RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 SENP2Q9HC62 589 aa15.25■□□□□ 0.03
RPUSD4-201ENST00000298317 TAOK2Q9UL54 1235 aa15.25■□□□□ 0.03
RPUSD4-201ENST00000298317 REXO2Q9Y3B8 237 aaKnown RBP15.25■□□□□ 0.03
RPUSD4-201ENST00000298317 SRPRBQ9Y5M8 271 aaKnown RBP15.25■□□□□ 0.03
RPUSD4-201ENST00000298317 LAMB4A4D0S4 1761 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 UBE2Q2LH0YL09 131 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 GPAA1O43292 621 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 MMP1P03956 469 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 HSP90AB3PQ58FF7 597 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 RILPL1Q5EBL4 403 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 KLHL10Q6JEL2 608 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 TBC1D10CQ8IV04 446 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 SLF1Q9BQI6 1058 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 SELENOOQ9BVL4 669 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 GRIN2DO15399 1336 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 GOLGA6CA6NDK9 693 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 BTBD18B2RXH4 712 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 H7C1W4 665 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 RNF225M0QZC1 329 aaPredicted RBP15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 ZBTB43O43298 467 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 GOLGA6DP0CG33 693 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 PPFIA1Q13136 1202 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 TRIM14Q14142 442 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 PAPD7Q5XG87 772 aaKnown RBP15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 POTEDQ86YR6 584 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 CRACR2AQ9BSW2 395 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 GOLGA6AQ9NYA3 693 aa15.24■□□□□ 0.03
RPUSD4-201ENST00000298317 CIAO1O76071 339 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 USP49Q70CQ1 688 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 SH3RF1Q7Z6J0 888 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 EID1Q9Y6B2 187 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 SCN11AQ9UI33 1791 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 LRRC10BA6NIK2 292 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 GOLGA8AA7E2F4 631 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 PPP1R3GB7ZBB8 358 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 EIF3HO15372 352 aaKnown RBP eCLIP15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 FMNL1O95466 1100 aaPredicted RBP15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 MYBL2P10244 700 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 USP8P40818 1118 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 PIP4K2AP48426 406 aaPredicted RBP15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 SKIDA1Q1XH10 827 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 SGMS1Q86VZ5 419 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 DIS3L2Q8IYB7 885 aaKnown RBP15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 ZNF496Q96IT1 587 aaPredicted RBP15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 TMEM87BQ96K49 555 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 SLC52A2Q9HAB3 445 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 HDAC6Q9UBN7 1215 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 TRIM10Q9UDY6 481 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 LIMA1Q9UHB6 759 aaKnown RBP15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 SAR1BQ9Y6B6 198 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 ARHGAP23Q9P227 1491 aa15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 ATXN2Q99700 1313 aaKnown RBP15.23■□□□□ 0.03
RPUSD4-201ENST00000298317 ATP1A1P05023 1023 aaKnown RBP15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 CKAP4Q07065 602 aaKnown RBP15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 CCNI2Q6ZMN8 369 aaPredicted RBP15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 GBP6Q6ZN66 633 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 SLC26A6Q9BXS9 759 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 CSRNP2Q9H175 543 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 FOXP1Q9H334 677 aaPredicted RBP15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 HAUS4Q9H6D7 363 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 PCDHB6Q9Y5E3 794 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 TJP1Q07157 1748 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 ENC1O14682 589 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 NDUFA10O95299 355 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 CDC25AP30304 524 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 TDO2P48775 406 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 SSRP1Q08945 709 aaKnown RBP15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 KRT31Q15323 416 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 NBPF20Q3BBV1 942 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 FBXW10Q5XX13 1052 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 ANKRD20A12PQ8NF67 263 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 PLBD2Q8NHP8 589 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 IGDCC4Q8TDY8 1250 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 WASF1Q92558 559 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 CAPS2Q9BXY5 557 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 LY9Q9HBG7 655 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 STRN4Q9NRL3 753 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 GUCA1BQ9UMX6 200 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 PHF8Q9UPP1 1060 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 MYH7P12883 1935 aa15.22■□□□□ 0.03
RPUSD4-201ENST00000298317 A0A087X0B3 334 aa15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 GOLGA6BA6NDN3 693 aa15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 CCT6AP40227 531 aaKnown RBP15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 SAFBQ15424 915 aaKnown RBP eCLIP15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 GSPT2Q8IYD1 628 aaKnown RBP15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 BCAS4Q8TDM0 211 aa15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 GDAP1L1Q96MZ0 367 aa15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 NUP88Q99567 741 aaPredicted RBP15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 EPN1Q9Y6I3 576 aaPredicted RBP15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 NID2Q14112 1375 aa15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 ABCC12Q96J65 1359 aa15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 KIF1AQ12756 1690 aa15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 MAP2K2P36507 400 aa15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 MNAT1P51948 309 aa15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 DPYDQ12882 1025 aa15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 PRPF38AQ8NAV1 312 aaKnown RBP15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 AENQ8WTP8 325 aaKnown RBP15.21■□□□□ 0.03
RPUSD4-201ENST00000298317 PAGE5Q96GU1 130 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms