RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 EYA3Q99504 573 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 NLRC4Q9NPP4 1024 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 PCDHA5Q9Y5H7 936 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 COMMD10Q9Y6G5 202 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 CHMP2AO43633 222 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 RUFY4Q6ZNE9 571 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 RRAGAQ7L523 313 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 TRIML1Q8N9V2 468 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 SREK1Q8WXA9 508 aaKnown RBP15.31■□□□□ 0.04
RTN4-202ENST00000337526 RPGRIP1Q96KN7 1286 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 PKD2L1Q9P0L9 805 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 CLIC4Q9Y696 253 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 MBD5Q9P267 1494 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 KDM5CP41229 1560 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 INPP5BP32019 993 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 SP4Q02446 784 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 RAD51AP2Q09MP3 1159 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 PAK2Q13177 524 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 C2CD5Q86YS7 1000 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 NELFCDQ8IXH7 590 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 REXO1Q8N1G1 1221 aaKnown RBP15.31■□□□□ 0.04
RTN4-202ENST00000337526 LZTS2Q9BRK4 669 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 TBC1D7Q9P0N9 293 aa15.31■□□□□ 0.04
RTN4-202ENST00000337526 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.31■□□□□ 0.04
RTN4-202ENST00000337526 ADCY9O60503 1353 aa15.3■□□□□ 0.04
RTN4-202ENST00000337526 AATKQ6ZMQ8 1374 aa15.3■□□□□ 0.04
RTN4-202ENST00000337526 MYOM2P54296 1465 aa15.3■□□□□ 0.04
RTN4-202ENST00000337526 BACH1O14867 736 aa15.3■□□□□ 0.04
RTN4-202ENST00000337526 ADCY7P51828 1080 aa15.3■□□□□ 0.04
RTN4-202ENST00000337526 CALCRLQ16602 461 aa15.3■□□□□ 0.04
RTN4-202ENST00000337526 TYW1BQ6NUM6 668 aa15.3■□□□□ 0.04
RTN4-202ENST00000337526 RTEL1Q9NZ71 1219 aa15.3■□□□□ 0.04
RTN4-202ENST00000337526 UTP11Q9Y3A2 253 aaKnown RBP15.3■□□□□ 0.04
RTN4-202ENST00000337526 EFCAB8A8MWE9 144 aa15.3■□□□□ 0.04
RTN4-202ENST00000337526 DPH6Q7L8W6 267 aa15.3■□□□□ 0.04
RTN4-202ENST00000337526 CCDC63Q8NA47 563 aa15.3■□□□□ 0.04
RTN4-202ENST00000337526 ZMYM6O95789 1325 aa15.3■□□□□ 0.04
RTN4-202ENST00000337526 MYCNP04198 464 aaPredicted RBP15.3■□□□□ 0.04
RTN4-202ENST00000337526 PHKG2P15735 406 aa15.3■□□□□ 0.04
RTN4-202ENST00000337526 PROSER3Q2NL68 480 aa15.3■□□□□ 0.04
RTN4-202ENST00000337526 TRAPPC3LQ5T215 181 aa15.3■□□□□ 0.04
RTN4-202ENST00000337526 TLR7Q9NYK1 1049 aaKnown RBP15.3■□□□□ 0.04
RTN4-202ENST00000337526 PSDA5PKW4 1024 aaPredicted RBP15.29■□□□□ 0.04
RTN4-202ENST00000337526 FLOT1O75955 427 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 FERP16591 822 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 BIRC3Q13489 604 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 RPS6KA1Q15418 735 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 CCDC97Q96F63 343 aaPredicted RBP15.29■□□□□ 0.04
RTN4-202ENST00000337526 CCDC87Q9NVE4 849 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 NBPF14Q5TI25 921 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 DNM3Q9UQ16 869 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 YEATS2Q9ULM3 1422 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 ERVV-2B6SEH9 535 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 KCNJ18B7U540 433 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 CALUO43852 315 aaPredicted RBP15.29■□□□□ 0.04
RTN4-202ENST00000337526 SLC1A4P43007 532 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 KCNJ12Q14500 433 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 WHAMMP3Q1A5X7 153 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 MAPKAPK5Q8IW41 473 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 TNKSO95271 1327 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 ATP2A2P16615 1042 aaKnown RBP15.29■□□□□ 0.04
RTN4-202ENST00000337526 CTSWP56202 376 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 GBP6Q6ZN66 633 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 DAAM2Q86T65 1068 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 CERS3Q8IU89 383 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 CACTINQ8WUQ7 758 aaKnown RBP15.29■□□□□ 0.04
RTN4-202ENST00000337526 TSKSQ9UJT2 592 aa15.29■□□□□ 0.04
RTN4-202ENST00000337526 DDX41Q9UJV9 622 aaKnown RBP15.29■□□□□ 0.04
RTN4-202ENST00000337526 TMEM2Q9UHN6 1383 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 KRT5P13647 590 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 SLC39A14Q15043 492 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 ZSCAN26Q16670 478 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 SFMBT2Q5VUG0 894 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 NCAPH2Q6IBW4 605 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 FNBP1Q96RU3 617 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 LTKP29376 864 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 MAP3K9P80192 1104 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 ZNF589Q86UQ0 364 aaPredicted RBP15.28■□□□□ 0.04
RTN4-202ENST00000337526 KIFAP3Q92845 792 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 CABS1Q96KC9 395 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 UIMC1Q96RL1 719 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 NUCKS1Q9H1E3 243 aaKnown RBP15.28■□□□□ 0.04
RTN4-202ENST00000337526 STX10O60499 249 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 DNM2P50570 870 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 SPATA1Q5VX52 437 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 MORC3Q14149 939 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 UBL4BQ8N7F7 174 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 NSUN7Q8NE18 718 aaKnown RBP15.28■□□□□ 0.04
RTN4-202ENST00000337526 SDR42E1Q8WUS8 393 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 CTTNBP2NLQ9P2B4 639 aa15.28■□□□□ 0.04
RTN4-202ENST00000337526 SMCO2A6NFE2 343 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 ALDH3A1P30838 453 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 PPARDQ03181 441 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 ZNF365Q70YC5 407 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 PEX26Q7Z412 305 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 CCDC24Q8N4L8 307 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 PPM1EQ8WY54 764 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 GGA1Q9UJY5 639 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 KDM6BO15054 1643 aa15.27■□□□□ 0.04
RTN4-202ENST00000337526 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.27■□□□□ 0.047e-15■■□□□ 12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms