RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 PLEKHA4Q9H4M7 779 aa16.36■□□□□ 0.21
SNX20-202ENST00000330943 CEP131Q9UPN4 1083 aa16.36■□□□□ 0.21
SNX20-202ENST00000330943 ANKRD65E5RJM6 399 aa16.36■□□□□ 0.21
SNX20-202ENST00000330943 CDC25AP30304 524 aa16.36■□□□□ 0.21
SNX20-202ENST00000330943 LIFRP42702 1097 aa16.36■□□□□ 0.21
SNX20-202ENST00000330943 LRRC31Q6UY01 552 aa16.36■□□□□ 0.21
SNX20-202ENST00000330943 CERS3Q8IU89 383 aa16.36■□□□□ 0.21
SNX20-202ENST00000330943 ZKSCAN3Q9BRR0 538 aa16.36■□□□□ 0.21
SNX20-202ENST00000330943 MYO6Q9UM54 1294 aa16.36■□□□□ 0.21
SNX20-202ENST00000330943 AKAP17AQ02040 695 aaKnown RBP16.35■□□□□ 0.21
SNX20-202ENST00000330943 IFIT5Q13325 482 aaKnown RBP16.35■□□□□ 0.21
SNX20-202ENST00000330943 RTN1Q16799 776 aa16.35■□□□□ 0.21
SNX20-202ENST00000330943 RRP12Q5JTH9 1297 aaKnown RBP16.35■□□□□ 0.21
SNX20-202ENST00000330943 AIDAQ96BJ3 306 aa16.35■□□□□ 0.21
SNX20-202ENST00000330943 CCDC51Q96ER9 411 aa16.35■□□□□ 0.21
SNX20-202ENST00000330943 FAM89AQ96GI7 184 aa16.35■□□□□ 0.21
SNX20-202ENST00000330943 SLF1Q9BQI6 1058 aa16.35■□□□□ 0.21
SNX20-202ENST00000330943 TOMM22Q9NS69 142 aa16.35■□□□□ 0.21
SNX20-202ENST00000330943 EIF3CLB5ME19 914 aaKnown RBP16.35■□□□□ 0.21
SNX20-202ENST00000330943 ARHGAP25P42331 645 aa16.35■□□□□ 0.21
SNX20-202ENST00000330943 BRINP3Q76B58 766 aa16.35■□□□□ 0.21
SNX20-202ENST00000330943 TMTC1Q8IUR5 882 aa16.35■□□□□ 0.21
SNX20-202ENST00000330943 NUP88Q99567 741 aaPredicted RBP16.35■□□□□ 0.21
SNX20-202ENST00000330943 EIF3CQ99613 913 aaKnown RBP16.35■□□□□ 0.21
SNX20-202ENST00000330943 MKRN1Q9UHC7 482 aaKnown RBP16.35■□□□□ 0.21
SNX20-202ENST00000330943 FBXO3Q9UK99 471 aa16.35■□□□□ 0.21
SNX20-202ENST00000330943 CTNND2Q9UQB3 1225 aa16.35■□□□□ 0.21
SNX20-202ENST00000330943 PDE6AP16499 860 aa16.35■□□□□ 0.21
SNX20-202ENST00000330943 MED4Q9NPJ6 270 aa16.35■□□□□ 0.21
SNX20-202ENST00000330943 ABHD10Q9NUJ1 306 aa16.35■□□□□ 0.21
SNX20-202ENST00000330943 ATRNO75882 1429 aa16.35■□□□□ 0.21
SNX20-202ENST00000330943 RNF40O75150 1001 aa16.34■□□□□ 0.21
SNX20-202ENST00000330943 MAGEA9P43362 315 aa16.34■□□□□ 0.21
SNX20-202ENST00000330943 UBE3CQ15386 1083 aa16.34■□□□□ 0.21
SNX20-202ENST00000330943 PAGE5Q96GU1 130 aa16.34■□□□□ 0.21
SNX20-202ENST00000330943 NAPBQ9H115 298 aa16.34■□□□□ 0.21
SNX20-202ENST00000330943 MYO5AQ9Y4I1 1855 aaKnown RBP16.34■□□□□ 0.21
SNX20-202ENST00000330943 ADAMTSL3P82987 1691 aa16.34■□□□□ 0.21
SNX20-202ENST00000330943 RIC1Q4ADV7 1423 aa16.34■□□□□ 0.21
SNX20-202ENST00000330943 FAM205CA6NFA0 338 aa16.34■□□□□ 0.21
SNX20-202ENST00000330943 RNF225M0QZC1 329 aaPredicted RBP16.34■□□□□ 0.21
SNX20-202ENST00000330943 N4BP3O15049 544 aa16.34■□□□□ 0.21
SNX20-202ENST00000330943 TTF1Q15361 905 aaPredicted RBP16.34■□□□□ 0.21
SNX20-202ENST00000330943 CCDC148Q8NFR7 591 aa16.34■□□□□ 0.21
SNX20-202ENST00000330943 STAMQ92783 540 aa16.34■□□□□ 0.21
SNX20-202ENST00000330943 VPS16Q9H269 839 aa16.34■□□□□ 0.21
SNX20-202ENST00000330943 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.21
SNX20-202ENST00000330943 PPP1R3GB7ZBB8 358 aa16.33■□□□□ 0.21
SNX20-202ENST00000330943 DEXIO95424 95 aa16.33■□□□□ 0.21
SNX20-202ENST00000330943 TUBBP07437 444 aa16.33■□□□□ 0.21
SNX20-202ENST00000330943 FECHP22830 423 aa16.33■□□□□ 0.21
SNX20-202ENST00000330943 KRT31Q15323 416 aa16.33■□□□□ 0.21
SNX20-202ENST00000330943 TTC31Q49AM3 519 aaPredicted RBP16.33■□□□□ 0.21
SNX20-202ENST00000330943 CYP26C1Q6V0L0 522 aa16.33■□□□□ 0.21
SNX20-202ENST00000330943 STRBPQ96SI9 672 aaKnown RBP16.33■□□□□ 0.21
SNX20-202ENST00000330943 EPB41L4AQ9HCS5 686 aaPredicted RBP16.33■□□□□ 0.21
SNX20-202ENST00000330943 GUCA1BQ9UMX6 200 aa16.33■□□□□ 0.21
SNX20-202ENST00000330943 TBC1D2BQ9UPU7 963 aa16.33■□□□□ 0.21
SNX20-202ENST00000330943 TACC3Q9Y6A5 838 aa16.33■□□□□ 0.21
SNX20-202ENST00000330943 AKAP11Q9UKA4 1901 aa16.33■□□□□ 0.21
SNX20-202ENST00000330943 ITIH6Q6UXX5 1313 aa16.33■□□□□ 0.2
SNX20-202ENST00000330943 AMPD2Q01433 879 aa16.33■□□□□ 0.2
SNX20-202ENST00000330943 DPYDQ12882 1025 aa16.33■□□□□ 0.2
SNX20-202ENST00000330943 CT47A1Q5JQC4 288 aaPredicted RBP16.33■□□□□ 0.2
SNX20-202ENST00000330943 WDR93Q6P2C0 686 aa16.33■□□□□ 0.2
SNX20-202ENST00000330943 LDHAL6AQ6ZMR3 332 aa16.33■□□□□ 0.2
SNX20-202ENST00000330943 CADPS2Q86UW7 1296 aa16.33■□□□□ 0.2
SNX20-202ENST00000330943 NUP133Q8WUM0 1156 aa16.33■□□□□ 0.2
SNX20-202ENST00000330943 SYMPKQ92797 1274 aaKnown RBP16.33■□□□□ 0.2
SNX20-202ENST00000330943 MYO1AQ9UBC5 1043 aa16.33■□□□□ 0.2
SNX20-202ENST00000330943 TRIM10Q9UDY6 481 aa16.33■□□□□ 0.2
SNX20-202ENST00000330943 MST1RQ04912 1400 aa16.33■□□□□ 0.2
SNX20-202ENST00000330943 TRPM3Q9HCF6 1732 aaPredicted RBP16.33■□□□□ 0.2
SNX20-202ENST00000330943 SEMA3EO15041 775 aa16.32■□□□□ 0.2
SNX20-202ENST00000330943 CTR9Q6PD62 1173 aa16.32■□□□□ 0.2
SNX20-202ENST00000330943 PACS2Q86VP3 889 aa16.32■□□□□ 0.2
SNX20-202ENST00000330943 AATFQ9NY61 560 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNX20-202ENST00000330943 TRIM75PA6NK02 468 aa16.32■□□□□ 0.2
SNX20-202ENST00000330943 ENC1O14682 589 aa16.32■□□□□ 0.2
SNX20-202ENST00000330943 SKIDA1Q1XH10 827 aa16.32■□□□□ 0.2
SNX20-202ENST00000330943 IFNL3Q8IZI9 196 aa16.32■□□□□ 0.2
SNX20-202ENST00000330943 CRACR2BQ8N4Y2 399 aaPredicted RBP16.32■□□□□ 0.2
SNX20-202ENST00000330943 AFAP1L1Q8TED9 768 aa16.32■□□□□ 0.2
SNX20-202ENST00000330943 ISCA1Q9BUE6 129 aa16.32■□□□□ 0.2
SNX20-202ENST00000330943 TAB2Q9NYJ8 693 aa16.32■□□□□ 0.2
SNX20-202ENST00000330943 WDR17Q8IZU2 1322 aa16.32■□□□□ 0.2
SNX20-202ENST00000330943 KRT9P35527 623 aa16.32■□□□□ 0.2
SNX20-202ENST00000330943 WTAPQ15007 396 aa16.32■□□□□ 0.2
SNX20-202ENST00000330943 GSDMAQ96QA5 445 aa16.32■□□□□ 0.2
SNX20-202ENST00000330943 MFSD6Q6ZSS7 791 aa16.31■□□□□ 0.2
SNX20-202ENST00000330943 SH3RF1Q7Z6J0 888 aa16.31■□□□□ 0.2
SNX20-202ENST00000330943 SYNE4Q8N205 404 aa16.31■□□□□ 0.2
SNX20-202ENST00000330943 CNNM1Q9NRU3 951 aa16.31■□□□□ 0.2
SNX20-202ENST00000330943 HDAC6Q9UBN7 1215 aa16.31■□□□□ 0.2
SNX20-202ENST00000330943 MBD4O95243 580 aa16.31■□□□□ 0.2
SNX20-202ENST00000330943 SYF2O95926 243 aaKnown RBP16.31■□□□□ 0.2
SNX20-202ENST00000330943 PHKA1P46020 1223 aa16.31■□□□□ 0.2
SNX20-202ENST00000330943 TCIRG1Q13488 830 aa16.31■□□□□ 0.2
SNX20-202ENST00000330943 AKNAD1Q5T1N1 836 aa16.31■□□□□ 0.2
SNX20-202ENST00000330943 GDAP1L1Q96MZ0 367 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms