RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 HOXD10P28358 340 aa23.87■■□□□ 1.41
PDZRN3-202ENST00000308537 FLT3LGP49771 235 aa23.87■■□□□ 1.41
PDZRN3-202ENST00000308537 HERVK_113P62684 666 aa23.87■■□□□ 1.41
PDZRN3-202ENST00000308537 RAB3GAP1Q15042 981 aa23.87■■□□□ 1.41
PDZRN3-202ENST00000308537 MTFR1Q15390 333 aa23.87■■□□□ 1.41
PDZRN3-202ENST00000308537 CTR9Q6PD62 1173 aa23.87■■□□□ 1.41
PDZRN3-202ENST00000308537 RBPJLQ9UBG7 517 aa23.87■■□□□ 1.41
PDZRN3-202ENST00000308537 SWAP70Q9UH65 585 aa23.87■■□□□ 1.41
PDZRN3-202ENST00000308537 MX1P20591 662 aa23.86■■□□□ 1.41
PDZRN3-202ENST00000308537 GRK4P32298 578 aa23.86■■□□□ 1.41
PDZRN3-202ENST00000308537 C16orf86Q6ZW13 317 aa23.86■■□□□ 1.41
PDZRN3-202ENST00000308537 NBPF11Q86T75 865 aa23.86■■□□□ 1.41
PDZRN3-202ENST00000308537 EPB41L4AQ9HCS5 686 aaPredicted RBP23.86■■□□□ 1.41
PDZRN3-202ENST00000308537 PARP14Q460N5 1801 aa23.85■■□□□ 1.41
PDZRN3-202ENST00000308537 M0R2C6 588 aa23.85■■□□□ 1.41
PDZRN3-202ENST00000308537 TNPO2O14787 897 aaKnown RBP23.85■■□□□ 1.41
PDZRN3-202ENST00000308537 GLRX3O76003 335 aaKnown RBP23.85■■□□□ 1.41
PDZRN3-202ENST00000308537 AKR1B1P15121 316 aa23.85■■□□□ 1.41
PDZRN3-202ENST00000308537 VCAM1P19320 739 aa23.85■■□□□ 1.41
PDZRN3-202ENST00000308537 CDK8P49336 464 aa23.85■■□□□ 1.41
PDZRN3-202ENST00000308537 IRF5Q13568 498 aa23.85■■□□□ 1.41
PDZRN3-202ENST00000308537 CLEC10AQ8IUN9 316 aa23.85■■□□□ 1.41
PDZRN3-202ENST00000308537 GCC1Q96CN9 775 aa23.85■■□□□ 1.41
PDZRN3-202ENST00000308537 CABP5Q9NP86 173 aa23.85■■□□□ 1.41
PDZRN3-202ENST00000308537 GJD2Q9UKL4 321 aa23.85■■□□□ 1.41
PDZRN3-202ENST00000308537 IRX3P78415 501 aaPredicted RBP23.84■■□□□ 1.41
PDZRN3-202ENST00000308537 AAMPQ13685 434 aa23.84■■□□□ 1.41
PDZRN3-202ENST00000308537 ZYXQ15942 572 aaKnown RBP23.84■■□□□ 1.41
PDZRN3-202ENST00000308537 KIAA1755Q5JYT7 1200 aa23.84■■□□□ 1.41
PDZRN3-202ENST00000308537 SMC5Q8IY18 1101 aa23.84■■□□□ 1.41
PDZRN3-202ENST00000308537 RAET1EQ8TD07 263 aa23.84■■□□□ 1.41
PDZRN3-202ENST00000308537 SEC62Q99442 399 aaKnown RBP23.84■■□□□ 1.41
PDZRN3-202ENST00000308537 STAP2Q9UGK3 403 aa23.84■■□□□ 1.41
PDZRN3-202ENST00000308537 ROBO3Q96MS0 1386 aa23.83■■□□□ 1.41
PDZRN3-202ENST00000308537 GPAA1O43292 621 aa23.83■■□□□ 1.41
PDZRN3-202ENST00000308537 CNMDO75829 334 aa23.83■■□□□ 1.41
PDZRN3-202ENST00000308537 ZFYP08048 801 aaPredicted RBP23.83■■□□□ 1.41
PDZRN3-202ENST00000308537 Q3C1V9 767 aa23.83■■□□□ 1.41
PDZRN3-202ENST00000308537 SBK1Q52WX2 424 aa23.83■■□□□ 1.41
PDZRN3-202ENST00000308537 ANKRD45Q5TZF3 282 aa23.83■■□□□ 1.41
PDZRN3-202ENST00000308537 CATSPERGQ6ZRH7 1159 aa23.83■■□□□ 1.41
PDZRN3-202ENST00000308537 EXOC6Q8TAG9 804 aa23.83■■□□□ 1.41
PDZRN3-202ENST00000308537 SHISA4Q96DD7 197 aa23.83■■□□□ 1.41
PDZRN3-202ENST00000308537 A0A0G2JMZ2 1700 aa23.83■■□□□ 1.41
PDZRN3-202ENST00000308537 ERC2O15083 957 aa23.82■■□□□ 1.4
PDZRN3-202ENST00000308537 MYCP01106 439 aaPredicted RBP23.82■■□□□ 1.4
PDZRN3-202ENST00000308537 USP14P54578 494 aa23.82■■□□□ 1.4
PDZRN3-202ENST00000308537 GIMAP6Q6P9H5 292 aa23.82■■□□□ 1.4
PDZRN3-202ENST00000308537 TMEM179Q6ZVK1 233 aa23.82■■□□□ 1.4
PDZRN3-202ENST00000308537 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.82■■□□□ 1.4
PDZRN3-202ENST00000308537 FOXP2O15409 715 aa23.81■■□□□ 1.4
PDZRN3-202ENST00000308537 PDE1AP54750 535 aa23.81■■□□□ 1.4
PDZRN3-202ENST00000308537 ZMYM1Q5SVZ6 1142 aa23.81■■□□□ 1.4
PDZRN3-202ENST00000308537 LBX2Q6XYB7 198 aa23.81■■□□□ 1.4
PDZRN3-202ENST00000308537 SLAIN1Q8ND83 568 aa23.81■■□□□ 1.4
PDZRN3-202ENST00000308537 PXYLP1Q8TE99 480 aa23.81■■□□□ 1.4
PDZRN3-202ENST00000308537 FEZ1Q99689 392 aa23.81■■□□□ 1.4
PDZRN3-202ENST00000308537 ARPP21Q9UBL0 812 aaPredicted RBP23.81■■□□□ 1.4
PDZRN3-202ENST00000308537 USP17L15C9J2P7 530 aa23.8■■□□□ 1.4
PDZRN3-202ENST00000308537 USP17L13C9JLJ4 530 aa23.8■■□□□ 1.4
PDZRN3-202ENST00000308537 USP17L11C9JVI0 530 aa23.8■■□□□ 1.4
PDZRN3-202ENST00000308537 USP17L18D6R9N7 530 aa23.8■■□□□ 1.4
PDZRN3-202ENST00000308537 USP17L22D6RA61 530 aa23.8■■□□□ 1.4
PDZRN3-202ENST00000308537 USP17L17D6RBQ6 530 aa23.8■■□□□ 1.4
PDZRN3-202ENST00000308537 USP17L19D6RCP7 530 aa23.8■■□□□ 1.4
PDZRN3-202ENST00000308537 USP17L20D6RJB6 530 aa23.8■■□□□ 1.4
PDZRN3-202ENST00000308537 ADCY3O60266 1144 aa23.8■■□□□ 1.4
PDZRN3-202ENST00000308537 IGHDP01880 384 aa23.8■■□□□ 1.4
PDZRN3-202ENST00000308537 ELNP15502 786 aa23.8■■□□□ 1.4
PDZRN3-202ENST00000308537 USP17L24Q0WX57 530 aa23.8■■□□□ 1.4
PDZRN3-202ENST00000308537 TMEM106CQ9BVX2 250 aa23.8■■□□□ 1.4
PDZRN3-202ENST00000308537 PORCNQ9H237 461 aa23.8■■□□□ 1.4
PDZRN3-202ENST00000308537 MPHOSPH10O00566 681 aaKnown RBP23.79■■□□□ 1.4
PDZRN3-202ENST00000308537 ERVK-9P63128 1117 aa23.79■■□□□ 1.4
PDZRN3-202ENST00000308537 ERVK-24P63145 666 aa23.79■■□□□ 1.4
PDZRN3-202ENST00000308537 COA7Q96BR5 231 aa23.79■■□□□ 1.4
PDZRN3-202ENST00000308537 CCDC17Q96LX7 622 aa23.79■■□□□ 1.4
PDZRN3-202ENST00000308537 TMX2Q9Y320 296 aa23.79■■□□□ 1.4
PDZRN3-202ENST00000308537 SPDYE16A6NNV3 312 aaPredicted RBP23.78■■□□□ 1.4
PDZRN3-202ENST00000308537 GPRC5AQ8NFJ5 357 aa23.78■■□□□ 1.4
PDZRN3-202ENST00000308537 RPAP3Q9H6T3 665 aaPredicted RBP23.78■■□□□ 1.4
PDZRN3-202ENST00000308537 CEP290O15078 2479 aa23.78■■□□□ 1.4
PDZRN3-202ENST00000308537 CCL5P13501 91 aa23.77■■□□□ 1.4
PDZRN3-202ENST00000308537 RASA1P20936 1047 aa23.77■■□□□ 1.4
PDZRN3-202ENST00000308537 GTF3C2Q8WUA4 911 aaPredicted RBP23.77■■□□□ 1.4
PDZRN3-202ENST00000308537 USP6NLQ92738 828 aa23.77■■□□□ 1.4
PDZRN3-202ENST00000308537 FSD1Q9BTV5 496 aa23.77■■□□□ 1.4
PDZRN3-202ENST00000308537 INHAP05111 366 aa23.76■■□□□ 1.39
PDZRN3-202ENST00000308537 ICA1Q05084 483 aa23.76■■□□□ 1.39
PDZRN3-202ENST00000308537 DDRGK1Q96HY6 314 aa23.76■■□□□ 1.39
PDZRN3-202ENST00000308537 PAGR1Q9BTK6 254 aa23.76■■□□□ 1.39
PDZRN3-202ENST00000308537 UNC93B1Q9H1C4 597 aa23.76■■□□□ 1.39
PDZRN3-202ENST00000308537 BTBD7Q9P203 1132 aa23.76■■□□□ 1.39
PDZRN3-202ENST00000308537 RABGAP1Q9Y3P9 1069 aa23.76■■□□□ 1.39
PDZRN3-202ENST00000308537 PATL2C9JE40 543 aaKnown RBP23.75■■□□□ 1.39
PDZRN3-202ENST00000308537 GJB1P08034 283 aa23.75■■□□□ 1.39
PDZRN3-202ENST00000308537 GNAT2P19087 354 aa23.75■■□□□ 1.39
PDZRN3-202ENST00000308537 UBE2Q1Q7Z7E8 422 aa23.75■■□□□ 1.39
PDZRN3-202ENST00000308537 AMOTL1Q8IY63 956 aa23.75■■□□□ 1.39
PDZRN3-202ENST00000308537 IFNL3Q8IZI9 196 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms