RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 PORCNQ9H237 461 aa16.17■□□□□ 0.18
NUDCD3-201ENST00000338427 DCTPP1Q9H773 170 aa16.17■□□□□ 0.18
NUDCD3-201ENST00000338427 LOC285556D6RIA3 1793 aa16.17■□□□□ 0.18
NUDCD3-201ENST00000338427 H0YGN5 161 aa16.16■□□□□ 0.18
NUDCD3-201ENST00000338427 MPHOSPH10O00566 681 aaKnown RBP16.16■□□□□ 0.18
NUDCD3-201ENST00000338427 CNMDO75829 334 aa16.16■□□□□ 0.18
NUDCD3-201ENST00000338427 TFRCP02786 760 aaKnown RBP16.16■□□□□ 0.18
NUDCD3-201ENST00000338427 KIAA1755Q5JYT7 1200 aa16.16■□□□□ 0.18
NUDCD3-201ENST00000338427 CLEC10AQ8IUN9 316 aa16.16■□□□□ 0.18
NUDCD3-201ENST00000338427 SIAH1Q8IUQ4 282 aa16.16■□□□□ 0.18
NUDCD3-201ENST00000338427 GPRC5AQ8NFJ5 357 aa16.16■□□□□ 0.18
NUDCD3-201ENST00000338427 DPF3Q92784 378 aa16.16■□□□□ 0.18
NUDCD3-201ENST00000338427 FEZ1Q99689 392 aa16.16■□□□□ 0.18
NUDCD3-201ENST00000338427 PUS7LQ9H0K6 701 aaKnown RBP16.16■□□□□ 0.18
NUDCD3-201ENST00000338427 CABP5Q9NP86 173 aa16.16■□□□□ 0.18
NUDCD3-201ENST00000338427 CATSPERGQ6ZRH7 1159 aa16.15■□□□□ 0.18
NUDCD3-201ENST00000338427 STK11IPQ8N1F8 1099 aa16.15■□□□□ 0.18
NUDCD3-201ENST00000338427 USP17L15C9J2P7 530 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 USP17L13C9JLJ4 530 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 USP17L12C9JPN9 530 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 USP17L11C9JVI0 530 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 USP17L21D6R901 530 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 USP17L18D6R9N7 530 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 USP17L22D6RA61 530 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 USP17L17D6RBQ6 530 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 USP17L19D6RCP7 530 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 USP17L20D6RJB6 530 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 AKR1B1P15121 316 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 ERVK-9P63128 1117 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 ERVK-24P63145 666 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 USP17L24Q0WX57 530 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 TMED8Q6PL24 325 aaPredicted RBP16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 UBE2Q1Q7Z7E8 422 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 OTUD7AQ8TE49 926 aaPredicted RBP16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 C12orf42Q96LP6 360 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 BTBD7Q9P203 1132 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 SLC4A4Q9Y6R1 1079 aa16.14■□□□□ 0.17
NUDCD3-201ENST00000338427 VCAM1P19320 739 aa16.13■□□□□ 0.17
NUDCD3-201ENST00000338427 UBE3CQ15386 1083 aa16.13■□□□□ 0.17
NUDCD3-201ENST00000338427 CCL14Q16627 93 aa16.13■□□□□ 0.17
NUDCD3-201ENST00000338427 HABP4Q5JVS0 413 aaKnown RBP16.13■□□□□ 0.17
NUDCD3-201ENST00000338427 NKX2-3Q8TAU0 364 aa16.13■□□□□ 0.17
NUDCD3-201ENST00000338427 TRIB2Q92519 343 aa16.13■□□□□ 0.17
NUDCD3-201ENST00000338427 KIAA1683Q9H0B3 1180 aa16.13■□□□□ 0.17
NUDCD3-201ENST00000338427 RPAP3Q9H6T3 665 aaPredicted RBP16.13■□□□□ 0.17
NUDCD3-201ENST00000338427 ECHDC1Q9NTX5 307 aa16.13■□□□□ 0.17
NUDCD3-201ENST00000338427 COLQQ9Y215 455 aaPredicted RBP16.13■□□□□ 0.17
NUDCD3-201ENST00000338427 PLXNB2O15031 1838 aa16.12■□□□□ 0.17
NUDCD3-201ENST00000338427 CDK8P49336 464 aa16.12■□□□□ 0.17
NUDCD3-201ENST00000338427 C12orf60Q5U649 245 aa16.12■□□□□ 0.17
NUDCD3-201ENST00000338427 GPR142Q7Z601 462 aa16.12■□□□□ 0.17
NUDCD3-201ENST00000338427 DIS3LQ8TF46 1054 aaKnown RBP16.12■□□□□ 0.17
NUDCD3-201ENST00000338427 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.12■□□□□ 0.17
NUDCD3-201ENST00000338427 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.12■□□□□ 0.17
NUDCD3-201ENST00000338427 PAK6Q9NQU5 681 aaPredicted RBP16.12■□□□□ 0.17
NUDCD3-201ENST00000338427 FARP2O94887 1054 aaPredicted RBP16.11■□□□□ 0.17
NUDCD3-201ENST00000338427 MORN1Q5T089 497 aa16.11■□□□□ 0.17
NUDCD3-201ENST00000338427 CTR9Q6PD62 1173 aa16.11■□□□□ 0.17
NUDCD3-201ENST00000338427 USP6NLQ92738 828 aa16.11■□□□□ 0.17
NUDCD3-201ENST00000338427 OSBP2Q969R2 916 aa16.11■□□□□ 0.17
NUDCD3-201ENST00000338427 PAWRQ96IZ0 340 aaKnown RBP16.11■□□□□ 0.17
NUDCD3-201ENST00000338427 STRBPQ96SI9 672 aaKnown RBP16.11■□□□□ 0.17
NUDCD3-201ENST00000338427 NUDT12Q9BQG2 462 aa16.11■□□□□ 0.17
NUDCD3-201ENST00000338427 ATP8A2Q9NTI2 1148 aa16.11■□□□□ 0.17
NUDCD3-201ENST00000338427 BAZ2AQ9UIF9 1905 aaKnown RBP16.11■□□□□ 0.17
NUDCD3-201ENST00000338427 USP14P54578 494 aa16.1■□□□□ 0.17
NUDCD3-201ENST00000338427 WDR78Q5VTH9 848 aa16.1■□□□□ 0.17
NUDCD3-201ENST00000338427 SAMD1Q6SPF0 538 aaPredicted RBP16.1■□□□□ 0.17
NUDCD3-201ENST00000338427 PLEKHH3Q7Z736 793 aa16.1■□□□□ 0.17
NUDCD3-201ENST00000338427 CCAR1Q8IX12 1150 aaKnown RBP16.1■□□□□ 0.17
NUDCD3-201ENST00000338427 YTHDC1Q96MU7 727 aaKnown RBP16.1■□□□□ 0.17
NUDCD3-201ENST00000338427 CRBNQ96SW2 442 aa16.1■□□□□ 0.17
NUDCD3-201ENST00000338427 CRISPLD2Q9H0B8 497 aa16.1■□□□□ 0.17
NUDCD3-201ENST00000338427 PCDH10Q9P2E7 1040 aa16.1■□□□□ 0.17
NUDCD3-201ENST00000338427 RABGAP1Q9Y3P9 1069 aa16.1■□□□□ 0.17
NUDCD3-201ENST00000338427 SPDYE16A6NNV3 312 aaPredicted RBP16.09■□□□□ 0.17
NUDCD3-201ENST00000338427 GSG1L2A8MUP6 293 aa16.09■□□□□ 0.17
NUDCD3-201ENST00000338427 HMGCRP04035 888 aa16.09■□□□□ 0.17
NUDCD3-201ENST00000338427 MAPK4P31152 587 aa16.09■□□□□ 0.17
NUDCD3-201ENST00000338427 CACNB2Q08289 660 aaPredicted RBP16.09■□□□□ 0.17
NUDCD3-201ENST00000338427 SPICE1Q8N0Z3 855 aa16.09■□□□□ 0.17
NUDCD3-201ENST00000338427 HMX1Q9NP08 348 aaPredicted RBP16.09■□□□□ 0.17
NUDCD3-201ENST00000338427 FLRT1Q9NZU1 646 aa16.09■□□□□ 0.17
NUDCD3-201ENST00000338427 NAV1Q8NEY1 1877 aa16.09■□□□□ 0.17
NUDCD3-201ENST00000338427 CCND3P30281 292 aaPredicted RBP16.08■□□□□ 0.16
NUDCD3-201ENST00000338427 MNX1P50219 401 aaPredicted RBP16.08■□□□□ 0.16
NUDCD3-201ENST00000338427 ATP2B2Q01814 1243 aa16.08■□□□□ 0.16
NUDCD3-201ENST00000338427 ZSCAN25Q6NSZ9 544 aa16.08■□□□□ 0.16
NUDCD3-201ENST00000338427 TMEM179Q6ZVK1 233 aa16.08■□□□□ 0.16
NUDCD3-201ENST00000338427 KBTBD3Q8NAB2 608 aa16.08■□□□□ 0.16
NUDCD3-201ENST00000338427 SEC62Q99442 399 aaKnown RBP16.08■□□□□ 0.16
NUDCD3-201ENST00000338427 SWAP70Q9UH65 585 aa16.08■□□□□ 0.16
NUDCD3-201ENST00000338427 RPTORQ8N122 1335 aa16.08■□□□□ 0.16
NUDCD3-201ENST00000338427 DDX60LQ5H9U9 1706 aaKnown RBP16.08■□□□□ 0.16
NUDCD3-201ENST00000338427 MINDY4BA8MYZ0 360 aa16.07■□□□□ 0.16
NUDCD3-201ENST00000338427 M0R2C6 588 aa16.07■□□□□ 0.16
NUDCD3-201ENST00000338427 RNF113AO15541 343 aaKnown RBP16.07■□□□□ 0.16
NUDCD3-201ENST00000338427 EEF2P13639 858 aaKnown RBP16.07■□□□□ 0.16
NUDCD3-201ENST00000338427 PRKAR2AP13861 404 aaKnown RBP16.07■□□□□ 0.16
NUDCD3-201ENST00000338427 RRP1P56182 461 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms