RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 ALS2Q96Q42 1657 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 TRIM75PA6NK02 468 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 NUTM2BA6NNL0 878 aaPredicted RBP16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 NUTM2EB1AL46 878 aaPredicted RBP16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 ZNF18P17022 549 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 PTPREP23469 700 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 ADD2P35612 726 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 UBXN1Q04323 297 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 MORC3Q14149 939 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 ACBD3Q9H3P7 528 aa16.28■□□□□ 0.2
SCUBE2-201ENST00000309263 KDM6AO15550 1401 aaPredicted RBP16.27■□□□□ 0.2
SCUBE2-201ENST00000309263 MFAP3LO75121 409 aa16.27■□□□□ 0.2
SCUBE2-201ENST00000309263 DNA2P51530 1060 aa16.27■□□□□ 0.2
SCUBE2-201ENST00000309263 MUM1L1Q5H9M0 696 aa16.27■□□□□ 0.2
SCUBE2-201ENST00000309263 KIAA1328Q86T90 577 aa16.27■□□□□ 0.2
SCUBE2-201ENST00000309263 SLIT3O75094 1523 aa16.27■□□□□ 0.2
SCUBE2-201ENST00000309263 MED1Q15648 1581 aaPredicted RBP16.27■□□□□ 0.2
SCUBE2-201ENST00000309263 CTR9Q6PD62 1173 aa16.27■□□□□ 0.19
SCUBE2-201ENST00000309263 IGDCC4Q8TDY8 1250 aa16.27■□□□□ 0.19
SCUBE2-201ENST00000309263 TMEM87BQ96K49 555 aa16.27■□□□□ 0.19
SCUBE2-201ENST00000309263 CHP1Q99653 195 aa16.27■□□□□ 0.19
SCUBE2-201ENST00000309263 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.27■□□□□ 0.19
SCUBE2-201ENST00000309263 LRRIQ3A6PVS8 624 aaPredicted RBP16.27■□□□□ 0.19
SCUBE2-201ENST00000309263 NTRK3Q16288 839 aa16.27■□□□□ 0.19
SCUBE2-201ENST00000309263 SPATA1Q5VX52 437 aa16.27■□□□□ 0.19
SCUBE2-201ENST00000309263 CNGA4Q8IV77 575 aa16.27■□□□□ 0.19
SCUBE2-201ENST00000309263 CRACR2AQ9BSW2 395 aa16.27■□□□□ 0.19
SCUBE2-201ENST00000309263 JADE2Q9NQC1 790 aa16.27■□□□□ 0.19
SCUBE2-201ENST00000309263 FAM217BQ9NTX9 383 aaPredicted RBP16.27■□□□□ 0.19
SCUBE2-201ENST00000309263 IVLP07476 585 aa16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 ERCC3P19447 782 aa16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 GTF2A1P52655 376 aaPredicted RBP16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 MDM2Q00987 491 aaPredicted RBP16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 MYO6Q9UM54 1294 aa16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 CEP131Q9UPN4 1083 aa16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 SLC4A4Q9Y6R1 1079 aa16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 MARF1Q9Y4F3 1742 aaKnown RBP16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 RNF40O75150 1001 aa16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 GYPCP04921 128 aa16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 IFNL3Q8IZI9 196 aa16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 JAG2Q9Y219 1238 aa16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 A0A087X0B3 334 aa16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 A0A1B0GTH6 734 aa16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 MACROD2A1Z1Q3 448 aa16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 POLD4Q9HCU8 107 aa16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 L1RE1Q9UN81 338 aa16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 V9GY48 417 aaPredicted RBP16.26■□□□□ 0.19
SCUBE2-201ENST00000309263 LTN1O94822 1766 aa16.25■□□□□ 0.19
SCUBE2-201ENST00000309263 CPDO75976 1380 aa16.25■□□□□ 0.19
SCUBE2-201ENST00000309263 POTEB2H3BUK9 544 aa16.25■□□□□ 0.19
SCUBE2-201ENST00000309263 ADAMTS2O95450 1211 aa16.25■□□□□ 0.19
SCUBE2-201ENST00000309263 TTC31Q49AM3 519 aaPredicted RBP16.25■□□□□ 0.19
SCUBE2-201ENST00000309263 CCDC122Q5T0U0 273 aa16.25■□□□□ 0.19
SCUBE2-201ENST00000309263 KANK3Q6NY19 840 aa16.25■□□□□ 0.19
SCUBE2-201ENST00000309263 KIF6Q6ZMV9 814 aa16.25■□□□□ 0.19
SCUBE2-201ENST00000309263 MICALL1Q8N3F8 863 aa16.25■□□□□ 0.19
SCUBE2-201ENST00000309263 GBP3Q9H0R5 595 aa16.25■□□□□ 0.19
SCUBE2-201ENST00000309263 PANX2Q96RD6 677 aa16.25■□□□□ 0.19
SCUBE2-201ENST00000309263 LRP2BPQ9P2M1 347 aa16.25■□□□□ 0.19
SCUBE2-201ENST00000309263 TRMT112Q9UI30 125 aaKnown RBP16.25■□□□□ 0.19
SCUBE2-201ENST00000309263 RNF225M0QZC1 329 aaPredicted RBP16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 MCM7P33993 719 aa16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 EIF3CLB5ME19 914 aaKnown RBP16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 SMIM22K7EJ46 135 aa16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 IPO7O95373 1038 aaKnown RBP16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 FMNL1O95466 1100 aaPredicted RBP16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 PAGE5Q96GU1 130 aa16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 EIF3CQ99613 913 aaKnown RBP16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 TTF2Q9UNY4 1162 aaKnown RBP16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 USP54Q70EL1 1684 aa16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 MAP2K7O14733 419 aa16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 ACTN4O43707 911 aaKnown RBP16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 XBP1P17861 261 aa16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 ERVK-24P63145 666 aa16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 KRT31Q15323 416 aa16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 E2F4Q16254 413 aa16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 SDR42E1Q8WUS8 393 aa16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 CTAGE1Q96RT6 745 aa16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 UBXN6Q9BZV1 441 aa16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 NHSL1Q5SYE7 1610 aa16.24■□□□□ 0.19
SCUBE2-201ENST00000309263 ANKRD18BA2A2Z9 1011 aa16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 EIF5P55010 431 aaKnown RBP16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 KDM3BQ7LBC6 1761 aa16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 CCDC24Q8N4L8 307 aa16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 GNL3LQ9NVN8 582 aaKnown RBP16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 ADD3Q9UEY8 706 aaKnown RBP16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 CIAO1O76071 339 aa16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 EARS2Q5JPH6 523 aaKnown RBP16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 GPATCH11Q8N954 259 aa16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 AFAP1L1Q8TED9 768 aa16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 DEXIO95424 95 aa16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 IBSPP21815 317 aaPredicted RBP16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 MAP3K12Q12852 859 aa16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 AKNAD1Q5T1N1 836 aa16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 NACAP1Q9BZK3 213 aa16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 SRPRBQ9Y5M8 271 aaKnown RBP16.23■□□□□ 0.19
SCUBE2-201ENST00000309263 MYO1BO43795 1136 aa16.22■□□□□ 0.19
SCUBE2-201ENST00000309263 IFNAR1P17181 557 aa16.22■□□□□ 0.19
SCUBE2-201ENST00000309263 STRBPQ96SI9 672 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms