RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 PDE4BQ07343 736 aa13.39□□□□□ -0.27
CHRNB3-201ENST00000289957 PRKG1Q13976 671 aa13.39□□□□□ -0.27
CHRNB3-201ENST00000289957 TMEM67Q5HYA8 995 aa13.39□□□□□ -0.27
CHRNB3-201ENST00000289957 RCSD1Q6JBY9 416 aa13.39□□□□□ -0.27
CHRNB3-201ENST00000289957 TTC6Q86TZ1 520 aa13.39□□□□□ -0.27
CHRNB3-201ENST00000289957 CCDC83Q8IWF9 413 aa13.39□□□□□ -0.27
CHRNB3-201ENST00000289957 CRACR2BQ8N4Y2 399 aaPredicted RBP13.39□□□□□ -0.27
CHRNB3-201ENST00000289957 ESR2Q92731 530 aa13.39□□□□□ -0.27
CHRNB3-201ENST00000289957 KRT23Q9C075 422 aa13.39□□□□□ -0.27
CHRNB3-201ENST00000289957 NMRK2Q9NPI5 230 aa13.39□□□□□ -0.27
CHRNB3-201ENST00000289957 MTMR7Q9Y216 660 aa13.39□□□□□ -0.27
CHRNB3-201ENST00000289957 MYH8P13535 1937 aa13.39□□□□□ -0.27
CHRNB3-201ENST00000289957 SEC23AQ15436 765 aa13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 AMOTL1Q8IY63 956 aa13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 AGXT2Q9BYV1 514 aa13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 RNF41Q9H4P4 317 aaPredicted RBP13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 TAF1DQ9H5J8 278 aaPredicted RBP13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 RRAGCQ9HB90 399 aa13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 PI4KBQ9UBF8 816 aa13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 HPS5Q9UPZ3 1129 aa13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 SSC5DA1L4H1 1573 aa13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 KLF18A0A0U1RQI7 1052 aa13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 UBE2Q2LH0YL09 131 aa13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 LETM1O95202 739 aaPredicted RBP13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 HLA-DOAP06340 250 aa13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 PDIA4P13667 645 aaKnown RBP13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 CMTR1Q8N1G2 835 aaKnown RBP13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 ZSCAN10Q96SZ4 725 aaPredicted RBP13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 CNNM2Q9H8M5 875 aa13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.38□□□□□ -0.27
CHRNB3-201ENST00000289957 MPHOSPH10O00566 681 aaKnown RBP13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 HMGB1P09429 215 aaKnown RBP13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 TSPY3P0CV98 308 aa13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 TSPY8P0CW00 308 aa13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 CSPP1Q1MSJ5 1256 aa13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 CEP95Q96GE4 821 aa13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 ANGEL1Q9UNK9 670 aaKnown RBP13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 LIMCH1Q9UPQ0 1083 aa13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 PDIA3P30101 505 aaKnown RBP13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 SCRN1Q12765 414 aa13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 FAM83AQ86UY5 434 aa13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 MICU3Q86XE3 530 aa13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 ZNF444Q8N0Y2 327 aaPredicted RBP13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 DHX36Q9H2U1 1008 aaKnown RBP13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHRNB3-201ENST00000289957 JAK2O60674 1132 aa13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 SLC3A2P08195 630 aaKnown RBP13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 ZSCAN22P10073 491 aaPredicted RBP13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 GUCY1A2P33402 732 aa13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 CCDC183Q5T5S1 534 aa13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 FKBP1CQ5VVH2 108 aa13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 ZSCAN31Q96LW9 406 aaPredicted RBP13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 UBAC1Q9BSL1 405 aa13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 GLIS2Q9BZE0 524 aaPredicted RBP13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 SH2B1Q9NRF2 756 aaPredicted RBP13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 TAOK2Q9UL54 1235 aa13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 STX8Q9UNK0 236 aa13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 ATP6V1DQ9Y5K8 247 aa13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 BAZ2BQ9UIF8 2168 aaKnown RBP13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 GOLGA8BA8MQT2 603 aa13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 CDC27P30260 824 aa13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 MAP1SQ66K74 1059 aaPredicted RBP13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 MOB2Q70IA6 237 aa13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 EHD4Q9H223 541 aa13.36□□□□□ -0.27
CHRNB3-201ENST00000289957 TRAF5O00463 557 aa13.35□□□□□ -0.27
CHRNB3-201ENST00000289957 CTDNEP1O95476 244 aa13.35□□□□□ -0.27
CHRNB3-201ENST00000289957 GH2P01242 217 aa13.35□□□□□ -0.27
CHRNB3-201ENST00000289957 WTAPQ15007 396 aa13.35□□□□□ -0.27
CHRNB3-201ENST00000289957 SEPT2Q15019 361 aa13.35□□□□□ -0.27
CHRNB3-201ENST00000289957 CERKLQ49MI3 558 aaPredicted RBP13.35□□□□□ -0.27
CHRNB3-201ENST00000289957 TATDN1Q6P1N9 297 aa13.35□□□□□ -0.27
CHRNB3-201ENST00000289957 APOA5Q6Q788 366 aa13.35□□□□□ -0.27
CHRNB3-201ENST00000289957 NFXL1Q6ZNB6 911 aa13.35□□□□□ -0.27
CHRNB3-201ENST00000289957 USP48Q86UV5 1035 aa13.35□□□□□ -0.27
CHRNB3-201ENST00000289957 METTL16Q86W50 562 aaKnown RBP13.35□□□□□ -0.27
CHRNB3-201ENST00000289957 SIAH1Q8IUQ4 282 aa13.35□□□□□ -0.27
CHRNB3-201ENST00000289957 LRRC47Q8N1G4 583 aaKnown RBP13.35□□□□□ -0.27
CHRNB3-201ENST00000289957 WDR90Q96KV7 1748 aa13.35□□□□□ -0.27
CHRNB3-201ENST00000289957 INPP5BP32019 993 aa13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 ADD1P35611 737 aaKnown RBP13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 DGKZQ13574 1117 aa13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 KRT26Q7Z3Y9 468 aa13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 CCDC82Q8N4S0 544 aa13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 ALDH8A1Q9H2A2 487 aaPredicted RBP13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 CPVLQ9H3G5 476 aa13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 FAM217BQ9NTX9 383 aaPredicted RBP13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 MYH15Q9Y2K3 1946 aa13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 PHF20L1A8MW92 1017 aa13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 UBE2HP62256 183 aa13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 ATP2B2Q01814 1243 aa13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 IFIT1BQ5T764 474 aaKnown RBP13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 NUP133Q8WUM0 1156 aa13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 ZKSCAN4Q969J2 545 aaPredicted RBP13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 ZC3H4Q9UPT8 1303 aaKnown RBP13.34□□□□□ -0.27
CHRNB3-201ENST00000289957 GREB1LQ9C091 1923 aaPredicted RBP13.33□□□□□ -0.27
CHRNB3-201ENST00000289957 F13A1P00488 732 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 IQCA1Q86XH1 822 aa13.33□□□□□ -0.28
CHRNB3-201ENST00000289957 NEDD1Q8NHV4 660 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms