RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 CUTAO60888 179 aa18.18■□□□□ 0.5
SMAD3-201ENST00000327367 GSTO1P78417 241 aa18.18■□□□□ 0.5
SMAD3-201ENST00000327367 NBPF6Q5VWK0 638 aa18.18■□□□□ 0.5
SMAD3-201ENST00000327367 SCYL3Q8IZE3 742 aa18.18■□□□□ 0.5
SMAD3-201ENST00000327367 NBPF4Q96M43 638 aa18.18■□□□□ 0.5
SMAD3-201ENST00000327367 SAP30BPQ9UHR5 308 aaKnown RBP18.18■□□□□ 0.5
SMAD3-201ENST00000327367 ADCY8P40145 1251 aa18.18■□□□□ 0.5
SMAD3-201ENST00000327367 PLCD1P51178 756 aa18.18■□□□□ 0.5
SMAD3-201ENST00000327367 IRX4P78413 519 aa18.18■□□□□ 0.5
SMAD3-201ENST00000327367 CCDC197Q8NCU1 140 aa18.18■□□□□ 0.5
SMAD3-201ENST00000327367 PPP4R1Q8TF05 950 aa18.18■□□□□ 0.5
SMAD3-201ENST00000327367 SYCE1Q8N0S2 351 aa18.18■□□□□ 0.5
SMAD3-201ENST00000327367 FNBP4Q8N3X1 1017 aaPredicted RBP18.18■□□□□ 0.5
SMAD3-201ENST00000327367 PRG4Q92954 1404 aaPredicted RBP18.18■□□□□ 0.5
SMAD3-201ENST00000327367 GPCPD1Q9NPB8 672 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 PTPN22Q9Y2R2 807 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 NDUFB9Q9Y6M9 179 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 RPS6KA2Q15349 733 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 YIPF3Q9GZM5 350 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 HOMER3Q9NSC5 361 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 TSKSQ9UJT2 592 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 IFNB1P01574 187 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 THAP12O43422 761 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 SAT1P21673 171 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 RANBP1P43487 201 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 ZNF827Q17R98 1081 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 LGSNQ5TDP6 509 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 PIK3R5Q8WYR1 880 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 MED4Q9NPJ6 270 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 LARSQ9P2J5 1176 aaKnown RBP18.17■□□□□ 0.5
SMAD3-201ENST00000327367 AMFRQ9UKV5 643 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 V9GY48 417 aaPredicted RBP18.17■□□□□ 0.5
SMAD3-201ENST00000327367 EHBP1L1Q8N3D4 1523 aa18.17■□□□□ 0.5
SMAD3-201ENST00000327367 ZNF622Q969S3 477 aaKnown RBP eCLIP18.17■□□□□ 0.5
SMAD3-201ENST00000327367 C2orf54Q08AI8 447 aa18.16■□□□□ 0.5
SMAD3-201ENST00000327367 DCUN1D2Q6PH85 259 aa18.16■□□□□ 0.5
SMAD3-201ENST00000327367 DCLK2Q8N568 766 aa18.16■□□□□ 0.5
SMAD3-201ENST00000327367 MAP3K21Q5TCX8 1036 aa18.16■□□□□ 0.5
SMAD3-201ENST00000327367 HYOU1Q9Y4L1 999 aa18.16■□□□□ 0.5
SMAD3-201ENST00000327367 CD2APQ9Y5K6 639 aa18.16■□□□□ 0.5
SMAD3-201ENST00000327367 DDX39AO00148 427 aaKnown RBP18.16■□□□□ 0.5
SMAD3-201ENST00000327367 GNA11P29992 359 aa18.16■□□□□ 0.5
SMAD3-201ENST00000327367 RDH13Q8NBN7 331 aa18.16■□□□□ 0.5
SMAD3-201ENST00000327367 EIF6P56537 245 aaKnown RBP18.16■□□□□ 0.5
SMAD3-201ENST00000327367 CUL4BQ13620 913 aa18.16■□□□□ 0.5
SMAD3-201ENST00000327367 TTC38Q5R3I4 469 aa18.16■□□□□ 0.5
SMAD3-201ENST00000327367 CASP2P42575 452 aa18.15■□□□□ 0.5
SMAD3-201ENST00000327367 DIS3L2Q8IYB7 885 aaKnown RBP18.15■□□□□ 0.5
SMAD3-201ENST00000327367 NCAPH2Q6IBW4 605 aa18.15■□□□□ 0.5
SMAD3-201ENST00000327367 LRRC8CQ8TDW0 803 aa18.15■□□□□ 0.5
SMAD3-201ENST00000327367 SCOCQ9UIL1 159 aa18.15■□□□□ 0.5
SMAD3-201ENST00000327367 CCDC152Q4G0S7 254 aa18.15■□□□□ 0.5
SMAD3-201ENST00000327367 CEP70Q8NHQ1 597 aa18.15■□□□□ 0.5
SMAD3-201ENST00000327367 TSC22D3Q99576 134 aa18.15■□□□□ 0.5
SMAD3-201ENST00000327367 ADGRF5Q8IZF2 1346 aa18.15■□□□□ 0.5
SMAD3-201ENST00000327367 KCNJ18B7U540 433 aa18.15■□□□□ 0.5
SMAD3-201ENST00000327367 PPP1R12AO14974 1030 aaPredicted RBP18.15■□□□□ 0.5
SMAD3-201ENST00000327367 GUCY2CP25092 1073 aa18.15■□□□□ 0.5
SMAD3-201ENST00000327367 KCNJ12Q14500 433 aa18.15■□□□□ 0.5
SMAD3-201ENST00000327367 BCAP29Q9UHQ4 241 aa18.15■□□□□ 0.5
SMAD3-201ENST00000327367 BACH1O14867 736 aa18.14■□□□□ 0.5
SMAD3-201ENST00000327367 PARP2Q9UGN5 583 aa18.14■□□□□ 0.5
SMAD3-201ENST00000327367 POC1B-GALNT4F8VUJ3 575 aa18.14■□□□□ 0.49
SMAD3-201ENST00000327367 WDR46O15213 610 aaKnown RBP18.14■□□□□ 0.49
SMAD3-201ENST00000327367 MBD4O95243 580 aa18.14■□□□□ 0.49
SMAD3-201ENST00000327367 ANKRD13CQ8N6S4 541 aa18.14■□□□□ 0.49
SMAD3-201ENST00000327367 SCYL1Q96KG9 808 aa18.14■□□□□ 0.49
SMAD3-201ENST00000327367 RNF8O76064 485 aa18.14■□□□□ 0.49
SMAD3-201ENST00000327367 ANKFY1Q9P2R3 1169 aa18.14■□□□□ 0.49
SMAD3-201ENST00000327367 ANKRD36BQ8N2N9 1353 aa18.14■□□□□ 0.49
SMAD3-201ENST00000327367 A0A087WUV0 522 aaPredicted RBP18.14■□□□□ 0.49
SMAD3-201ENST00000327367 FLOT1O75955 427 aa18.14■□□□□ 0.49
SMAD3-201ENST00000327367 STK10O94804 968 aaKnown RBP18.14■□□□□ 0.49
SMAD3-201ENST00000327367 IL15P40933 162 aaPredicted RBP18.14■□□□□ 0.49
SMAD3-201ENST00000327367 ETF1P62495 437 aaKnown RBP18.14■□□□□ 0.49
SMAD3-201ENST00000327367 INTS9Q9NV88 658 aaKnown RBP18.14■□□□□ 0.49
SMAD3-201ENST00000327367 SH3BGRP55822 239 aaPredicted RBP18.14■□□□□ 0.49
SMAD3-201ENST00000327367 JADE1Q6IE81 842 aa18.14■□□□□ 0.49
SMAD3-201ENST00000327367 TRIM58Q8NG06 486 aa18.14■□□□□ 0.49
SMAD3-201ENST00000327367 GDAP1Q8TB36 358 aa18.14■□□□□ 0.49
SMAD3-201ENST00000327367 PARP1P09874 1014 aaKnown RBP18.13■□□□□ 0.49
SMAD3-201ENST00000327367 BIRC2Q13490 618 aa18.13■□□□□ 0.49
SMAD3-201ENST00000327367 A0A087WWV3 80 aa18.13■□□□□ 0.49
SMAD3-201ENST00000327367 MCTP2Q6DN12 878 aa18.13■□□□□ 0.49
SMAD3-201ENST00000327367 SLC35F6Q8N357 371 aa18.13■□□□□ 0.49
SMAD3-201ENST00000327367 RSAD2Q8WXG1 361 aa18.13■□□□□ 0.49
SMAD3-201ENST00000327367 LOC102724159A0A0B4J2E5 919 aa18.13■□□□□ 0.49
SMAD3-201ENST00000327367 SUN1O94901 812 aa18.13■□□□□ 0.49
SMAD3-201ENST00000327367 SNRPA1P09661 255 aaKnown RBP18.13■□□□□ 0.49
SMAD3-201ENST00000327367 PWP2Q15269 919 aaKnown RBP18.13■□□□□ 0.49
SMAD3-201ENST00000327367 NBPF14Q5TI25 921 aa18.13■□□□□ 0.49
SMAD3-201ENST00000327367 IFT122Q9HBG6 1241 aa18.13■□□□□ 0.49
SMAD3-201ENST00000327367 CCDC141Q6ZP82 1450 aa18.13■□□□□ 0.49
SMAD3-201ENST00000327367 MMEL1Q495T6 779 aa18.13■□□□□ 0.49
SMAD3-201ENST00000327367 GCNT3O95395 438 aa18.13■□□□□ 0.49
SMAD3-201ENST00000327367 DEXIO95424 95 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 CTDSPL2Q05D32 466 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 HERC4Q5GLZ8 1057 aaPredicted RBP18.12■□□□□ 0.49
SMAD3-201ENST00000327367 FCHSD1Q86WN1 690 aa18.12■□□□□ 0.49
SMAD3-201ENST00000327367 VTI1AQ96AJ9 217 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms