RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SLC5A1P13866 664 aa18.47■□□□□ 0.55
CTHRC1-201ENST00000330295 GRB14Q14449 540 aa18.47■□□□□ 0.55
CTHRC1-201ENST00000330295 SKIV2LQ15477 1246 aaKnown RBP18.47■□□□□ 0.55
CTHRC1-201ENST00000330295 RAB30Q15771 203 aa18.47■□□□□ 0.55
CTHRC1-201ENST00000330295 HERVK_113Q902F9 699 aa18.47■□□□□ 0.55
CTHRC1-201ENST00000330295 PHF24Q9UPV7 400 aa18.47■□□□□ 0.55
CTHRC1-201ENST00000330295 CHD7Q9P2D1 2997 aa18.46■□□□□ 0.55
CTHRC1-201ENST00000330295 NHLH1Q02575 133 aa18.46■□□□□ 0.55
CTHRC1-201ENST00000330295 TMEM240Q5SV17 173 aa18.46■□□□□ 0.55
CTHRC1-201ENST00000330295 SLC44A5Q8NCS7 719 aa18.46■□□□□ 0.55
CTHRC1-201ENST00000330295 RABGAP1Q9Y3P9 1069 aa18.46■□□□□ 0.55
CTHRC1-201ENST00000330295 IVNS1ABPQ9Y6Y0 642 aa18.46■□□□□ 0.55
CTHRC1-201ENST00000330295 PI4K2BG5E9Z4 385 aa18.45■□□□□ 0.54
CTHRC1-201ENST00000330295 CNMDO75829 334 aa18.45■□□□□ 0.54
CTHRC1-201ENST00000330295 BTDP43251 543 aa18.45■□□□□ 0.54
CTHRC1-201ENST00000330295 FAM47AQ5JRC9 791 aa18.45■□□□□ 0.54
CTHRC1-201ENST00000330295 CCDC174Q6PII3 467 aa18.45■□□□□ 0.54
CTHRC1-201ENST00000330295 C16orf59Q7L2K0 433 aa18.45■□□□□ 0.54
CTHRC1-201ENST00000330295 LPIN2Q92539 896 aa18.45■□□□□ 0.54
CTHRC1-201ENST00000330295 NKX2-4Q9H2Z4 354 aa18.45■□□□□ 0.54
CTHRC1-201ENST00000330295 SLC28A3Q9HAS3 691 aa18.45■□□□□ 0.54
CTHRC1-201ENST00000330295 PRR33A8MZF0 331 aa18.44■□□□□ 0.54
CTHRC1-201ENST00000330295 USP17L10C9JJH3 530 aa18.44■□□□□ 0.54
CTHRC1-201ENST00000330295 TLL1O43897 1013 aa18.44■□□□□ 0.54
CTHRC1-201ENST00000330295 TIMP1P01033 207 aa18.44■□□□□ 0.54
CTHRC1-201ENST00000330295 FAAP100Q0VG06 881 aa18.44■□□□□ 0.54
CTHRC1-201ENST00000330295 OLFML2BQ68BL8 750 aa18.44■□□□□ 0.54
CTHRC1-201ENST00000330295 FAM163AQ96GL9 167 aaPredicted RBP18.44■□□□□ 0.54
CTHRC1-201ENST00000330295 GBF1Q92538 1859 aa18.43■□□□□ 0.54
CTHRC1-201ENST00000330295 PRRC2BQ5JSZ5 2229 aaKnown RBP18.43■□□□□ 0.54
CTHRC1-201ENST00000330295 ASNSP08243 561 aa18.43■□□□□ 0.54
CTHRC1-201ENST00000330295 DSG3P32926 999 aa18.43■□□□□ 0.54
CTHRC1-201ENST00000330295 PPIGQ13427 754 aaKnown RBP eCLIP18.43■□□□□ 0.54
CTHRC1-201ENST00000330295 RABL6Q3YEC7 729 aaPredicted RBP18.43■□□□□ 0.54
CTHRC1-201ENST00000330295 MFSD5Q6N075 450 aa18.43■□□□□ 0.54
CTHRC1-201ENST00000330295 DZIP1Q86YF9 867 aaKnown RBP18.43■□□□□ 0.54
CTHRC1-201ENST00000330295 SLF2Q8IX21 1173 aa18.43■□□□□ 0.54
CTHRC1-201ENST00000330295 KLHDC4Q8TBB5 520 aa18.43■□□□□ 0.54
CTHRC1-201ENST00000330295 BICC1Q9H694 974 aaKnown RBP18.43■□□□□ 0.54
CTHRC1-201ENST00000330295 GNL3LQ9NVN8 582 aaKnown RBP18.43■□□□□ 0.54
CTHRC1-201ENST00000330295 DCDC2CA8MYV0 355 aa18.42■□□□□ 0.54
CTHRC1-201ENST00000330295 ANP32CO43423 234 aa18.42■□□□□ 0.54
CTHRC1-201ENST00000330295 ALDH1L1O75891 902 aa18.42■□□□□ 0.54
CTHRC1-201ENST00000330295 RHBDL3P58872 404 aa18.42■□□□□ 0.54
CTHRC1-201ENST00000330295 ANKRD33Q7Z3H0 272 aa18.42■□□□□ 0.54
CTHRC1-201ENST00000330295 DPP9Q86TI2 863 aa18.42■□□□□ 0.54
CTHRC1-201ENST00000330295 ZGPATQ8N5A5 531 aaKnown RBP18.42■□□□□ 0.54
CTHRC1-201ENST00000330295 TOX2Q96NM4 488 aa18.42■□□□□ 0.54
CTHRC1-201ENST00000330295 HERC5Q9UII4 1024 aaKnown RBP18.42■□□□□ 0.54
CTHRC1-201ENST00000330295 DENND2AQ9ULE3 1009 aa18.42■□□□□ 0.54
CTHRC1-201ENST00000330295 PSRC1Q6PGN9 363 aaPredicted RBP18.41■□□□□ 0.54
CTHRC1-201ENST00000330295 EMILIN3Q9NT22 766 aa18.41■□□□□ 0.54
CTHRC1-201ENST00000330295 COG5Q9UP83 839 aa18.41■□□□□ 0.54
CTHRC1-201ENST00000330295 YBX2Q9Y2T7 364 aaKnown RBP18.41■□□□□ 0.54
CTHRC1-201ENST00000330295 ZNF236Q9UL36 1845 aa18.41■□□□□ 0.54
CTHRC1-201ENST00000330295 MROH7-TTC4A0A0A0MT08 1334 aa18.41■□□□□ 0.54
CTHRC1-201ENST00000330295 A0A1W2PQ45 241 aaPredicted RBP18.4■□□□□ 0.54
CTHRC1-201ENST00000330295 A0A1W2PQY0 241 aa18.4■□□□□ 0.54
CTHRC1-201ENST00000330295 SEMA3EO15041 775 aa18.4■□□□□ 0.54
CTHRC1-201ENST00000330295 NBPF7P0C2Y1 421 aaPredicted RBP18.4■□□□□ 0.54
CTHRC1-201ENST00000330295 JAG1P78504 1218 aa18.4■□□□□ 0.54
CTHRC1-201ENST00000330295 PRAMEF19Q5SWL8 479 aa18.4■□□□□ 0.54
CTHRC1-201ENST00000330295 ZNF365Q70YC5 407 aa18.4■□□□□ 0.54
CTHRC1-201ENST00000330295 XPNPEP3Q9NQH7 507 aa18.4■□□□□ 0.54
CTHRC1-201ENST00000330295 TBX21Q9UL17 535 aa18.4■□□□□ 0.54
CTHRC1-201ENST00000330295 SMCHD1A6NHR9 2005 aa18.39■□□□□ 0.53
CTHRC1-201ENST00000330295 GPR75-ASB3A0A0A6YYF3 556 aa18.39■□□□□ 0.53
CTHRC1-201ENST00000330295 RNF180Q86T96 592 aa18.39■□□□□ 0.53
CTHRC1-201ENST00000330295 ANKRD44Q8N8A2 993 aa18.39■□□□□ 0.53
CTHRC1-201ENST00000330295 SRCIN1Q9C0H9 1055 aa18.39■□□□□ 0.53
CTHRC1-201ENST00000330295 ACRP10323 421 aa18.38■□□□□ 0.53
CTHRC1-201ENST00000330295 CSF2RAP15509 400 aa18.38■□□□□ 0.53
CTHRC1-201ENST00000330295 ADORA2AP29274 412 aa18.38■□□□□ 0.53
CTHRC1-201ENST00000330295 USP17L2Q6R6M4 530 aa18.38■□□□□ 0.53
CTHRC1-201ENST00000330295 FBXL18Q96ME1 805 aa18.38■□□□□ 0.53
CTHRC1-201ENST00000330295 UIMC1Q96RL1 719 aa18.38■□□□□ 0.53
CTHRC1-201ENST00000330295 CD320Q9NPF0 282 aa18.38■□□□□ 0.53
CTHRC1-201ENST00000330295 BTBD7Q9P203 1132 aa18.38■□□□□ 0.53
CTHRC1-201ENST00000330295 ABCF2Q9UG63 623 aa18.38■□□□□ 0.53
CTHRC1-201ENST00000330295 SIPA1L1O43166 1804 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 USP17L15C9J2P7 530 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 USP17L13C9JLJ4 530 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 USP17L11C9JVI0 530 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 USP17L18D6R9N7 530 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 USP17L22D6RA61 530 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 USP17L17D6RBQ6 530 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 USP17L19D6RCP7 530 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 USP17L20D6RJB6 530 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 RARBP10826 455 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 PHKA1P46020 1223 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 USP17L24Q0WX57 530 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 SHROOM1Q2M3G4 852 aaPredicted RBP18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 PPP2R2DQ66LE6 453 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 KCNH6Q9H252 994 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 MTCH2Q9Y6C9 303 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 ZNF521Q96K83 1311 aa18.37■□□□□ 0.53
CTHRC1-201ENST00000330295 PGK1P00558 417 aa18.36■□□□□ 0.53
CTHRC1-201ENST00000330295 POU3F3P20264 500 aaPredicted RBP18.36■□□□□ 0.53
CTHRC1-201ENST00000330295 SLC4A10Q6U841 1118 aa18.36■□□□□ 0.53
CTHRC1-201ENST00000330295 LBX2Q6XYB7 198 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms