RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 SPDYE16A6NNV3 312 aaPredicted RBP8.25□□□□□ -1.09
TSC1-201ENST00000298552 SCG2P13521 617 aa8.25□□□□□ -1.09
TSC1-201ENST00000298552 IDEP14735 1019 aa8.25□□□□□ -1.09
TSC1-201ENST00000298552 SPDYE2Q495Y8 402 aa8.25□□□□□ -1.09
TSC1-201ENST00000298552 TRIM37O94972 964 aa8.25□□□□□ -1.09
TSC1-201ENST00000298552 RLBP1P12271 317 aa8.25□□□□□ -1.09
TSC1-201ENST00000298552 KANK4Q5T7N3 995 aaPredicted RBP8.25□□□□□ -1.09
TSC1-201ENST00000298552 KRBA2Q6ZNG9 492 aa8.25□□□□□ -1.09
TSC1-201ENST00000298552 KLHL31Q9H511 634 aa8.25□□□□□ -1.09
TSC1-201ENST00000298552 HMG20BQ9P0W2 317 aa8.25□□□□□ -1.09
TSC1-201ENST00000298552 ABCD1P33897 745 aa8.25□□□□□ -1.09
TSC1-201ENST00000298552 GNG11P61952 73 aa8.25□□□□□ -1.09
TSC1-201ENST00000298552 IGBP1P78318 339 aa8.25□□□□□ -1.09
TSC1-201ENST00000298552 KRT76Q01546 638 aa8.25□□□□□ -1.09
TSC1-201ENST00000298552 PNMA8AQ86V59 439 aaPredicted RBP8.25□□□□□ -1.09
TSC1-201ENST00000298552 MID2Q9UJV3 735 aa8.25□□□□□ -1.09
TSC1-201ENST00000298552 UAP1Q16222 522 aaPredicted RBP8.24□□□□□ -1.09
TSC1-201ENST00000298552 GJC2Q5T442 439 aaPredicted RBP8.24□□□□□ -1.09
TSC1-201ENST00000298552 NBPF3Q9H094 633 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 DYNC1LI2O43237 492 aaPredicted RBP8.24□□□□□ -1.09
TSC1-201ENST00000298552 ST5P78524 1137 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 ESRP1Q6NXG1 681 aaKnown RBP8.24□□□□□ -1.09
TSC1-201ENST00000298552 TRIM11Q96F44 468 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 RBM42Q9BTD8 480 aaKnown RBP8.24□□□□□ -1.09
TSC1-201ENST00000298552 NFU1Q9UMS0 254 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 ZNF233A6NK53 670 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 DNM2P50570 870 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 KCNG4Q8TDN1 519 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 RBM10P98175 930 aaKnown RBP8.24□□□□□ -1.09
TSC1-201ENST00000298552 ADALQ6DHV7 355 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 SMAP1Q8IYB5 467 aaPredicted RBP8.24□□□□□ -1.09
TSC1-201ENST00000298552 ACRBPQ8NEB7 543 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 UBLCP1Q8WVY7 318 aaPredicted RBP8.24□□□□□ -1.09
TSC1-201ENST00000298552 GSTA4O15217 222 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 SRGAP3O43295 1099 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 HSPA1AP0DMV8 641 aaKnown RBP8.24□□□□□ -1.09
TSC1-201ENST00000298552 HSPA1BP0DMV9 641 aaKnown RBP8.24□□□□□ -1.09
TSC1-201ENST00000298552 UPF3AQ9H1J1 476 aaKnown RBP8.24□□□□□ -1.09
TSC1-201ENST00000298552 AIPL1Q9NZN9 384 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 TK2O00142 265 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 GLRX3O76003 335 aaKnown RBP8.24□□□□□ -1.09
TSC1-201ENST00000298552 DRP2Q13474 957 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 CASC4Q6P4E1 433 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 MRPS27Q92552 414 aaKnown RBP8.24□□□□□ -1.09
TSC1-201ENST00000298552 ZFP42Q96MM3 310 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 MED4Q9NPJ6 270 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 TRPC6Q9Y210 931 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 CHEK2O96017 543 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 INPP5BP32019 993 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 KRT2P35908 639 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 STRN3Q13033 797 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 RPAP2Q8IXW5 612 aaPredicted RBP8.24□□□□□ -1.09
TSC1-201ENST00000298552 PARD3BQ8TEW8 1205 aa8.24□□□□□ -1.09
TSC1-201ENST00000298552 CRNKL1Q9BZJ0 848 aaKnown RBP8.24□□□□□ -1.09
TSC1-201ENST00000298552 CCDC151A5D8V7 595 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 MAP3K13O43283 966 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 POTEIP0CG38 1075 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 GNA11P29992 359 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 TRMT44Q8IYL2 757 aaKnown RBP8.23□□□□□ -1.09
TSC1-201ENST00000298552 CEP70Q8NHQ1 597 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 FHOD3Q2V2M9 1422 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.23□□□□□ -1.09
TSC1-201ENST00000298552 KRT40Q6A162 431 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 EFHBQ8N7U6 833 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 ZNF280CQ8ND82 737 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 EFHD2Q96C19 240 aaPredicted RBP8.23□□□□□ -1.09
TSC1-201ENST00000298552 HOMER3Q9NSC5 361 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 PACSIN2Q9UNF0 486 aaPredicted RBP8.23□□□□□ -1.09
TSC1-201ENST00000298552 NVLO15381 856 aaKnown RBP8.23□□□□□ -1.09
TSC1-201ENST00000298552 PTPREP23469 700 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 NBPF8Q3BBV2 869 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 KLHL14Q9P2G3 628 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.23□□□□□ -1.09
TSC1-201ENST00000298552 ANKRD30BQ9BXX2 1392 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 ZNF213O14771 459 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 MAN1A1P33908 653 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 TYRO3Q06418 890 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 KARSQ15046 597 aaKnown RBP8.23□□□□□ -1.09
TSC1-201ENST00000298552 TEDDM1Q5T9Z0 273 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 ATG16L1Q676U5 607 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 RAB42Q8N4Z0 105 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 CNOT7Q9UIV1 285 aaKnown RBP8.23□□□□□ -1.09
TSC1-201ENST00000298552 LRRIQ3A6PVS8 624 aaPredicted RBP8.23□□□□□ -1.09
TSC1-201ENST00000298552 ZEB2O60315 1214 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 GHRP10912 638 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 BCRP11274 1271 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 CASP14P31944 242 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 BFSP1Q12934 665 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 KRT33BQ14525 404 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 FGD4Q96M96 766 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 H0YCG3 227 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 IDH1O75874 414 aaKnown RBP8.23□□□□□ -1.09
TSC1-201ENST00000298552 NLRP6P59044 892 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 TP53BP2Q13625 1128 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 GRAMD4Q6IC98 578 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 SKA2Q8WVK7 121 aaPredicted RBP8.23□□□□□ -1.09
TSC1-201ENST00000298552 GEMIN8Q9NWZ8 242 aaKnown RBP8.23□□□□□ -1.09
TSC1-201ENST00000298552 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.23□□□□□ -1.09
TSC1-201ENST00000298552 ZNF568Q3ZCX4 644 aa8.23□□□□□ -1.09
TSC1-201ENST00000298552 METTL24Q5JXM2 366 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms