RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 CDC23Q9UJX2 597 aa20.3■□□□□ 0.84
RETREG1-201ENST00000306320 GYG1P46976 350 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 TDO2P48775 406 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 CEP112Q8N8E3 955 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 NUP88Q99567 741 aaPredicted RBP20.29■□□□□ 0.84
RETREG1-201ENST00000306320 NAPBQ9H115 298 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 SERTAD1Q9UHV2 236 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 STX10O60499 249 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 CASP14P31944 242 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 METAP2P50579 478 aaKnown RBP eCLIP20.29■□□□□ 0.84
RETREG1-201ENST00000306320 PSMB7Q99436 277 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 SLC26A6Q9BXS9 759 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 ACBD3Q9H3P7 528 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 SRCAPQ6ZRS2 3230 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 KIF1AQ12756 1690 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 IKBKBO14920 756 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 YEATS4O95619 227 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 ADD2P35612 726 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 DNA2P51530 1060 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 TMEM67Q5HYA8 995 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 TMEM139Q8IV31 216 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 KCNJ14Q9UNX9 436 aa20.29■□□□□ 0.84
RETREG1-201ENST00000306320 IFIT3O14879 490 aaKnown RBP20.28■□□□□ 0.84
RETREG1-201ENST00000306320 CRKLP46109 303 aaKnown RBP20.28■□□□□ 0.84
RETREG1-201ENST00000306320 KIF23Q02241 960 aaPredicted RBP20.28■□□□□ 0.84
RETREG1-201ENST00000306320 MB21D2Q8IYB1 491 aaPredicted RBP20.28■□□□□ 0.84
RETREG1-201ENST00000306320 VPS16Q9H269 839 aa20.28■□□□□ 0.84
RETREG1-201ENST00000306320 PLEKHG2Q9H7P9 1386 aa20.28■□□□□ 0.84
RETREG1-201ENST00000306320 PDE8AO60658 829 aa20.28■□□□□ 0.84
RETREG1-201ENST00000306320 EVX2Q03828 476 aa20.28■□□□□ 0.84
RETREG1-201ENST00000306320 JMYQ8N9B5 988 aa20.28■□□□□ 0.84
RETREG1-201ENST00000306320 ERLIN2O94905 339 aa20.28■□□□□ 0.84
RETREG1-201ENST00000306320 MYCNP04198 464 aaPredicted RBP20.28■□□□□ 0.84
RETREG1-201ENST00000306320 KCPQ6ZWJ8 1503 aa20.27■□□□□ 0.84
RETREG1-201ENST00000306320 JCADQ9P266 1359 aa20.27■□□□□ 0.84
RETREG1-201ENST00000306320 ECM2O94769 699 aaPredicted RBP20.27■□□□□ 0.84
RETREG1-201ENST00000306320 BMP6P22004 513 aa20.27■□□□□ 0.84
RETREG1-201ENST00000306320 DDB1Q16531 1140 aa20.27■□□□□ 0.84
RETREG1-201ENST00000306320 KRT40Q6A162 431 aa20.27■□□□□ 0.84
RETREG1-201ENST00000306320 KCND1Q9NSA2 647 aa20.27■□□□□ 0.84
RETREG1-201ENST00000306320 POLR3EQ9NVU0 708 aa20.27■□□□□ 0.84
RETREG1-201ENST00000306320 GUCY2CP25092 1073 aa20.27■□□□□ 0.84
RETREG1-201ENST00000306320 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.27■□□□□ 0.84
RETREG1-201ENST00000306320 LCORLQ8N3X6 602 aa20.27■□□□□ 0.84
RETREG1-201ENST00000306320 SPATA5Q8NB90 893 aa20.27■□□□□ 0.84
RETREG1-201ENST00000306320 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.27■□□□□ 0.84
RETREG1-201ENST00000306320 UBXN6Q9BZV1 441 aa20.27■□□□□ 0.84
RETREG1-201ENST00000306320 TACC3Q9Y6A5 838 aa20.27■□□□□ 0.84
RETREG1-201ENST00000306320 ZEB2O60315 1214 aa20.26■□□□□ 0.83
RETREG1-201ENST00000306320 GUCY1A2P33402 732 aa20.26■□□□□ 0.83
RETREG1-201ENST00000306320 ITPK1Q13572 414 aa20.26■□□□□ 0.83
RETREG1-201ENST00000306320 C3orf67Q6ZVT6 689 aa20.26■□□□□ 0.83
RETREG1-201ENST00000306320 CRYBG1Q9Y4K1 1723 aa20.26■□□□□ 0.83
RETREG1-201ENST00000306320 ATP2B2Q01814 1243 aa20.26■□□□□ 0.83
RETREG1-201ENST00000306320 SF3A3Q12874 501 aaKnown RBP eCLIP20.26■□□□□ 0.83
RETREG1-201ENST00000306320 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
RETREG1-201ENST00000306320 ALDH8A1Q9H2A2 487 aaPredicted RBP20.26■□□□□ 0.83
RETREG1-201ENST00000306320 L1RE1Q9UN81 338 aa20.26■□□□□ 0.83
RETREG1-201ENST00000306320 SLC4A4Q9Y6R1 1079 aa20.26■□□□□ 0.83
RETREG1-201ENST00000306320 CCDC148Q8NFR7 591 aa20.26■□□□□ 0.83
RETREG1-201ENST00000306320 BPIFA3Q9BQP9 254 aa20.26■□□□□ 0.83
RETREG1-201ENST00000306320 ZNF274Q96GC6 653 aaPredicted RBP20.25■□□□□ 0.83
RETREG1-201ENST00000306320 ZSWIM5Q9P217 1185 aa20.25■□□□□ 0.83
RETREG1-201ENST00000306320 MAN1B1Q9UKM7 699 aa20.25■□□□□ 0.83
RETREG1-201ENST00000306320 GOLGA8AA7E2F4 631 aa20.25■□□□□ 0.83
RETREG1-201ENST00000306320 SLC39A14Q15043 492 aa20.25■□□□□ 0.83
RETREG1-201ENST00000306320 ATL3Q6DD88 541 aa20.25■□□□□ 0.83
RETREG1-201ENST00000306320 EPB41L4AQ9HCS5 686 aaPredicted RBP20.25■□□□□ 0.83
RETREG1-201ENST00000306320 ADGRG1Q9Y653 693 aa20.25■□□□□ 0.83
RETREG1-201ENST00000306320 MAP2K7O14733 419 aa20.24■□□□□ 0.83
RETREG1-201ENST00000306320 USP49Q70CQ1 688 aa20.24■□□□□ 0.83
RETREG1-201ENST00000306320 NAPGQ99747 312 aaPredicted RBP20.24■□□□□ 0.83
RETREG1-201ENST00000306320 POSTNQ15063 836 aa20.24■□□□□ 0.83
RETREG1-201ENST00000306320 TADA2BQ86TJ2 420 aa20.24■□□□□ 0.83
RETREG1-201ENST00000306320 BCAS4Q8TDM0 211 aa20.24■□□□□ 0.83
RETREG1-201ENST00000306320 SSBP05455 408 aaKnown RBP eCLIP20.24■□□□□ 0.83
RETREG1-201ENST00000306320 ZFYP08048 801 aaPredicted RBP20.24■□□□□ 0.83
RETREG1-201ENST00000306320 KCNJ6P48051 423 aa20.24■□□□□ 0.83
RETREG1-201ENST00000306320 NCAPGQ9BPX3 1015 aa20.24■□□□□ 0.83
RETREG1-201ENST00000306320 RIC1Q4ADV7 1423 aa20.23■□□□□ 0.83
RETREG1-201ENST00000306320 ATP1A2P50993 1020 aa20.23■□□□□ 0.83
RETREG1-201ENST00000306320 BRAPQ7Z569 592 aa20.23■□□□□ 0.83
RETREG1-201ENST00000306320 FAM71BQ8TC56 605 aa20.23■□□□□ 0.83
RETREG1-201ENST00000306320 TFCP2L1Q9NZI6 479 aa20.23■□□□□ 0.83
RETREG1-201ENST00000306320 BAZ2BQ9UIF8 2168 aaKnown RBP20.23■□□□□ 0.83
RETREG1-201ENST00000306320 N4BP3O15049 544 aa20.23■□□□□ 0.83
RETREG1-201ENST00000306320 PUM3Q15397 648 aaKnown RBP20.23■□□□□ 0.83
RETREG1-201ENST00000306320 FAM98CQ17RN3 349 aaKnown RBP20.23■□□□□ 0.83
RETREG1-201ENST00000306320 IFNL3Q8IZI9 196 aa20.23■□□□□ 0.83
RETREG1-201ENST00000306320 ANGEL1Q9UNK9 670 aaKnown RBP20.23■□□□□ 0.83
RETREG1-201ENST00000306320 MRC1P22897 1456 aa20.23■□□□□ 0.83
RETREG1-201ENST00000306320 LOC102724428A0A0B4J2F2 783 aa20.22■□□□□ 0.83
RETREG1-201ENST00000306320 BTBD18B2RXH4 712 aa20.22■□□□□ 0.83
RETREG1-201ENST00000306320 EBAG9O00559 213 aa20.22■□□□□ 0.83
RETREG1-201ENST00000306320 GGCXP38435 758 aa20.22■□□□□ 0.83
RETREG1-201ENST00000306320 SIK1P57059 783 aa20.22■□□□□ 0.83
RETREG1-201ENST00000306320 CORO7P57737 925 aa20.22■□□□□ 0.83
RETREG1-201ENST00000306320 RNF187Q5TA31 235 aaPredicted RBP20.22■□□□□ 0.83
RETREG1-201ENST00000306320 ANKRD20A12PQ8NF67 263 aa20.22■□□□□ 0.83
RETREG1-201ENST00000306320 STRBPQ96SI9 672 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms