RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 CCDC51Q96ER9 411 aa23.04■■□□□ 1.28
RUNX3-202ENST00000338888 CTAGE1Q96RT6 745 aa23.04■■□□□ 1.28
RUNX3-202ENST00000338888 CDHR2Q9BYE9 1310 aa23.04■■□□□ 1.28
RUNX3-202ENST00000338888 MYO1AQ9UBC5 1043 aa23.04■■□□□ 1.28
RUNX3-202ENST00000338888 MAP3K15Q6ZN16 1313 aa23.03■■□□□ 1.28
RUNX3-202ENST00000338888 GGCXP38435 758 aa23.03■■□□□ 1.28
RUNX3-202ENST00000338888 EIF5P55010 431 aaKnown RBP23.03■■□□□ 1.28
RUNX3-202ENST00000338888 SSRP1Q08945 709 aaKnown RBP23.03■■□□□ 1.28
RUNX3-202ENST00000338888 CSRNP2Q9H175 543 aa23.03■■□□□ 1.28
RUNX3-202ENST00000338888 ABHD10Q9NUJ1 306 aa23.03■■□□□ 1.28
RUNX3-202ENST00000338888 CEP126Q9P2H0 1117 aa23.03■■□□□ 1.28
RUNX3-202ENST00000338888 EXOC5O00471 708 aa23.03■■□□□ 1.28
RUNX3-202ENST00000338888 APPP05067 770 aa23.03■■□□□ 1.28
RUNX3-202ENST00000338888 LIG3P49916 1009 aa23.03■■□□□ 1.28
RUNX3-202ENST00000338888 CUL4BQ13620 913 aa23.03■■□□□ 1.28
RUNX3-202ENST00000338888 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.03■■□□□ 1.28
RUNX3-202ENST00000338888 PLBD2Q8NHP8 589 aa23.03■■□□□ 1.28
RUNX3-202ENST00000338888 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.03■■□□□ 1.28
RUNX3-202ENST00000338888 MMS19Q96T76 1030 aa23.03■■□□□ 1.28
RUNX3-202ENST00000338888 NUP88Q99567 741 aaPredicted RBP23.03■■□□□ 1.28
RUNX3-202ENST00000338888 ZC3H4Q9UPT8 1303 aaKnown RBP23.02■■□□□ 1.28
RUNX3-202ENST00000338888 CCT5P48643 541 aa23.02■■□□□ 1.28
RUNX3-202ENST00000338888 SAFBQ15424 915 aaKnown RBP eCLIP23.02■■□□□ 1.28
RUNX3-202ENST00000338888 XAGE2Q96GT9 111 aa23.02■■□□□ 1.28
RUNX3-202ENST00000338888 INCENPQ9NQS7 918 aa23.02■■□□□ 1.28
RUNX3-202ENST00000338888 SRGAP2O75044 1071 aa23.02■■□□□ 1.28
RUNX3-202ENST00000338888 FECHP22830 423 aa23.02■■□□□ 1.28
RUNX3-202ENST00000338888 GSPT2Q8IYD1 628 aaKnown RBP23.02■■□□□ 1.28
RUNX3-202ENST00000338888 COG1Q8WTW3 980 aa23.02■■□□□ 1.28
RUNX3-202ENST00000338888 RABEP2Q9H5N1 569 aa23.02■■□□□ 1.28
RUNX3-202ENST00000338888 NR5A1Q13285 461 aa23.01■■□□□ 1.27
RUNX3-202ENST00000338888 MAP9Q49MG5 647 aa23.01■■□□□ 1.27
RUNX3-202ENST00000338888 MCTP2Q6DN12 878 aa23.01■■□□□ 1.27
RUNX3-202ENST00000338888 CYP26C1Q6V0L0 522 aa23.01■■□□□ 1.27
RUNX3-202ENST00000338888 CCDC82Q8N4S0 544 aa23.01■■□□□ 1.27
RUNX3-202ENST00000338888 KAT2BQ92831 832 aa23.01■■□□□ 1.27
RUNX3-202ENST00000338888 SIPA1L3O60292 1781 aaPredicted RBP23.01■■□□□ 1.27
RUNX3-202ENST00000338888 ERLIN2O94905 339 aa23.01■■□□□ 1.27
RUNX3-202ENST00000338888 MMP1P03956 469 aa23.01■■□□□ 1.27
RUNX3-202ENST00000338888 TTC5Q8N0Z6 440 aa23.01■■□□□ 1.27
RUNX3-202ENST00000338888 CAPZA3Q96KX2 299 aa23.01■■□□□ 1.27
RUNX3-202ENST00000338888 VPS16Q9H269 839 aa23.01■■□□□ 1.27
RUNX3-202ENST00000338888 KAT14Q9H8E8 782 aa23.01■■□□□ 1.27
RUNX3-202ENST00000338888 SRPRBQ9Y5M8 271 aaKnown RBP23.01■■□□□ 1.27
RUNX3-202ENST00000338888 N4BP3O15049 544 aa23■■□□□ 1.27
RUNX3-202ENST00000338888 TRAPPC11Q7Z392 1133 aa23■■□□□ 1.27
RUNX3-202ENST00000338888 IGDCC4Q8TDY8 1250 aa23■■□□□ 1.27
RUNX3-202ENST00000338888 CHP1Q99653 195 aa23■■□□□ 1.27
RUNX3-202ENST00000338888 A0A087X0B3 334 aa23■■□□□ 1.27
RUNX3-202ENST00000338888 RILPL1Q5EBL4 403 aa23■■□□□ 1.27
RUNX3-202ENST00000338888 TMEM67Q5HYA8 995 aa23■■□□□ 1.27
RUNX3-202ENST00000338888 CRACR2AQ9BSW2 395 aa23■■□□□ 1.27
RUNX3-202ENST00000338888 ZNF579Q8NAF0 562 aaKnown RBP22.99■■□□□ 1.27
RUNX3-202ENST00000338888 EHD4Q9H223 541 aa22.99■■□□□ 1.27
RUNX3-202ENST00000338888 LY9Q9HBG7 655 aa22.99■■□□□ 1.27
RUNX3-202ENST00000338888 TFR2Q9UP52 801 aa22.99■■□□□ 1.27
RUNX3-202ENST00000338888 KRT9P35527 623 aa22.99■■□□□ 1.27
RUNX3-202ENST00000338888 EPSTI1Q96J88 318 aa22.99■■□□□ 1.27
RUNX3-202ENST00000338888 ITIH6Q6UXX5 1313 aa22.99■■□□□ 1.27
RUNX3-202ENST00000338888 PPP1R3GB7ZBB8 358 aa22.98■■□□□ 1.27
RUNX3-202ENST00000338888 AGPSO00116 658 aa22.98■■□□□ 1.27
RUNX3-202ENST00000338888 ATP1A1P05023 1023 aaKnown RBP22.98■■□□□ 1.27
RUNX3-202ENST00000338888 TATP17735 454 aaPredicted RBP22.98■■□□□ 1.27
RUNX3-202ENST00000338888 IRAK1P51617 712 aa22.98■■□□□ 1.27
RUNX3-202ENST00000338888 KRT31Q15323 416 aa22.98■■□□□ 1.27
RUNX3-202ENST00000338888 FAM76AQ8TAV0 307 aa22.98■■□□□ 1.27
RUNX3-202ENST00000338888 FAM107BQ9H098 131 aa22.98■■□□□ 1.27
RUNX3-202ENST00000338888 CWC25Q9NXE8 425 aaPredicted RBP22.98■■□□□ 1.27
RUNX3-202ENST00000338888 REXO2Q9Y3B8 237 aaKnown RBP22.98■■□□□ 1.27
RUNX3-202ENST00000338888 FAM169AQ9Y6X4 670 aa22.98■■□□□ 1.27
RUNX3-202ENST00000338888 MYH8P13535 1937 aa22.98■■□□□ 1.27
RUNX3-202ENST00000338888 FMNL1O95466 1100 aaPredicted RBP22.98■■□□□ 1.27
RUNX3-202ENST00000338888 MYBL2P10244 700 aa22.98■■□□□ 1.27
RUNX3-202ENST00000338888 HINFPQ9BQA5 517 aa22.98■■□□□ 1.27
RUNX3-202ENST00000338888 PRDM11Q9NQV5 511 aa22.98■■□□□ 1.27
RUNX3-202ENST00000338888 CTNND2Q9UQB3 1225 aa22.98■■□□□ 1.27
RUNX3-202ENST00000338888 SLC12A7Q9Y666 1083 aa22.98■■□□□ 1.27
RUNX3-202ENST00000338888 MCM3P25205 808 aa22.97■■□□□ 1.27
RUNX3-202ENST00000338888 DPYDQ12882 1025 aa22.97■■□□□ 1.27
RUNX3-202ENST00000338888 PAGE5Q96GU1 130 aa22.97■■□□□ 1.27
RUNX3-202ENST00000338888 TMEM87BQ96K49 555 aa22.97■■□□□ 1.27
RUNX3-202ENST00000338888 SAR1BQ9Y6B6 198 aa22.97■■□□□ 1.27
RUNX3-202ENST00000338888 EPN1Q9Y6I3 576 aaPredicted RBP22.97■■□□□ 1.27
RUNX3-202ENST00000338888 EBAG9O00559 213 aa22.97■■□□□ 1.27
RUNX3-202ENST00000338888 SHOX2O60902 331 aaPredicted RBP22.97■■□□□ 1.27
RUNX3-202ENST00000338888 SWT1Q5T5J6 900 aaKnown RBP22.97■■□□□ 1.27
RUNX3-202ENST00000338888 CMTR1Q8N1G2 835 aaKnown RBP22.97■■□□□ 1.27
RUNX3-202ENST00000338888 STAMQ92783 540 aa22.97■■□□□ 1.27
RUNX3-202ENST00000338888 CABP5Q9NP86 173 aa22.97■■□□□ 1.27
RUNX3-202ENST00000338888 DDX60Q8IY21 1712 aaKnown RBP22.97■■□□□ 1.27
RUNX3-202ENST00000338888 GOLGA6CA6NDK9 693 aa22.96■■□□□ 1.27
RUNX3-202ENST00000338888 CIAO1O76071 339 aa22.96■■□□□ 1.27
RUNX3-202ENST00000338888 GOLGA6DP0CG33 693 aa22.96■■□□□ 1.27
RUNX3-202ENST00000338888 OXER1Q8TDS5 423 aa22.96■■□□□ 1.27
RUNX3-202ENST00000338888 SELENOOQ9BVL4 669 aa22.96■■□□□ 1.27
RUNX3-202ENST00000338888 GOLGA6AQ9NYA3 693 aa22.96■■□□□ 1.27
RUNX3-202ENST00000338888 TAB2Q9NYJ8 693 aa22.96■■□□□ 1.27
RUNX3-202ENST00000338888 KDM6AO15550 1401 aaPredicted RBP22.96■■□□□ 1.27
RUNX3-202ENST00000338888 SEMA3EO15041 775 aa22.96■■□□□ 1.27
RUNX3-202ENST00000338888 NDUFA10O95299 355 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms