RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 VEGFAP15692 232 aaPredicted RBP24.81■■□□□ 1.56
PAXBP1-201ENST00000290178 AFMP43652 599 aa24.81■■□□□ 1.56
PAXBP1-201ENST00000290178 SYCP1Q15431 976 aa24.81■■□□□ 1.56
PAXBP1-201ENST00000290178 ZNF174Q15697 407 aa24.81■■□□□ 1.56
PAXBP1-201ENST00000290178 NT5DC1Q5TFE4 455 aa24.81■■□□□ 1.56
PAXBP1-201ENST00000290178 RPS8P62241 208 aaKnown RBP24.81■■□□□ 1.56
PAXBP1-201ENST00000290178 ELOA2Q8IYF1 753 aaPredicted RBP24.81■■□□□ 1.56
PAXBP1-201ENST00000290178 MYH6P13533 1939 aa24.81■■□□□ 1.56
PAXBP1-201ENST00000290178 XBP1P17861 261 aa24.8■■□□□ 1.56
PAXBP1-201ENST00000290178 TXNRD3Q86VQ6 643 aa24.8■■□□□ 1.56
PAXBP1-201ENST00000290178 SAMSN1Q9NSI8 373 aaKnown RBP24.8■■□□□ 1.56
PAXBP1-201ENST00000290178 BAZ2BQ9UIF8 2168 aaKnown RBP24.8■■□□□ 1.56
PAXBP1-201ENST00000290178 ADAMTS3O15072 1205 aa24.8■■□□□ 1.56
PAXBP1-201ENST00000290178 NPHP1O15259 732 aa24.8■■□□□ 1.56
PAXBP1-201ENST00000290178 CDK11BP21127 795 aaKnown RBP24.8■■□□□ 1.56
PAXBP1-201ENST00000290178 SRBD1Q8N5C6 995 aaKnown RBP24.8■■□□□ 1.56
PAXBP1-201ENST00000290178 DCP1AQ9NPI6 582 aaPredicted RBP24.8■■□□□ 1.56
PAXBP1-201ENST00000290178 NRDCO43847 1150 aa24.79■■□□□ 1.56
PAXBP1-201ENST00000290178 FGRP09769 529 aa24.79■■□□□ 1.56
PAXBP1-201ENST00000290178 PPP2R5BQ15173 497 aa24.79■■□□□ 1.56
PAXBP1-201ENST00000290178 NPY5RQ15761 445 aa24.79■■□□□ 1.56
PAXBP1-201ENST00000290178 BARGINQ6ZT62 677 aa24.79■■□□□ 1.56
PAXBP1-201ENST00000290178 A0A1B0GUL6 1792 aa24.78■■□□□ 1.56
PAXBP1-201ENST00000290178 TMTC3Q6ZXV5 915 aa24.78■■□□□ 1.56
PAXBP1-201ENST00000290178 LRRN4CLQ8ND94 238 aa24.78■■□□□ 1.56
PAXBP1-201ENST00000290178 SYMPKQ92797 1274 aaKnown RBP24.78■■□□□ 1.56
PAXBP1-201ENST00000290178 TMX1Q9H3N1 280 aa24.78■■□□□ 1.56
PAXBP1-201ENST00000290178 HIBADHP31937 336 aaKnown RBP24.78■■□□□ 1.56
PAXBP1-201ENST00000290178 HOMER1Q86YM7 354 aa24.78■■□□□ 1.56
PAXBP1-201ENST00000290178 MLKLQ8NB16 471 aa24.78■■□□□ 1.56
PAXBP1-201ENST00000290178 ZNF18P17022 549 aa24.77■■□□□ 1.56
PAXBP1-201ENST00000290178 SLC10A5Q5PT55 438 aa24.77■■□□□ 1.56
PAXBP1-201ENST00000290178 STAMQ92783 540 aa24.77■■□□□ 1.56
PAXBP1-201ENST00000290178 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.77■■□□□ 1.56
PAXBP1-201ENST00000290178 NBPF5PQ86XG9 351 aaPredicted RBP24.77■■□□□ 1.56
PAXBP1-201ENST00000290178 NLRP3Q96P20 1036 aa24.77■■□□□ 1.56
PAXBP1-201ENST00000290178 RBM28Q9NW13 759 aaKnown RBP24.77■■□□□ 1.56
PAXBP1-201ENST00000290178 KCNJ6P48051 423 aa24.76■■□□□ 1.55
PAXBP1-201ENST00000290178 ELF2Q15723 593 aa24.76■■□□□ 1.55
PAXBP1-201ENST00000290178 ENOX1Q8TC92 643 aaKnown RBP24.76■■□□□ 1.55
PAXBP1-201ENST00000290178 COL5A3P25940 1745 aaPredicted RBP24.76■■□□□ 1.55
PAXBP1-201ENST00000290178 KIF2AO00139 706 aaPredicted RBP24.76■■□□□ 1.55
PAXBP1-201ENST00000290178 ADKP55263 362 aaKnown RBP24.76■■□□□ 1.55
PAXBP1-201ENST00000290178 KLHL10Q6JEL2 608 aa24.76■■□□□ 1.55
PAXBP1-201ENST00000290178 AMIGO3Q86WK7 504 aa24.76■■□□□ 1.55
PAXBP1-201ENST00000290178 TMEM139Q8IV31 216 aa24.76■■□□□ 1.55
PAXBP1-201ENST00000290178 TNFRSF25Q93038 417 aa24.76■■□□□ 1.55
PAXBP1-201ENST00000290178 SETDB2Q96T68 719 aa24.76■■□□□ 1.55
PAXBP1-201ENST00000290178 MYH13Q9UKX3 1938 aa24.76■■□□□ 1.55
PAXBP1-201ENST00000290178 CNTNAP5Q8WYK1 1306 aa24.76■■□□□ 1.55
PAXBP1-201ENST00000290178 SLU7O95391 586 aaKnown RBP24.75■■□□□ 1.55
PAXBP1-201ENST00000290178 STX17P56962 302 aa24.75■■□□□ 1.55
PAXBP1-201ENST00000290178 SMYD4Q8IYR2 804 aaPredicted RBP24.75■■□□□ 1.55
PAXBP1-201ENST00000290178 SPATA20Q8TB22 786 aa24.75■■□□□ 1.55
PAXBP1-201ENST00000290178 PAGE5Q96GU1 130 aa24.75■■□□□ 1.55
PAXBP1-201ENST00000290178 CASZ1Q86V15 1759 aa24.75■■□□□ 1.55
PAXBP1-201ENST00000290178 VWA3AA6NCI4 1184 aa24.75■■□□□ 1.55
PAXBP1-201ENST00000290178 CD44P16070 742 aaKnown RBP24.75■■□□□ 1.55
PAXBP1-201ENST00000290178 SCN7AQ01118 1682 aa24.75■■□□□ 1.55
PAXBP1-201ENST00000290178 CRNKL1Q9BZJ0 848 aaKnown RBP24.75■■□□□ 1.55
PAXBP1-201ENST00000290178 KANK3Q6NY19 840 aa24.74■■□□□ 1.55
PAXBP1-201ENST00000290178 DNAI1Q9UI46 699 aa24.74■■□□□ 1.55
PAXBP1-201ENST00000290178 FANCGO15287 622 aa24.74■■□□□ 1.55
PAXBP1-201ENST00000290178 USP17L8P0C7I0 530 aa24.74■■□□□ 1.55
PAXBP1-201ENST00000290178 CALM1P0DP23 149 aa24.74■■□□□ 1.55
PAXBP1-201ENST00000290178 CALM2P0DP24 149 aa24.74■■□□□ 1.55
PAXBP1-201ENST00000290178 CALM3P0DP25 149 aa24.74■■□□□ 1.55
PAXBP1-201ENST00000290178 PTGDRQ13258 359 aa24.74■■□□□ 1.55
PAXBP1-201ENST00000290178 DHX8Q14562 1220 aaKnown RBP24.74■■□□□ 1.55
PAXBP1-201ENST00000290178 FAM182BQ5T319 152 aa24.74■■□□□ 1.55
PAXBP1-201ENST00000290178 CTCFLQ8NI51 663 aaPredicted RBP24.74■■□□□ 1.55
PAXBP1-201ENST00000290178 ERO1AQ96HE7 468 aa24.74■■□□□ 1.55
PAXBP1-201ENST00000290178 CGNQ9P2M7 1197 aaKnown RBP24.74■■□□□ 1.55
PAXBP1-201ENST00000290178 COBLO75128 1261 aa24.73■■□□□ 1.55
PAXBP1-201ENST00000290178 DDAH1O94760 285 aa24.73■■□□□ 1.55
PAXBP1-201ENST00000290178 TBX2Q13207 712 aaPredicted RBP24.73■■□□□ 1.55
PAXBP1-201ENST00000290178 TTC38Q5R3I4 469 aa24.73■■□□□ 1.55
PAXBP1-201ENST00000290178 PIK3AP1Q6ZUJ8 805 aa24.73■■□□□ 1.55
PAXBP1-201ENST00000290178 REXO1L1PQ8IX06 675 aa24.73■■□□□ 1.55
PAXBP1-201ENST00000290178 DACH1Q9UI36 760 aa24.73■■□□□ 1.55
PAXBP1-201ENST00000290178 MYO1BO43795 1136 aa24.73■■□□□ 1.55
PAXBP1-201ENST00000290178 PLCD1P51178 756 aa24.73■■□□□ 1.55
PAXBP1-201ENST00000290178 PIP4K2BP78356 416 aa24.73■■□□□ 1.55
PAXBP1-201ENST00000290178 FAM177A1Q8N128 213 aaPredicted RBP24.73■■□□□ 1.55
PAXBP1-201ENST00000290178 TRIML1Q8N9V2 468 aa24.73■■□□□ 1.55
PAXBP1-201ENST00000290178 TSPY2A6NKD2 308 aa24.72■■□□□ 1.55
PAXBP1-201ENST00000290178 SLFN14P0C7P3 912 aa24.72■■□□□ 1.55
PAXBP1-201ENST00000290178 KMT5BQ4FZB7 885 aa24.72■■□□□ 1.55
PAXBP1-201ENST00000290178 TRIM65Q6PJ69 517 aa24.72■■□□□ 1.55
PAXBP1-201ENST00000290178 NARFQ9UHQ1 456 aa24.72■■□□□ 1.55
PAXBP1-201ENST00000290178 SEMA3EO15041 775 aa24.72■■□□□ 1.55
PAXBP1-201ENST00000290178 GNPATO15228 680 aa24.72■■□□□ 1.55
PAXBP1-201ENST00000290178 ORC4O43929 436 aa24.72■■□□□ 1.55
PAXBP1-201ENST00000290178 L2HGDHQ9H9P8 463 aa24.72■■□□□ 1.55
PAXBP1-201ENST00000290178 BRMS1Q9HCU9 246 aa24.72■■□□□ 1.55
PAXBP1-201ENST00000290178 MCM9Q9NXL9 1143 aa24.72■■□□□ 1.55
PAXBP1-201ENST00000290178 NLRP5P59047 1200 aa24.71■■□□□ 1.55
PAXBP1-201ENST00000290178 ETF1P62495 437 aaKnown RBP24.71■■□□□ 1.55
PAXBP1-201ENST00000290178 TC2NQ8N9U0 490 aa24.71■■□□□ 1.55
PAXBP1-201ENST00000290178 TEX33O43247 280 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms