RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 DIXDC1Q155Q3 683 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 PALM2Q8IXS6 379 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 LZTS2Q9BRK4 669 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 ORC6Q9Y5N6 252 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 KRIT1O00522 736 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 BAG2O95816 211 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 C2CD5Q86YS7 1000 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 JARID2Q92833 1246 aaPredicted RBP18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 MAPK8IP1Q9UQF2 711 aa18.61■□□□□ 0.57
SMCHD1-201ENST00000320876 NLRP3Q96P20 1036 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 PHEXP78562 749 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 LMBR1LQ6UX01 489 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 KIF11P52732 1056 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 MIGA1Q8NAN2 632 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 SLF1Q9BQI6 1058 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 IBTKQ9P2D0 1353 aaPredicted RBP18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 GCNT3O95395 438 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 SPDL1Q96EA4 605 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 APBA1Q02410 837 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 PPP2R5BQ15173 497 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 PIK3AP1Q6ZUJ8 805 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 TFCP2Q12800 502 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 LONRF3Q496Y0 759 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 RASIP1Q5U651 963 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 IQSEC3Q9UPP2 1182 aaPredicted RBP18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 ZMAT2Q96NC0 199 aaKnown RBP18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 BAG5Q9UL15 447 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 AMOTL2Q9Y2J4 779 aa18.6■□□□□ 0.57
SMCHD1-201ENST00000320876 SLC27A2O14975 620 aa18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 DKC1O60832 514 aaKnown RBP eCLIP18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 TTC38Q5R3I4 469 aa18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 NXNQ6DKJ4 435 aa18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 CARD10Q9BWT7 1032 aa18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 ANKRD2Q9GZV1 360 aa18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 MAP3K5Q99683 1374 aa18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 F8W031 263 aaPredicted RBP18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 COPS6Q7L5N1 327 aa18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 RUNDC3BQ96NL0 473 aa18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 SUN1O94901 812 aa18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 MAGEA1P43355 309 aa18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 ATP1A2P50993 1020 aa18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 YWHAEP62258 255 aaKnown RBP18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 ANKRD42Q8N9B4 389 aa18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 ARHGEF35A5YM69 484 aa18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 P4HA1P13674 534 aa18.59■□□□□ 0.57
SMCHD1-201ENST00000320876 MX2P20592 715 aa18.58■□□□□ 0.57
SMCHD1-201ENST00000320876 BCAS4Q8TDM0 211 aa18.58■□□□□ 0.57
SMCHD1-201ENST00000320876 EIF2AQ9BY44 585 aaKnown RBP18.58■□□□□ 0.57
SMCHD1-201ENST00000320876 PPP2R5CQ13362 524 aa18.58■□□□□ 0.57
SMCHD1-201ENST00000320876 NBPF14Q5TI25 921 aa18.58■□□□□ 0.57
SMCHD1-201ENST00000320876 MRPL46Q9H2W6 279 aaKnown RBP18.58■□□□□ 0.57
SMCHD1-201ENST00000320876 BICC1Q9H694 974 aaKnown RBP18.58■□□□□ 0.57
SMCHD1-201ENST00000320876 ZBTB40Q9NUA8 1239 aa18.58■□□□□ 0.57
SMCHD1-201ENST00000320876 USTQ9Y2C2 406 aa18.58■□□□□ 0.57
SMCHD1-201ENST00000320876 PLCB4Q15147 1175 aa18.58■□□□□ 0.57
SMCHD1-201ENST00000320876 ZNF500O60304 480 aaPredicted RBP18.58■□□□□ 0.56
SMCHD1-201ENST00000320876 DMTNQ08495 405 aa18.58■□□□□ 0.56
SMCHD1-201ENST00000320876 CHMP2AO43633 222 aa18.58■□□□□ 0.56
SMCHD1-201ENST00000320876 MAN1A1P33908 653 aa18.58■□□□□ 0.56
SMCHD1-201ENST00000320876 ANKRD20A4Q4UJ75 823 aa18.58■□□□□ 0.56
SMCHD1-201ENST00000320876 ANKRD20A8PQ5CZ79 823 aa18.58■□□□□ 0.56
SMCHD1-201ENST00000320876 ANKRD20A2Q5SQ80 823 aa18.58■□□□□ 0.56
SMCHD1-201ENST00000320876 ANKRD20A1Q5TYW2 823 aa18.58■□□□□ 0.56
SMCHD1-201ENST00000320876 LINS1Q8NG48 757 aa18.58■□□□□ 0.56
SMCHD1-201ENST00000320876 LIG3P49916 1009 aa18.58■□□□□ 0.56
SMCHD1-201ENST00000320876 PIK3C2GO75747 1445 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 KDM3AQ9Y4C1 1321 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 POLR3AO14802 1390 aaPredicted RBP18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 HARSP12081 509 aaKnown RBP18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 XRCC5P13010 732 aaKnown RBP18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 RAPGEF3O95398 923 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 LRGUKQ96M69 825 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 VEZTQ9HBM0 779 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 RRAGAQ7L523 313 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 LRRC43Q8N309 656 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 GDAP1L1Q96MZ0 367 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 DNM3Q9UQ16 869 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 PLXNC1O60486 1568 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 RNASELQ05823 741 aaKnown RBP18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 NLRP7Q8WX94 980 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 HYOU1Q9Y4L1 999 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 TAB2Q9NYJ8 693 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 ADCY8P40145 1251 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 RBM26Q5T8P6 1007 aaKnown RBP18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 TSC1Q92574 1164 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 ANKFY1Q9P2R3 1169 aa18.57■□□□□ 0.56
SMCHD1-201ENST00000320876 ESRRGP62508 458 aa18.56■□□□□ 0.56
SMCHD1-201ENST00000320876 PA2G4Q9UQ80 394 aaKnown RBP18.56■□□□□ 0.56
SMCHD1-201ENST00000320876 MMEL1Q495T6 779 aa18.56■□□□□ 0.56
SMCHD1-201ENST00000320876 KCNJ18B7U540 433 aa18.56■□□□□ 0.56
SMCHD1-201ENST00000320876 KCNJ12Q14500 433 aa18.56■□□□□ 0.56
SMCHD1-201ENST00000320876 CFAP61Q8NHU2 1237 aa18.56■□□□□ 0.56
SMCHD1-201ENST00000320876 TRIM37O94972 964 aa18.56■□□□□ 0.56
SMCHD1-201ENST00000320876 XPO4Q9C0E2 1151 aaKnown RBP18.56■□□□□ 0.56
SMCHD1-201ENST00000320876 KDM5BQ9UGL1 1544 aa18.56■□□□□ 0.56
SMCHD1-201ENST00000320876 TEKT1Q969V4 418 aa18.56■□□□□ 0.56
SMCHD1-201ENST00000320876 KRT81Q14533 505 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 CTAGE3PQ8IX95 158 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 KIAA0586Q9BVV6 1533 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 220.9 ms