RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 RAB3GAP1Q15042 981 aa25.64■■□□□ 1.69
PDLIM3-203ENST00000284771 CCDC84Q86UT8 332 aaPredicted RBP25.64■■□□□ 1.69
PDLIM3-203ENST00000284771 CABP5Q9NP86 173 aa25.64■■□□□ 1.69
PDLIM3-203ENST00000284771 OTOFQ9HC10 1997 aa25.63■■□□□ 1.69
PDLIM3-203ENST00000284771 TOMM70O94826 608 aa25.63■■□□□ 1.69
PDLIM3-203ENST00000284771 LIFRP42702 1097 aa25.63■■□□□ 1.69
PDLIM3-203ENST00000284771 DGKHQ86XP1 1220 aa25.63■■□□□ 1.69
PDLIM3-203ENST00000284771 ANKS1AQ92625 1134 aa25.63■■□□□ 1.69
PDLIM3-203ENST00000284771 BRPF3Q9ULD4 1205 aa25.63■■□□□ 1.69
PDLIM3-203ENST00000284771 ST18O60284 1047 aa25.62■■□□□ 1.69
PDLIM3-203ENST00000284771 CELF2O95319 508 aaKnown RBP25.62■■□□□ 1.69
PDLIM3-203ENST00000284771 APOBRQ0VD83 1088 aa25.62■■□□□ 1.69
PDLIM3-203ENST00000284771 SART3Q15020 963 aaKnown RBP25.62■■□□□ 1.69
PDLIM3-203ENST00000284771 NOL8Q76FK4 1167 aaKnown RBP25.62■■□□□ 1.69
PDLIM3-203ENST00000284771 PASKQ96RG2 1323 aa25.62■■□□□ 1.69
PDLIM3-203ENST00000284771 KANSL2Q9H9L4 492 aa25.62■■□□□ 1.69
PDLIM3-203ENST00000284771 STX8Q9UNK0 236 aa25.62■■□□□ 1.69
PDLIM3-203ENST00000284771 ASNSP08243 561 aa25.61■■□□□ 1.69
PDLIM3-203ENST00000284771 MAP3K9P80192 1104 aa25.61■■□□□ 1.69
PDLIM3-203ENST00000284771 FGD1P98174 961 aa25.61■■□□□ 1.69
PDLIM3-203ENST00000284771 WTAPQ15007 396 aa25.61■■□□□ 1.69
PDLIM3-203ENST00000284771 SGMS1Q86VZ5 419 aa25.61■■□□□ 1.69
PDLIM3-203ENST00000284771 SCYL3Q8IZE3 742 aa25.61■■□□□ 1.69
PDLIM3-203ENST00000284771 TPCN1Q9ULQ1 816 aa25.61■■□□□ 1.69
PDLIM3-203ENST00000284771 ERICH2A1L162 156 aa25.61■■□□□ 1.69
PDLIM3-203ENST00000284771 IREB2P48200 963 aaKnown RBP25.61■■□□□ 1.69
PDLIM3-203ENST00000284771 EVCP57679 992 aa25.61■■□□□ 1.69
PDLIM3-203ENST00000284771 VGLL4Q14135 290 aa25.61■■□□□ 1.69
PDLIM3-203ENST00000284771 TTLL12Q14166 644 aaPredicted RBP25.61■■□□□ 1.69
PDLIM3-203ENST00000284771 TMEM47Q9BQJ4 181 aa25.61■■□□□ 1.69
PDLIM3-203ENST00000284771 DOCK1Q14185 1865 aa25.61■■□□□ 1.69
PDLIM3-203ENST00000284771 A0A1W2PRG0 241 aa25.6■■□□□ 1.69
PDLIM3-203ENST00000284771 UBE2Q2LH0YL09 131 aa25.6■■□□□ 1.69
PDLIM3-203ENST00000284771 EEF2P13639 858 aaKnown RBP25.6■■□□□ 1.69
PDLIM3-203ENST00000284771 NOL9Q5SY16 702 aaKnown RBP25.6■■□□□ 1.69
PDLIM3-203ENST00000284771 IFIT1BQ5T764 474 aaKnown RBP25.6■■□□□ 1.69
PDLIM3-203ENST00000284771 SMC1BQ8NDV3 1235 aa25.6■■□□□ 1.69
PDLIM3-203ENST00000284771 CLMNQ96JQ2 1002 aa25.6■■□□□ 1.69
PDLIM3-203ENST00000284771 CLIP2Q9UDT6 1046 aa25.6■■□□□ 1.69
PDLIM3-203ENST00000284771 SNCAIPQ9Y6H5 919 aa25.6■■□□□ 1.69
PDLIM3-203ENST00000284771 TTLL1O95922 423 aa25.59■■□□□ 1.69
PDLIM3-203ENST00000284771 ICA1Q05084 483 aa25.59■■□□□ 1.69
PDLIM3-203ENST00000284771 LDLRAD1Q5T700 205 aa25.59■■□□□ 1.69
PDLIM3-203ENST00000284771 IL27Q8NEV9 243 aa25.59■■□□□ 1.69
PDLIM3-203ENST00000284771 RBM46Q8TBY0 533 aaKnown RBP25.59■■□□□ 1.69
PDLIM3-203ENST00000284771 SNX21Q969T3 373 aa25.59■■□□□ 1.69
PDLIM3-203ENST00000284771 GBA2Q9HCG7 927 aaPredicted RBP25.59■■□□□ 1.69
PDLIM3-203ENST00000284771 TRPM7Q96QT4 1865 aa25.59■■□□□ 1.69
PDLIM3-203ENST00000284771 LARGE1O95461 756 aa25.58■■□□□ 1.69
PDLIM3-203ENST00000284771 PTPRAP18433 802 aa25.58■■□□□ 1.69
PDLIM3-203ENST00000284771 CCDC178Q5BJE1 867 aa25.58■■□□□ 1.69
PDLIM3-203ENST00000284771 MKL1Q969V6 931 aa25.58■■□□□ 1.69
PDLIM3-203ENST00000284771 NYAP2Q9P242 653 aa25.58■■□□□ 1.69
PDLIM3-203ENST00000284771 MYH4Q9Y623 1939 aa25.58■■□□□ 1.69
PDLIM3-203ENST00000284771 ECE1P42892 770 aa25.58■■□□□ 1.68
PDLIM3-203ENST00000284771 ANKRD1Q15327 319 aa25.58■■□□□ 1.68
PDLIM3-203ENST00000284771 ARMC9Q7Z3E5 817 aa25.58■■□□□ 1.68
PDLIM3-203ENST00000284771 ANKRD13AQ8IZ07 590 aa25.58■■□□□ 1.68
PDLIM3-203ENST00000284771 TMTC2Q8N394 836 aa25.58■■□□□ 1.68
PDLIM3-203ENST00000284771 ACER1Q8TDN7 264 aa25.58■■□□□ 1.68
PDLIM3-203ENST00000284771 GINM1Q9NU53 330 aa25.58■■□□□ 1.68
PDLIM3-203ENST00000284771 ME3Q16798 604 aa25.57■■□□□ 1.68
PDLIM3-203ENST00000284771 MYL10Q9BUA6 226 aa25.57■■□□□ 1.68
PDLIM3-203ENST00000284771 TBC1D2Q9BYX2 928 aa25.57■■□□□ 1.68
PDLIM3-203ENST00000284771 PHIPQ8WWQ0 1821 aa25.56■■□□□ 1.68
PDLIM3-203ENST00000284771 KLF18A0A0U1RQI7 1052 aa25.56■■□□□ 1.68
PDLIM3-203ENST00000284771 ATP2B2Q01814 1243 aa25.56■■□□□ 1.68
PDLIM3-203ENST00000284771 APOA5Q6Q788 366 aa25.56■■□□□ 1.68
PDLIM3-203ENST00000284771 NFXL1Q6ZNB6 911 aa25.56■■□□□ 1.68
PDLIM3-203ENST00000284771 RAB11FIP4Q86YS3 637 aa25.56■■□□□ 1.68
PDLIM3-203ENST00000284771 LRRC47Q8N1G4 583 aaKnown RBP25.56■■□□□ 1.68
PDLIM3-203ENST00000284771 CNKSR2Q8WXI2 1034 aa25.56■■□□□ 1.68
PDLIM3-203ENST00000284771 LIMCH1Q9UPQ0 1083 aa25.56■■□□□ 1.68
PDLIM3-203ENST00000284771 USP17L5A8MUK1 530 aa25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 TOP1P11387 765 aaKnown RBP25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 PDIA3P30101 505 aaKnown RBP25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 FKBP1BP68106 108 aa25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 TROAPQ12815 778 aa25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 PNMA1Q8ND90 353 aa25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 HPS5Q9UPZ3 1129 aa25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 CCDC69A6NI79 296 aa25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 RXRAP19793 462 aa25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 RASGRP2Q7LDG7 609 aa25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 ZNF654Q8IZM8 581 aa25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 C2orf69Q8N8R5 385 aa25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 KAT14Q9H8E8 782 aa25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 PICK1Q9NRD5 415 aa25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 CSADQ9Y600 493 aa25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 SLC12A7Q9Y666 1083 aa25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 ZHX2Q9Y6X8 837 aa25.55■■□□□ 1.68
PDLIM3-203ENST00000284771 ZNF274Q96GC6 653 aaPredicted RBP25.54■■□□□ 1.68
PDLIM3-203ENST00000284771 TMX3Q96JJ7 454 aa25.54■■□□□ 1.68
PDLIM3-203ENST00000284771 ELP3Q9H9T3 547 aa25.54■■□□□ 1.68
PDLIM3-203ENST00000284771 MCM2P49736 904 aa25.53■■□□□ 1.68
PDLIM3-203ENST00000284771 TMX2Q9Y320 296 aa25.53■■□□□ 1.68
PDLIM3-203ENST00000284771 ST3GAL1Q11201 340 aa25.52■■□□□ 1.68
PDLIM3-203ENST00000284771 STK3Q13188 491 aa25.52■■□□□ 1.68
PDLIM3-203ENST00000284771 KIAA1755Q5JYT7 1200 aa25.52■■□□□ 1.68
PDLIM3-203ENST00000284771 CHMP4CQ96CF2 233 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms