RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 CCDC196A0A1B0GTZ2 297 aa16.94■□□□□ 0.3
TFE3-201ENST00000315869 FANCGO15287 622 aa16.94■□□□□ 0.3
TFE3-201ENST00000315869 KIF5CO60282 957 aa16.94■□□□□ 0.3
TFE3-201ENST00000315869 FMNL1O95466 1100 aaPredicted RBP16.94■□□□□ 0.3
TFE3-201ENST00000315869 CYP7A1P22680 504 aa16.94■□□□□ 0.3
TFE3-201ENST00000315869 PUM3Q15397 648 aaKnown RBP16.94■□□□□ 0.3
TFE3-201ENST00000315869 TC2NQ8N9U0 490 aa16.94■□□□□ 0.3
TFE3-201ENST00000315869 CNNM2Q9H8M5 875 aa16.94■□□□□ 0.3
TFE3-201ENST00000315869 FBXO3Q9UK99 471 aa16.94■□□□□ 0.3
TFE3-201ENST00000315869 CEP131Q9UPN4 1083 aa16.94■□□□□ 0.3
TFE3-201ENST00000315869 SLIT2O94813 1529 aa16.94■□□□□ 0.3
TFE3-201ENST00000315869 GOLGA6L9A6NEM1 432 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 RHOXF2BP0C7M4 288 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 IFNAR1P17181 557 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 ZNF654Q8IZM8 581 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 RHOXF2Q9BQY4 288 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 BLZF1Q9H2G9 400 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 V9GY48 417 aaPredicted RBP16.93■□□□□ 0.3
TFE3-201ENST00000315869 STX10O60499 249 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 PTPREP23469 700 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 TAF3Q5VWG9 929 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 PARD6BQ9BYG5 372 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 RIC1Q4ADV7 1423 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.93■□□□□ 0.3
TFE3-201ENST00000315869 DEXIO95424 95 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 KCNJ6P48051 423 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 FANCBQ8NB91 859 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 LPIN2Q92539 896 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 VPS16Q9H269 839 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.93■□□□□ 0.3
TFE3-201ENST00000315869 LAMA4Q16363 1823 aa16.93■□□□□ 0.3
TFE3-201ENST00000315869 N4BP3O15049 544 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 NTSR2O95665 410 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 GYG1P46976 350 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 GOLGA1Q92805 767 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 PLA2G12BQ9BX93 195 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 MRPL44Q9H9J2 332 aaKnown RBP16.92■□□□□ 0.3
TFE3-201ENST00000315869 KCND1Q9NSA2 647 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 CALCOCO1Q9P1Z2 691 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 FBXO2Q9UK22 296 aaPredicted RBP16.92■□□□□ 0.3
TFE3-201ENST00000315869 SMIM22K7EJ46 135 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 GPS2Q13227 327 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 SMC1AQ14683 1233 aaKnown RBP16.92■□□□□ 0.3
TFE3-201ENST00000315869 SMARCC1Q92922 1105 aaPredicted RBP16.92■□□□□ 0.3
TFE3-201ENST00000315869 CDHR2Q9BYE9 1310 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 CYP2D7A0A087X1C5 515 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 A0A0U1RQJ8 604 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 LMAN1P49257 510 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 RBL2Q08999 1139 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 TICAM2Q86XR7 235 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 ATRIPQ8WXE1 791 aa16.92■□□□□ 0.3
TFE3-201ENST00000315869 NUP88Q99567 741 aaPredicted RBP16.92■□□□□ 0.3
TFE3-201ENST00000315869 IGHMBP2P38935 993 aaKnown RBP16.91■□□□□ 0.3
TFE3-201ENST00000315869 LIFRP42702 1097 aa16.91■□□□□ 0.3
TFE3-201ENST00000315869 SKIDA1Q1XH10 827 aa16.91■□□□□ 0.3
TFE3-201ENST00000315869 SEPT12Q8IYM1 358 aa16.91■□□□□ 0.3
TFE3-201ENST00000315869 ENOX1Q8TC92 643 aaKnown RBP16.91■□□□□ 0.3
TFE3-201ENST00000315869 CELF1Q92879 486 aaKnown RBP16.91■□□□□ 0.3
TFE3-201ENST00000315869 GSG1L2A8MUP6 293 aa16.91■□□□□ 0.3
TFE3-201ENST00000315869 TFRCP02786 760 aaKnown RBP16.91■□□□□ 0.3
TFE3-201ENST00000315869 SGMS1Q86VZ5 419 aa16.91■□□□□ 0.3
TFE3-201ENST00000315869 CTNND2Q9UQB3 1225 aa16.91■□□□□ 0.3
TFE3-201ENST00000315869 LRP6O75581 1613 aa16.91■□□□□ 0.3
TFE3-201ENST00000315869 CCDC152Q4G0S7 254 aa16.9■□□□□ 0.3
TFE3-201ENST00000315869 JAKMIP3Q5VZ66 844 aa16.9■□□□□ 0.3
TFE3-201ENST00000315869 RRAGBQ5VZM2 374 aa16.9■□□□□ 0.3
TFE3-201ENST00000315869 KANK3Q6NY19 840 aa16.9■□□□□ 0.3
TFE3-201ENST00000315869 CRACR2BQ8N4Y2 399 aaPredicted RBP16.9■□□□□ 0.3
TFE3-201ENST00000315869 WDR19Q8NEZ3 1342 aa16.9■□□□□ 0.3
TFE3-201ENST00000315869 SYNRGQ9UMZ2 1314 aa16.9■□□□□ 0.3
TFE3-201ENST00000315869 PHACTR2O75167 634 aa16.9■□□□□ 0.3
TFE3-201ENST00000315869 ZPR1O75312 459 aa16.9■□□□□ 0.3
TFE3-201ENST00000315869 CASP14P31944 242 aa16.9■□□□□ 0.3
TFE3-201ENST00000315869 CHMP4BP1P59074 171 aa16.9■□□□□ 0.3
TFE3-201ENST00000315869 CHRNDQ07001 517 aa16.9■□□□□ 0.3
TFE3-201ENST00000315869 NBPF5PQ86XG9 351 aaPredicted RBP16.9■□□□□ 0.3
TFE3-201ENST00000315869 GPR161Q8N6U8 529 aaKnown RBP16.9■□□□□ 0.3
TFE3-201ENST00000315869 VGLL2Q8N8G2 317 aa16.9■□□□□ 0.3
TFE3-201ENST00000315869 GJD4Q96KN9 370 aaPredicted RBP16.9■□□□□ 0.3
TFE3-201ENST00000315869 KLRK1P26718 216 aa16.9■□□□□ 0.3
TFE3-201ENST00000315869 ST5P78524 1137 aa16.9■□□□□ 0.3
TFE3-201ENST00000315869 CC2D1AQ6P1N0 951 aaPredicted RBP16.9■□□□□ 0.3
TFE3-201ENST00000315869 SYMPKQ92797 1274 aaKnown RBP16.9■□□□□ 0.3
TFE3-201ENST00000315869 BRMS1Q9HCU9 246 aa16.9■□□□□ 0.3
TFE3-201ENST00000315869 TNKSO95271 1327 aa16.89■□□□□ 0.29
TFE3-201ENST00000315869 PLCD1P51178 756 aa16.89■□□□□ 0.29
TFE3-201ENST00000315869 HNRNPH2P55795 449 aaKnown RBP16.89■□□□□ 0.29
TFE3-201ENST00000315869 FAM196AQ6ZSG2 479 aa16.89■□□□□ 0.29
TFE3-201ENST00000315869 EEF2KMTQ96G04 330 aa16.89■□□□□ 0.29
TFE3-201ENST00000315869 TFCP2L1Q9NZI6 479 aa16.89■□□□□ 0.29
TFE3-201ENST00000315869 CDC25AP30304 524 aa16.89■□□□□ 0.29
TFE3-201ENST00000315869 FCHSD1Q86WN1 690 aa16.89■□□□□ 0.29
TFE3-201ENST00000315869 ACRBPQ8NEB7 543 aa16.89■□□□□ 0.29
TFE3-201ENST00000315869 GPR101Q96P66 508 aaPredicted RBP16.89■□□□□ 0.29
TFE3-201ENST00000315869 RNF41Q9H4P4 317 aaPredicted RBP16.89■□□□□ 0.29
TFE3-201ENST00000315869 SASH3O75995 380 aa16.89■□□□□ 0.29
TFE3-201ENST00000315869 TMEM139Q8IV31 216 aa16.89■□□□□ 0.29
TFE3-201ENST00000315869 CERKQ8TCT0 537 aa16.89■□□□□ 0.29
TFE3-201ENST00000315869 CDC5LQ99459 802 aaKnown RBP16.89■□□□□ 0.29
TFE3-201ENST00000315869 TACC3Q9Y6A5 838 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms