RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 SPAG1Q07617 926 aa17.19■□□□□ 0.34
FNDC1-201ENST00000297267 METTL13Q8N6R0 699 aa17.19■□□□□ 0.34
FNDC1-201ENST00000297267 EIF2AK4Q9P2K8 1649 aaKnown RBP17.19■□□□□ 0.34
FNDC1-201ENST00000297267 UHRF1BP1LA0JNW5 1464 aa17.18■□□□□ 0.34
FNDC1-201ENST00000297267 CERS3Q8IU89 383 aa17.18■□□□□ 0.34
FNDC1-201ENST00000297267 ANKRD13CQ8N6S4 541 aa17.18■□□□□ 0.34
FNDC1-201ENST00000297267 NAP1L3Q99457 506 aaPredicted RBP17.18■□□□□ 0.34
FNDC1-201ENST00000297267 BMP15O95972 392 aa17.18■□□□□ 0.34
FNDC1-201ENST00000297267 TNNC1P63316 161 aa17.18■□□□□ 0.34
FNDC1-201ENST00000297267 GTF2IP78347 998 aa17.18■□□□□ 0.34
FNDC1-201ENST00000297267 SMC1BQ8NDV3 1235 aa17.18■□□□□ 0.34
FNDC1-201ENST00000297267 PFDN4Q9NQP4 134 aa17.18■□□□□ 0.34
FNDC1-201ENST00000297267 PLVAPQ9BX97 442 aa17.18■□□□□ 0.34
FNDC1-201ENST00000297267 CALUO43852 315 aaPredicted RBP17.18■□□□□ 0.34
FNDC1-201ENST00000297267 CALCOCO2Q13137 446 aa17.18■□□□□ 0.34
FNDC1-201ENST00000297267 INF2Q27J81 1249 aa17.18■□□□□ 0.34
FNDC1-201ENST00000297267 NSMFQ6X4W1 530 aa17.18■□□□□ 0.34
FNDC1-201ENST00000297267 TXNDC9O14530 226 aa17.18■□□□□ 0.34
FNDC1-201ENST00000297267 NKX1-1Q15270 411 aaPredicted RBP17.18■□□□□ 0.34
FNDC1-201ENST00000297267 PDE8AO60658 829 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 EAPPQ56P03 285 aaPredicted RBP17.17■□□□□ 0.34
FNDC1-201ENST00000297267 TRIM68Q6AZZ1 485 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 CCDC77Q9BR77 488 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 ARHGEF35A5YM69 484 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 CNNM4Q6P4Q7 775 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 SPICE1Q8N0Z3 855 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 INTS4Q96HW7 963 aaKnown RBP17.17■□□□□ 0.34
FNDC1-201ENST00000297267 USP28Q96RU2 1077 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 GGA1Q9UJY5 639 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 CEP83Q9Y592 693 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.17■□□□□ 0.34
FNDC1-201ENST00000297267 CXCR5P32302 372 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 NDUFAB1O14561 156 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 ABL1P00519 1130 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 SCRN1Q12765 414 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 TRPC3Q13507 836 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 ZNF496Q96IT1 587 aaPredicted RBP17.17■□□□□ 0.34
FNDC1-201ENST00000297267 PAGR1Q9BTK6 254 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 MYCP01106 439 aaPredicted RBP17.17■□□□□ 0.34
FNDC1-201ENST00000297267 ARID4AP29374 1257 aaPredicted RBP17.17■□□□□ 0.34
FNDC1-201ENST00000297267 PPARAQ07869 468 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 GCKRQ14397 625 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 LRWD1Q9UFC0 647 aa17.17■□□□□ 0.34
FNDC1-201ENST00000297267 SESN3P58005 492 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 KCTD16Q68DU8 428 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 RNF169Q8NCN4 708 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 HAUS7Q99871 368 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 APPBP2Q92624 585 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 EPSTI1Q96J88 318 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 MTRF1LQ9UGC7 380 aaKnown RBP17.16■□□□□ 0.34
FNDC1-201ENST00000297267 TESPA1A2RU30 521 aaPredicted RBP17.16■□□□□ 0.34
FNDC1-201ENST00000297267 NEURL1BA8MQ27 555 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 CDC25AP30304 524 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 ADCY7P51828 1080 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 PRR16Q569H4 304 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 CCDC105Q8IYK2 499 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 DCLK2Q8N568 766 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 MPHOSPH6Q99547 160 aaKnown RBP17.16■□□□□ 0.34
FNDC1-201ENST00000297267 SMCO2A6NFE2 343 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 IGBP1P78318 339 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 PI16Q6UXB8 463 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 LONRF2Q1L5Z9 754 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 SCYL2Q6P3W7 929 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 ZNF589Q86UQ0 364 aaPredicted RBP17.16■□□□□ 0.34
FNDC1-201ENST00000297267 CCDC110Q8TBZ0 833 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 ERO1AQ96HE7 468 aa17.16■□□□□ 0.34
FNDC1-201ENST00000297267 SREK1Q8WXA9 508 aaKnown RBP17.15■□□□□ 0.34
FNDC1-201ENST00000297267 JDP2Q8WYK2 163 aa17.15■□□□□ 0.34
FNDC1-201ENST00000297267 RTEL1Q9NZ71 1219 aa17.15■□□□□ 0.34
FNDC1-201ENST00000297267 CAVIN2O95810 425 aa17.15■□□□□ 0.34
FNDC1-201ENST00000297267 STRN3Q13033 797 aa17.15■□□□□ 0.34
FNDC1-201ENST00000297267 PNMA8AQ86V59 439 aaPredicted RBP17.15■□□□□ 0.34
FNDC1-201ENST00000297267 PICK1Q9NRD5 415 aa17.15■□□□□ 0.34
FNDC1-201ENST00000297267 ABCC10Q5T3U5 1492 aa17.15■□□□□ 0.34
FNDC1-201ENST00000297267 LRRC41Q15345 812 aa17.15■□□□□ 0.34
FNDC1-201ENST00000297267 GOLGA6BA6NDN3 693 aa17.15■□□□□ 0.34
FNDC1-201ENST00000297267 KCNK3O14649 394 aa17.15■□□□□ 0.34
FNDC1-201ENST00000297267 ATP2A1O14983 1001 aa17.15■□□□□ 0.34
FNDC1-201ENST00000297267 SLC1A4P43007 532 aa17.15■□□□□ 0.34
FNDC1-201ENST00000297267 DYNLL1P63167 89 aaKnown RBP17.15■□□□□ 0.34
FNDC1-201ENST00000297267 MORC3Q14149 939 aa17.15■□□□□ 0.34
FNDC1-201ENST00000297267 CCDC170Q8IYT3 715 aa17.15■□□□□ 0.34
FNDC1-201ENST00000297267 VPS37BQ9H9H4 285 aa17.15■□□□□ 0.34
FNDC1-201ENST00000297267 FANCLQ9NW38 375 aa17.15■□□□□ 0.34
FNDC1-201ENST00000297267 KCNJ18B7U540 433 aa17.14■□□□□ 0.34
FNDC1-201ENST00000297267 USP17L12C9JPN9 530 aa17.14■□□□□ 0.34
FNDC1-201ENST00000297267 USP17L21D6R901 530 aa17.14■□□□□ 0.34
FNDC1-201ENST00000297267 NOP56O00567 594 aaKnown RBP17.14■□□□□ 0.34
FNDC1-201ENST00000297267 KCNJ12Q14500 433 aa17.14■□□□□ 0.34
FNDC1-201ENST00000297267 CCDC26Q8TAB7 109 aa17.14■□□□□ 0.34
FNDC1-201ENST00000297267 NOX5Q96PH1 765 aa17.14■□□□□ 0.34
FNDC1-201ENST00000297267 ST7Q9NRC1 585 aa17.14■□□□□ 0.34
FNDC1-201ENST00000297267 EXOC3O60645 756 aa17.14■□□□□ 0.33
FNDC1-201ENST00000297267 KLHL30Q0D2K2 578 aa17.14■□□□□ 0.33
FNDC1-201ENST00000297267 ANKRD2Q9GZV1 360 aa17.14■□□□□ 0.33
FNDC1-201ENST00000297267 FAM204AQ9H8W3 233 aa17.14■□□□□ 0.33
FNDC1-201ENST00000297267 MKRN3Q13064 507 aaKnown RBP17.14■□□□□ 0.33
FNDC1-201ENST00000297267 USP40Q9NVE5 1235 aa17.14■□□□□ 0.33
FNDC1-201ENST00000297267 MTUS1Q9ULD2 1270 aa17.14■□□□□ 0.33
FNDC1-201ENST00000297267 CUTAO60888 179 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms