RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 HLA-DOAP06340 250 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 PLCG2P16885 1265 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 USP17L24Q0WX57 530 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 ANO1Q5XXA6 986 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 ATF7IPQ6VMQ6 1270 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 DPP9Q86TI2 863 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 FOXP4Q8IVH2 680 aaPredicted RBP12.41□□□□□ -0.42
COL4A3-201ENST00000304990 CDK5RAP2Q96SN8 1893 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 GINM1Q9NU53 330 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 AATFQ9NY61 560 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL4A3-201ENST00000304990 HMG20BQ9P0W2 317 aa12.41□□□□□ -0.42
COL4A3-201ENST00000304990 FOCADQ5VW36 1801 aa12.4□□□□□ -0.42
COL4A3-201ENST00000304990 ANP32CO43423 234 aa12.4□□□□□ -0.42
COL4A3-201ENST00000304990 TFCP2Q12800 502 aa12.4□□□□□ -0.42
COL4A3-201ENST00000304990 DIEXFQ68CQ4 756 aaKnown RBP12.4□□□□□ -0.42
COL4A3-201ENST00000304990 IL27Q8NEV9 243 aa12.4□□□□□ -0.42
COL4A3-201ENST00000304990 NPLOC4Q8TAT6 608 aa12.4□□□□□ -0.42
COL4A3-201ENST00000304990 ZNF384Q8TF68 577 aa12.4□□□□□ -0.42
COL4A3-201ENST00000304990 TGFBRAP1Q8WUH2 860 aa12.4□□□□□ -0.42
COL4A3-201ENST00000304990 PPM1EQ8WY54 764 aa12.4□□□□□ -0.42
COL4A3-201ENST00000304990 FERMT2Q96AC1 680 aa12.4□□□□□ -0.42
COL4A3-201ENST00000304990 EMILIN3Q9NT22 766 aa12.4□□□□□ -0.42
COL4A3-201ENST00000304990 SAP30BPQ9UHR5 308 aaKnown RBP12.4□□□□□ -0.42
COL4A3-201ENST00000304990 USP14P54578 494 aa12.39□□□□□ -0.43
COL4A3-201ENST00000304990 JAG1P78504 1218 aa12.39□□□□□ -0.43
COL4A3-201ENST00000304990 SHROOM1Q2M3G4 852 aaPredicted RBP12.39□□□□□ -0.43
COL4A3-201ENST00000304990 NAA16Q6N069 864 aaPredicted RBP12.39□□□□□ -0.43
COL4A3-201ENST00000304990 PI16Q6UXB8 463 aa12.39□□□□□ -0.43
COL4A3-201ENST00000304990 SSH1Q8WYL5 1049 aa12.39□□□□□ -0.43
COL4A3-201ENST00000304990 FAM122AQ96E09 287 aa12.39□□□□□ -0.43
COL4A3-201ENST00000304990 COPRSQ9NQ92 184 aa12.39□□□□□ -0.43
COL4A3-201ENST00000304990 PDLIM7Q9NR12 457 aa12.39□□□□□ -0.43
COL4A3-201ENST00000304990 PALD1Q9ULE6 856 aa12.39□□□□□ -0.43
COL4A3-201ENST00000304990 GH2P01242 217 aa12.38□□□□□ -0.43
COL4A3-201ENST00000304990 RAG1P15918 1043 aa12.38□□□□□ -0.43
COL4A3-201ENST00000304990 ADCYAP1R1P41586 468 aa12.38□□□□□ -0.43
COL4A3-201ENST00000304990 GRB14Q14449 540 aa12.38□□□□□ -0.43
COL4A3-201ENST00000304990 RAB3GAP1Q15042 981 aa12.38□□□□□ -0.43
COL4A3-201ENST00000304990 SH3RF1Q7Z6J0 888 aa12.38□□□□□ -0.43
COL4A3-201ENST00000304990 FAM9BQ8IZU0 186 aa12.38□□□□□ -0.43
COL4A3-201ENST00000304990 TRPV1Q8NER1 839 aa12.38□□□□□ -0.43
COL4A3-201ENST00000304990 GAS2L1Q99501 681 aaPredicted RBP12.38□□□□□ -0.43
COL4A3-201ENST00000304990 SMC4Q9NTJ3 1288 aa12.38□□□□□ -0.43
COL4A3-201ENST00000304990 SLC5A4Q9NY91 659 aa12.38□□□□□ -0.43
COL4A3-201ENST00000304990 RAPGEFL1Q9UHV5 662 aa12.38□□□□□ -0.43
COL4A3-201ENST00000304990 TACC3Q9Y6A5 838 aa12.38□□□□□ -0.43
COL4A3-201ENST00000304990 MYH1P12882 1939 aa12.38□□□□□ -0.43
COL4A3-201ENST00000304990 FLT1P17948 1338 aa12.37□□□□□ -0.43
COL4A3-201ENST00000304990 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.37□□□□□ -0.43
COL4A3-201ENST00000304990 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.37□□□□□ -0.43
COL4A3-201ENST00000304990 CNMDO75829 334 aa12.37□□□□□ -0.43
COL4A3-201ENST00000304990 HOXC6P09630 235 aa12.37□□□□□ -0.43
COL4A3-201ENST00000304990 UQCRFS1P1P0C7P4 283 aa12.37□□□□□ -0.43
COL4A3-201ENST00000304990 CYBAP13498 195 aa12.37□□□□□ -0.43
COL4A3-201ENST00000304990 GRIN2CQ14957 1233 aa12.37□□□□□ -0.43
COL4A3-201ENST00000304990 CATSPERGQ6ZRH7 1159 aa12.37□□□□□ -0.43
COL4A3-201ENST00000304990 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
COL4A3-201ENST00000304990 DNAJC18Q9H819 358 aa12.37□□□□□ -0.43
COL4A3-201ENST00000304990 TRIM43BA6NCK2 446 aa12.36□□□□□ -0.43
COL4A3-201ENST00000304990 HAX1O00165 279 aa12.36□□□□□ -0.43
COL4A3-201ENST00000304990 SEPT4O43236 478 aa12.36□□□□□ -0.43
COL4A3-201ENST00000304990 SRGAP3O43295 1099 aa12.36□□□□□ -0.43
COL4A3-201ENST00000304990 CLTBP09497 229 aa12.36□□□□□ -0.43
COL4A3-201ENST00000304990 DNAJB2P25686 324 aa12.36□□□□□ -0.43
COL4A3-201ENST00000304990 TLE2Q04725 743 aa12.36□□□□□ -0.43
COL4A3-201ENST00000304990 FPGSQ05932 587 aa12.36□□□□□ -0.43
COL4A3-201ENST00000304990 OLFML2BQ68BL8 750 aa12.36□□□□□ -0.43
COL4A3-201ENST00000304990 POTEEQ6S8J3 1075 aa12.36□□□□□ -0.43
COL4A3-201ENST00000304990 USP38Q8NB14 1042 aa12.36□□□□□ -0.43
COL4A3-201ENST00000304990 TRIM43Q96BQ3 446 aaPredicted RBP12.36□□□□□ -0.43
COL4A3-201ENST00000304990 ZNF576Q9H609 170 aa12.36□□□□□ -0.43
COL4A3-201ENST00000304990 CABP5Q9NP86 173 aa12.36□□□□□ -0.43
COL4A3-201ENST00000304990 BTBD7Q9P203 1132 aa12.36□□□□□ -0.43
COL4A3-201ENST00000304990 ZNF236Q9UL36 1845 aa12.35□□□□□ -0.43
COL4A3-201ENST00000304990 STRNO43815 780 aa12.35□□□□□ -0.43
COL4A3-201ENST00000304990 PQBP1O60828 265 aaKnown RBP12.35□□□□□ -0.43
COL4A3-201ENST00000304990 VCAM1P19320 739 aa12.35□□□□□ -0.43
COL4A3-201ENST00000304990 ADORA2AP29274 412 aa12.35□□□□□ -0.43
COL4A3-201ENST00000304990 ARID4AP29374 1257 aaPredicted RBP12.35□□□□□ -0.43
COL4A3-201ENST00000304990 PLA2G5P39877 138 aa12.35□□□□□ -0.43
COL4A3-201ENST00000304990 USP5P45974 858 aa12.35□□□□□ -0.43
COL4A3-201ENST00000304990 SNX17Q15036 470 aa12.35□□□□□ -0.43
COL4A3-201ENST00000304990 LRRC41Q15345 812 aa12.35□□□□□ -0.43
COL4A3-201ENST00000304990 TTC39AQ5SRH9 613 aa12.35□□□□□ -0.43
COL4A3-201ENST00000304990 CCDC129Q6ZRS4 1044 aa12.35□□□□□ -0.43
COL4A3-201ENST00000304990 ATXN2LQ8WWM7 1075 aaKnown RBP12.35□□□□□ -0.43
COL4A3-201ENST00000304990 C12orf42Q96LP6 360 aa12.35□□□□□ -0.43
COL4A3-201ENST00000304990 RPAP3Q9H6T3 665 aaPredicted RBP12.35□□□□□ -0.43
COL4A3-201ENST00000304990 SNRKQ9NRH2 765 aa12.35□□□□□ -0.43
COL4A3-201ENST00000304990 THEGQ9P2T0 379 aa12.35□□□□□ -0.43
COL4A3-201ENST00000304990 SPDYE16A6NNV3 312 aaPredicted RBP12.34□□□□□ -0.43
COL4A3-201ENST00000304990 CCER2I3L3R5 266 aa12.34□□□□□ -0.43
COL4A3-201ENST00000304990 KCNA4P22459 653 aa12.34□□□□□ -0.43
COL4A3-201ENST00000304990 MCAMP43121 646 aa12.34□□□□□ -0.43
COL4A3-201ENST00000304990 PLS1Q14651 629 aa12.34□□□□□ -0.43
COL4A3-201ENST00000304990 ABCB5Q2M3G0 1257 aa12.34□□□□□ -0.43
COL4A3-201ENST00000304990 ALDH1L2Q3SY69 923 aa12.34□□□□□ -0.43
COL4A3-201ENST00000304990 PRAMEF19Q5SWL8 479 aa12.34□□□□□ -0.43
COL4A3-201ENST00000304990 ADAMTS19Q8TE59 1207 aa12.34□□□□□ -0.43
COL4A3-201ENST00000304990 TIFAQ96CG3 184 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms