XAGE2Q96GT9 111 aa19.13■□□□□ 0.65
CDK11B-201ENST00000340677 ZCWPW1Q9H0M4 648 aa19.13■□□□□ 0.65
CDK11B-201ENST00000340677 TFIP11Q9UBB9 837 aaKnown RBP19.13■□□□□ 0.65
CDK11B-201ENST00000340677 CCDC171Q6TFL3 1326 aa19.13■□□□□ 0.65
CDK11B-201ENST00000340677 INPP5BP32019 993 aa19.13■□□□□ 0.65
CDK11B-201ENST00000340677 CLCN2P51788 898 aa19.13■□□□□ 0.65
CDK11B-201ENST00000340677 CLASRPQ8N2M8 674 aaKnown RBP19.13■□□□□ 0.65
CDK11B-201ENST00000340677 BRD8Q9H0E9 1235 aa19.13■□□□□ 0.65
CDK11B-201ENST00000340677 BATF3Q9NR55 127 aa19.13■□□□□ 0.65
CDK11B-201ENST00000340677 CAPN7Q9Y6W3 813 aa19.13■□□□□ 0.65
CDK11B-201ENST00000340677 ERLIN1O75477 346 aa19.12■□□□□ 0.65
CDK11B-201ENST00000340677 GORASP1Q9BQQ3 440 aa19.12■□□□□ 0.65
CDK11B-201ENST00000340677 METTL22Q9BUU2 404 aaPredicted RBP19.12■□□□□ 0.65
CDK11B-201ENST00000340677 YIPF3Q9GZM5 350 aa19.12■□□□□ 0.65
CDK11B-201ENST00000340677 L2HGDHQ9H9P8 463 aa19.12■□□□□ 0.65
CDK11B-201ENST00000340677 SLC39A2Q9NP94 309 aa19.12■□□□□ 0.65
CDK11B-201ENST00000340677 NRBP1Q9UHY1 535 aa19.12■□□□□ 0.65
CDK11B-201ENST00000340677 KIAA0753Q2KHM9 967 aa19.12■□□□□ 0.65
CDK11B-201ENST00000340677 COPS6Q7L5N1 327 aa19.12■□□□□ 0.65
CDK11B-201ENST00000340677 MARCH10Q8NA82 808 aaPredicted RBP19.12■□□□□ 0.65
CDK11B-201ENST00000340677 CLIC6Q96NY7 704 aa19.12■□□□□ 0.65
CDK11B-201ENST00000340677 CCDC85AQ96PX6 553 aaPredicted RBP19.12■□□□□ 0.65
CDK11B-201ENST00000340677 OSBPL9Q96SU4 736 aa19.12■□□□□ 0.65
CDK11B-201ENST00000340677 ATP6V0A4Q9HBG4 840 aa19.12■□□□□ 0.65
CDK11B-201ENST00000340677 SPO11Q9Y5K1 396 aa19.12■□□□□ 0.65
CDK11B-201ENST00000340677 COL15A1P39059 1388 aa19.11■□□□□ 0.65
CDK11B-201ENST00000340677 ANKRD13DQ6ZTN6 518 aa19.11■□□□□ 0.65
CDK11B-201ENST00000340677 RIC3Q7Z5B4 369 aa19.11■□□□□ 0.65
CDK11B-201ENST00000340677 ANKRD13AQ8IZ07 590 aa19.11■□□□□ 0.65
CDK11B-201ENST00000340677 PLBD2Q8NHP8 589 aa19.11■□□□□ 0.65
CDK11B-201ENST00000340677 USP21Q9UK80 565 aa19.11■□□□□ 0.65
CDK11B-201ENST00000340677 ASAP1Q9ULH1 1129 aa19.11■□□□□ 0.65
CDK11B-201ENST00000340677 VIL1P09327 827 aaKnown RBP19.11■□□□□ 0.65
CDK11B-201ENST00000340677 BDNFP23560 247 aa19.11■□□□□ 0.65
CDK11B-201ENST00000340677 HOXD11P31277 338 aaPredicted RBP19.11■□□□□ 0.65
CDK11B-201ENST00000340677 FNTAP49354 379 aa19.11■□□□□ 0.65
CDK11B-201ENST00000340677 HDAC4P56524 1084 aa19.11■□□□□ 0.65
CDK11B-201ENST00000340677 MIS18BP1Q6P0N0 1132 aa19.11■□□□□ 0.65
CDK11B-201ENST00000340677 AMOTL1Q8IY63 956 aa19.11■□□□□ 0.65
CDK11B-201ENST00000340677 CEP57L1Q8IYX8 460 aa19.11■□□□□ 0.65
CDK11B-201ENST00000340677 MAGEC2Q9UBF1 373 aaPredicted RBP19.11■□□□□ 0.65
CDK11B-201ENST00000340677 USP27XA6NNY8 438 aa19.1■□□□□ 0.65
CDK11B-201ENST00000340677 NBPF26B4DH59 902 aa19.1■□□□□ 0.65
CDK11B-201ENST00000340677 PABPC4Q13310 644 aaKnown RBP eCLIP19.1■□□□□ 0.65
CDK11B-201ENST00000340677 MTX1Q13505 466 aa19.1■□□□□ 0.65
CDK11B-201ENST00000340677 NBPF14Q5TI25 921 aa19.1■□□□□ 0.65
CDK11B-201ENST00000340677 ATRNO75882 1429 aa19.1■□□□□ 0.65
CDK11B-201ENST00000340677 MYL6BP14649 208 aa19.1■□□□□ 0.65
CDK11B-201ENST00000340677 GBP2P32456 591 aaPredicted RBP19.1■□□□□ 0.65
CDK11B-201ENST00000340677 G3BP1Q13283 466 aaKnown RBP eCLIP19.1■□□□□ 0.65
CDK11B-201ENST00000340677 ZSCAN25Q6NSZ9 544 aa19.1■□□□□ 0.65
CDK11B-201ENST00000340677 SLF2Q8IX21 1173 aa19.1■□□□□ 0.65
CDK11B-201ENST00000340677 SMYD1Q8NB12 490 aa19.1■□□□□ 0.65
CDK11B-201ENST00000340677 FUT8Q9BYC5 575 aa19.1■□□□□ 0.65
CDK11B-201ENST00000340677 PTCD1O75127 700 aaKnown RBP19.09■□□□□ 0.65
CDK11B-201ENST00000340677 STARD3NLO95772 234 aa19.09■□□□□ 0.65
CDK11B-201ENST00000340677 BTG3Q14201 252 aaPredicted RBP19.09■□□□□ 0.65
CDK11B-201ENST00000340677 LARP1BQ659C4 914 aaKnown RBP19.09■□□□□ 0.65
CDK11B-201ENST00000340677 ANKRD13BQ86YJ7 626 aa19.09■□□□□ 0.65
CDK11B-201ENST00000340677 WDR37Q9Y2I8 494 aa19.09■□□□□ 0.65
CDK11B-201ENST00000340677 NHSQ6T4R5 1651 aa19.09■□□□□ 0.65
CDK11B-201ENST00000340677 CEP57Q86XR8 500 aa19.09■□□□□ 0.65
CDK11B-201ENST00000340677 SSH3Q8TE77 659 aa19.09■□□□□ 0.65
CDK11B-201ENST00000340677 ACBD3Q9H3P7 528 aa19.09■□□□□ 0.65
CDK11B-201ENST00000340677 PAPOLBQ9NRJ5 636 aaKnown RBP19.09■□□□□ 0.65
CDK11B-201ENST00000340677 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.09■□□□□ 0.65
CDK11B-201ENST00000340677 FOSBP53539 338 aa19.08■□□□□ 0.65
CDK11B-201ENST00000340677 RUFY1Q96T51 708 aa19.08■□□□□ 0.65
CDK11B-201ENST00000340677 BICC1Q9H694 974 aaKnown RBP19.08■□□□□ 0.65
CDK11B-201ENST00000340677 TMEM221A6NGB7 291 aa19.08■□□□□ 0.64
CDK11B-201ENST00000340677 EZRP15311 586 aaKnown RBP19.08■□□□□ 0.64
CDK11B-201ENST00000340677 POLA2Q14181 598 aa19.08■□□□□ 0.64
CDK11B-201ENST00000340677 CCDC92Q53HC0 331 aaPredicted RBP19.08■□□□□ 0.64
CDK11B-201ENST00000340677 CEP85LQ5SZL2 805 aa19.08■□□□□ 0.64
CDK11B-201ENST00000340677 MYO1HQ8N1T3 1032 aa19.08■□□□□ 0.64
CDK11B-201ENST00000340677 CCDC102AQ96A19 550 aa19.08■□□□□ 0.64
CDK11B-201ENST00000340677 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.08■□□□□ 0.646e-7■□□□□ 9.7
CDK11B-201ENST00000340677 GINM1Q9NU53 330 aa19.08■□□□□ 0.64
CDK11B-201ENST00000340677 DYTNA2CJ06 578 aa19.07■□□□□ 0.64
CDK11B-201ENST00000340677 GRM8O00222 908 aa19.07■□□□□ 0.64
CDK11B-201ENST00000340677 CREB3O43889 395 aa19.07■□□□□ 0.64
CDK11B-201ENST00000340677 AIMP1Q12904 312 aaKnown RBP19.07■□□□□ 0.64
CDK11B-201ENST00000340677 UBXN4Q92575 508 aa19.07■□□□□ 0.64
CDK11B-201ENST00000340677 UTP14AQ9BVJ6 771 aaKnown RBP19.07■□□□□ 0.64
CDK11B-201ENST00000340677 INCENPQ9NQS7 918 aa19.07■□□□□ 0.64
CDK11B-201ENST00000340677 ANKRD36CQ5JPF3 1778 aa19.07■□□□□ 0.64
CDK11B-201ENST00000340677 PDLIM1O00151 329 aa19.07■□□□□ 0.64
CDK11B-201ENST00000340677 RPSAP08865 295 aaKnown RBP19.07■□□□□ 0.64
CDK11B-201ENST00000340677 COPB2P35606 906 aa19.07■□□□□ 0.64
CDK11B-201ENST00000340677 CCDC93Q567U6 631 aa19.07■□□□□ 0.64
CDK11B-201ENST00000340677 C14orf80Q86SX3 495 aa19.07■□□□□ 0.64
CDK11B-201ENST00000340677 COL5A3P25940 1745 aaPredicted RBP19.06■□□□□ 0.64
CDK11B-201ENST00000340677 NEURL1BA8MQ27 555 aa19.06■□□□□ 0.64
CDK11B-201ENST00000340677 IGKV5-2P06315 115 aa19.06■□□□□ 0.64
CDK11B-201ENST00000340677 SKIDA1Q1XH10 827 aa19.06■□□□□ 0.64
CDK11B-201ENST00000340677 TBC1D9Q6ZT07 1266 aa19.06■□□□□ 0.64
CDK11B-201ENST00000340677 SMARCC1Q92922 1105 aaPredicted RBP19.06■□□□□ 0.64
CDK11B-201ENST00000340677 FAM98CQ17RN3 349 aaKnown RBP19.06■□□□□ 0.64
CDK11B-201ENST00000340677 MEX3CQ5U5Q3 659 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms