RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 FAM110CQ1W6H9 321 aa19.59■□□□□ 0.73
LSM1-201ENST00000311351 USP17L2Q6R6M4 530 aa19.59■□□□□ 0.73
LSM1-201ENST00000311351 CLEC10AQ8IUN9 316 aa19.59■□□□□ 0.73
LSM1-201ENST00000311351 DDRGK1Q96HY6 314 aa19.59■□□□□ 0.73
LSM1-201ENST00000311351 LNPKQ9C0E8 428 aa19.59■□□□□ 0.73
LSM1-201ENST00000311351 SWAP70Q9UH65 585 aa19.59■□□□□ 0.73
LSM1-201ENST00000311351 BRCA2P51587 3418 aa19.59■□□□□ 0.73
LSM1-201ENST00000311351 PDE4DIPQ5VU43 2346 aa19.58■□□□□ 0.73
LSM1-201ENST00000311351 POTEFA5A3E0 1075 aa19.58■□□□□ 0.72
LSM1-201ENST00000311351 PEX10O60683 326 aa19.58■□□□□ 0.72
LSM1-201ENST00000311351 MYCP01106 439 aaPredicted RBP19.58■□□□□ 0.72
LSM1-201ENST00000311351 AKR1B1P15121 316 aa19.58■□□□□ 0.72
LSM1-201ENST00000311351 HOXA7P31268 230 aaPredicted RBP19.58■□□□□ 0.72
LSM1-201ENST00000311351 PRMT2P55345 433 aa19.58■□□□□ 0.72
LSM1-201ENST00000311351 CTR9Q6PD62 1173 aa19.58■□□□□ 0.72
LSM1-201ENST00000311351 AMOTL1Q8IY63 956 aa19.58■□□□□ 0.72
LSM1-201ENST00000311351 SEC62Q99442 399 aaKnown RBP19.58■□□□□ 0.72
LSM1-201ENST00000311351 P2RX7Q99572 595 aaKnown RBP19.58■□□□□ 0.72
LSM1-201ENST00000311351 EPB41L4AQ9HCS5 686 aaPredicted RBP19.58■□□□□ 0.72
LSM1-201ENST00000311351 GABRQQ9UN88 632 aa19.58■□□□□ 0.72
LSM1-201ENST00000311351 GSG1L2A8MUP6 293 aa19.57■□□□□ 0.72
LSM1-201ENST00000311351 TNPO2O14787 897 aaKnown RBP19.57■□□□□ 0.72
LSM1-201ENST00000311351 IGHDP01880 384 aa19.57■□□□□ 0.72
LSM1-201ENST00000311351 HOXD10P28358 340 aa19.57■□□□□ 0.72
LSM1-201ENST00000311351 GCLCP48506 637 aaPredicted RBP19.57■□□□□ 0.72
LSM1-201ENST00000311351 PDE1AP54750 535 aa19.57■□□□□ 0.72
LSM1-201ENST00000311351 B4GALNT3Q6L9W6 998 aa19.57■□□□□ 0.72
LSM1-201ENST00000311351 C16orf86Q6ZW13 317 aa19.57■□□□□ 0.72
LSM1-201ENST00000311351 SMC5Q8IY18 1101 aa19.57■□□□□ 0.72
LSM1-201ENST00000311351 RAET1EQ8TD07 263 aa19.57■□□□□ 0.72
LSM1-201ENST00000311351 C12orf42Q96LP6 360 aa19.57■□□□□ 0.72
LSM1-201ENST00000311351 KIAA1683Q9H0B3 1180 aa19.57■□□□□ 0.72
LSM1-201ENST00000311351 ARPP21Q9UBL0 812 aaPredicted RBP19.57■□□□□ 0.72
LSM1-201ENST00000311351 GREB1LQ9C091 1923 aaPredicted RBP19.57■□□□□ 0.72
LSM1-201ENST00000311351 CDK8P49336 464 aa19.56■□□□□ 0.72
LSM1-201ENST00000311351 HERVK_113P62684 666 aa19.56■□□□□ 0.72
LSM1-201ENST00000311351 TMEM179Q6ZVK1 233 aa19.56■□□□□ 0.72
LSM1-201ENST00000311351 RWDD1Q9H446 243 aaPredicted RBP19.56■□□□□ 0.72
LSM1-201ENST00000311351 STAP2Q9UGK3 403 aa19.56■□□□□ 0.72
LSM1-201ENST00000311351 PLXNB2O15031 1838 aa19.55■□□□□ 0.72
LSM1-201ENST00000311351 A0A1W2PRG0 241 aa19.55■□□□□ 0.72
LSM1-201ENST00000311351 VCAM1P19320 739 aa19.55■□□□□ 0.72
LSM1-201ENST00000311351 USP14P54578 494 aa19.55■□□□□ 0.72
LSM1-201ENST00000311351 IRX6P78412 446 aaPredicted RBP19.55■□□□□ 0.72
LSM1-201ENST00000311351 LRRFIP1Q32MZ4 808 aaKnown RBP19.55■□□□□ 0.72
LSM1-201ENST00000311351 STK11IPQ8N1F8 1099 aa19.55■□□□□ 0.72
LSM1-201ENST00000311351 TXNRD2Q9NNW7 524 aa19.55■□□□□ 0.72
LSM1-201ENST00000311351 MORF4L1Q9UBU8 362 aa19.55■□□□□ 0.72
LSM1-201ENST00000311351 ZMYM1Q5SVZ6 1142 aa19.54■□□□□ 0.72
LSM1-201ENST00000311351 NBPF11Q86T75 865 aa19.54■□□□□ 0.72
LSM1-201ENST00000311351 ROBO3Q96MS0 1386 aa19.54■□□□□ 0.72
LSM1-201ENST00000311351 MINDY4BA8MYZ0 360 aa19.53■□□□□ 0.72
LSM1-201ENST00000311351 GRK4P32298 578 aa19.53■□□□□ 0.72
LSM1-201ENST00000311351 TDO2P48775 406 aa19.53■□□□□ 0.72
LSM1-201ENST00000311351 FLT3LGP49771 235 aa19.53■□□□□ 0.72
LSM1-201ENST00000311351 ICA1Q05084 483 aa19.53■□□□□ 0.72
LSM1-201ENST00000311351 SBK1Q52WX2 424 aa19.53■□□□□ 0.72
LSM1-201ENST00000311351 GIMAP6Q6P9H5 292 aa19.53■□□□□ 0.72
LSM1-201ENST00000311351 POTEEQ6S8J3 1075 aa19.53■□□□□ 0.72
LSM1-201ENST00000311351 CCDC129Q6ZRS4 1044 aa19.53■□□□□ 0.72
LSM1-201ENST00000311351 PAGR1Q9BTK6 254 aa19.53■□□□□ 0.72
LSM1-201ENST00000311351 TAOK2Q9UL54 1235 aa19.53■□□□□ 0.72
LSM1-201ENST00000311351 PARP14Q460N5 1801 aa19.53■□□□□ 0.72
LSM1-201ENST00000311351 RLFQ13129 1914 aa19.53■□□□□ 0.72
LSM1-201ENST00000311351 A0A0G2JMZ2 1700 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 USP17L15C9J2P7 530 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 USP17L13C9JLJ4 530 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 USP17L11C9JVI0 530 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 USP17L18D6R9N7 530 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 USP17L22D6RA61 530 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 USP17L17D6RBQ6 530 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 USP17L19D6RCP7 530 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 USP17L20D6RJB6 530 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 APPP05067 770 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 ELNP15502 786 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 GNAT2P19087 354 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 USP17L24Q0WX57 530 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 MTFR1Q15390 333 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 KIAA1755Q5JYT7 1200 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 CCDC17Q96LX7 622 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 RPAP3Q9H6T3 665 aaPredicted RBP19.52■□□□□ 0.72
LSM1-201ENST00000311351 RBPJLQ9UBG7 517 aa19.52■□□□□ 0.72
LSM1-201ENST00000311351 EN2P19622 333 aaPredicted RBP19.51■□□□□ 0.71
LSM1-201ENST00000311351 CATSPERGQ6ZRH7 1159 aa19.51■□□□□ 0.71
LSM1-201ENST00000311351 CHD1LQ86WJ1 897 aa19.51■□□□□ 0.71
LSM1-201ENST00000311351 SIAH1Q8IUQ4 282 aa19.51■□□□□ 0.71
LSM1-201ENST00000311351 COA7Q96BR5 231 aa19.51■□□□□ 0.71
LSM1-201ENST00000311351 EVI5LQ96CN4 794 aa19.51■□□□□ 0.71
LSM1-201ENST00000311351 TMEM106CQ9BVX2 250 aa19.51■□□□□ 0.71
LSM1-201ENST00000311351 MKI67P46013 3256 aaKnown RBP19.5■□□□□ 0.71
LSM1-201ENST00000311351 ADCY3O60266 1144 aa19.5■□□□□ 0.71
LSM1-201ENST00000311351 ERVK-9P63128 1117 aa19.5■□□□□ 0.71
LSM1-201ENST00000311351 ERVK-24P63145 666 aa19.5■□□□□ 0.71
LSM1-201ENST00000311351 NUCB1Q02818 461 aa19.5■□□□□ 0.71
LSM1-201ENST00000311351 IFNL3Q8IZI9 196 aa19.5■□□□□ 0.71
LSM1-201ENST00000311351 SLAIN1Q8ND83 568 aa19.5■□□□□ 0.71
LSM1-201ENST00000311351 GPRC5AQ8NFJ5 357 aa19.5■□□□□ 0.71
LSM1-201ENST00000311351 ARHGEF10LQ9HCE6 1279 aa19.5■□□□□ 0.71
LSM1-201ENST00000311351 BIN2Q9UBW5 565 aaPredicted RBP19.5■□□□□ 0.71
LSM1-201ENST00000311351 MYH4Q9Y623 1939 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms