RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 SHTN1A0MZ66 631 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 ENC1O14682 589 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 ZEB2O60315 1214 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 FOXO4P98177 505 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 IFFO1Q0D2I5 559 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 PARP10Q53GL7 1025 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 PODXL2Q9NZ53 605 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
TGFA-201ENST00000295400 RPS8P62241 208 aaKnown RBP13.04□□□□□ -0.32
TGFA-201ENST00000295400 KRT83P78385 493 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 FBXO38Q6PIJ6 1188 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 NELFCDQ8IXH7 590 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 SAMM50Q9Y512 469 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 UFL1O94874 794 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 PARP1P09874 1014 aaKnown RBP13.04□□□□□ -0.32
TGFA-201ENST00000295400 SF3A3Q12874 501 aaKnown RBP eCLIP13.04□□□□□ -0.32
TGFA-201ENST00000295400 FMR1NBQ8N0W7 255 aaPredicted RBP13.04□□□□□ -0.32
TGFA-201ENST00000295400 NLRC4Q9NPP4 1024 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 BIN2Q9UBW5 565 aaPredicted RBP13.04□□□□□ -0.32
TGFA-201ENST00000295400 ZNF609O15014 1411 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 PDIA6Q15084 440 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 OXER1Q8TDS5 423 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 MAN1B1Q9UKM7 699 aa13.04□□□□□ -0.32
TGFA-201ENST00000295400 SOS2Q07890 1332 aaPredicted RBP13.03□□□□□ -0.32
TGFA-201ENST00000295400 PIK3C2BO00750 1634 aa13.03□□□□□ -0.32
TGFA-201ENST00000295400 SOWAHDA6NJG2 315 aa13.03□□□□□ -0.32
TGFA-201ENST00000295400 PPP1R12BO60237 982 aaPredicted RBP13.03□□□□□ -0.32
TGFA-201ENST00000295400 TUBB4AP04350 444 aa13.03□□□□□ -0.32
TGFA-201ENST00000295400 SENP2Q9HC62 589 aa13.03□□□□□ -0.32
TGFA-201ENST00000295400 NEDD4P46934 1319 aa13.03□□□□□ -0.32
TGFA-201ENST00000295400 SALL3Q9BXA9 1300 aa13.03□□□□□ -0.32
TGFA-201ENST00000295400 ZMYND10O75800 440 aa13.03□□□□□ -0.32
TGFA-201ENST00000295400 GSTO1P78417 241 aa13.03□□□□□ -0.32
TGFA-201ENST00000295400 NRKQ7Z2Y5 1582 aa13.03□□□□□ -0.32
TGFA-201ENST00000295400 STRBPQ96SI9 672 aaKnown RBP13.03□□□□□ -0.32
TGFA-201ENST00000295400 UBE2Q2LH0YL09 131 aa13.03□□□□□ -0.32
TGFA-201ENST00000295400 CYP26C1Q6V0L0 522 aa13.03□□□□□ -0.32
TGFA-201ENST00000295400 VPS36Q86VN1 386 aa13.03□□□□□ -0.32
TGFA-201ENST00000295400 SPTLC3Q9NUV7 552 aa13.03□□□□□ -0.32
TGFA-201ENST00000295400 PKD2L1Q9P0L9 805 aa13.03□□□□□ -0.32
TGFA-201ENST00000295400 MED23Q9ULK4 1368 aa13.03□□□□□ -0.32
TGFA-201ENST00000295400 GNA11P29992 359 aa13.02□□□□□ -0.32
TGFA-201ENST00000295400 CRKLP46109 303 aaKnown RBP13.02□□□□□ -0.32
TGFA-201ENST00000295400 RAPGEF1Q13905 1077 aa13.02□□□□□ -0.32
TGFA-201ENST00000295400 SMC1AQ14683 1233 aaKnown RBP13.02□□□□□ -0.32
TGFA-201ENST00000295400 DCAF17Q5H9S7 520 aaPredicted RBP13.02□□□□□ -0.32
TGFA-201ENST00000295400 ZNF804AQ7Z570 1209 aa13.02□□□□□ -0.32
TGFA-201ENST00000295400 PLA2G4DQ86XP0 818 aa13.02□□□□□ -0.32
TGFA-201ENST00000295400 SYCP3Q8IZU3 236 aa13.02□□□□□ -0.32
TGFA-201ENST00000295400 MYO6Q9UM54 1294 aa13.02□□□□□ -0.32
TGFA-201ENST00000295400 MROH2AA6NES4 1674 aa13.02□□□□□ -0.32
TGFA-201ENST00000295400 PLEKHA8P1O95397 391 aa13.02□□□□□ -0.32
TGFA-201ENST00000295400 HLA-DOAP06340 250 aa13.02□□□□□ -0.32
TGFA-201ENST00000295400 RDXP35241 583 aaKnown RBP13.02□□□□□ -0.32
TGFA-201ENST00000295400 TECP42680 631 aa13.02□□□□□ -0.32
TGFA-201ENST00000295400 SUSD4Q5VX71 490 aa13.02□□□□□ -0.32
TGFA-201ENST00000295400 SLF2Q8IX21 1173 aa13.02□□□□□ -0.32
TGFA-201ENST00000295400 EHBP1Q8NDI1 1231 aa13.02□□□□□ -0.32
TGFA-201ENST00000295400 CTNNBL1Q8WYA6 563 aaPredicted RBP13.02□□□□□ -0.32
TGFA-201ENST00000295400 ZC3H12CQ9C0D7 883 aaKnown RBP13.02□□□□□ -0.32
TGFA-201ENST00000295400 CPVLQ9H3G5 476 aa13.02□□□□□ -0.32
TGFA-201ENST00000295400 MCM3P25205 808 aa13.02□□□□□ -0.33
TGFA-201ENST00000295400 GUCY1A2P33402 732 aa13.02□□□□□ -0.33
TGFA-201ENST00000295400 RBL2Q08999 1139 aa13.02□□□□□ -0.33
TGFA-201ENST00000295400 TYW1BQ6NUM6 668 aa13.02□□□□□ -0.33
TGFA-201ENST00000295400 SV2BQ7L1I2 683 aa13.02□□□□□ -0.33
TGFA-201ENST00000295400 PNMA1Q8ND90 353 aa13.02□□□□□ -0.33
TGFA-201ENST00000295400 ACRBPQ8NEB7 543 aa13.02□□□□□ -0.33
TGFA-201ENST00000295400 DPF2Q92785 391 aa13.02□□□□□ -0.33
TGFA-201ENST00000295400 WDR17Q8IZU2 1322 aa13.02□□□□□ -0.33
TGFA-201ENST00000295400 KCNJ18B7U540 433 aa13.02□□□□□ -0.33
TGFA-201ENST00000295400 GYS2P54840 703 aa13.02□□□□□ -0.33
TGFA-201ENST00000295400 KCNJ12Q14500 433 aa13.02□□□□□ -0.33
TGFA-201ENST00000295400 FCHSD1Q86WN1 690 aa13.02□□□□□ -0.33
TGFA-201ENST00000295400 JAKMIP2Q96AA8 810 aa13.02□□□□□ -0.33
TGFA-201ENST00000295400 CEP170BQ9Y4F5 1589 aaPredicted RBP13.01□□□□□ -0.33
TGFA-201ENST00000295400 LOC102724428A0A0B4J2F2 783 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 CTDNEP1O95476 244 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 SIK1P57059 783 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 CKAP4Q07065 602 aaKnown RBP13.01□□□□□ -0.33
TGFA-201ENST00000295400 TCP10Q12799 353 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 MORC3Q14149 939 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 HDXQ7Z353 690 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 FERMT2Q96AC1 680 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 TMOD2Q9NZR1 351 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 TBCAO75347 108 aaKnown RBP13.01□□□□□ -0.33
TGFA-201ENST00000295400 SMARCC2Q8TAQ2 1214 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 GPR101Q96P66 508 aaPredicted RBP13.01□□□□□ -0.33
TGFA-201ENST00000295400 LRWD1Q9UFC0 647 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 FRMPD2Q68DX3 1309 aaPredicted RBP13.01□□□□□ -0.33
TGFA-201ENST00000295400 SMIM23A6NLE4 172 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 NMT2O60551 498 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 MMP1P03956 469 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 NEFHP12036 1026 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 TMTC1Q8IUR5 882 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 DHX40Q8IX18 779 aaKnown RBP13.01□□□□□ -0.33
TGFA-201ENST00000295400 ATRIPQ8WXE1 791 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 CUL5Q93034 780 aa13.01□□□□□ -0.33
TGFA-201ENST00000295400 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.01□□□□□ -0.33
TGFA-201ENST00000295400 CCNL1Q9UK58 526 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms