RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 STRBPQ96SI9 672 aaKnown RBP21.16■□□□□ 0.98
SSC4D-201ENST00000275560 CHP1Q99653 195 aa21.16■□□□□ 0.98
SSC4D-201ENST00000275560 ARMT1Q9H993 441 aa21.16■□□□□ 0.98
SSC4D-201ENST00000275560 PLEKHG2Q9H7P9 1386 aa21.16■□□□□ 0.98
SSC4D-201ENST00000275560 SRGAP2O75044 1071 aa21.15■□□□□ 0.98
SSC4D-201ENST00000275560 PRDM1O75626 825 aa21.15■□□□□ 0.98
SSC4D-201ENST00000275560 RTN1Q16799 776 aa21.15■□□□□ 0.98
SSC4D-201ENST00000275560 HSP90B2PQ58FF3 399 aa21.15■□□□□ 0.98
SSC4D-201ENST00000275560 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.15■□□□□ 0.98
SSC4D-201ENST00000275560 STRN4Q9NRL3 753 aa21.15■□□□□ 0.98
SSC4D-201ENST00000275560 GUCA1BQ9UMX6 200 aa21.15■□□□□ 0.98
SSC4D-201ENST00000275560 MAPK8IP1Q9UQF2 711 aa21.15■□□□□ 0.98
SSC4D-201ENST00000275560 RIC1Q4ADV7 1423 aa21.15■□□□□ 0.98
SSC4D-201ENST00000275560 NUP188Q5SRE5 1749 aa21.15■□□□□ 0.98
SSC4D-201ENST00000275560 PPP1R3GB7ZBB8 358 aa21.15■□□□□ 0.98
SSC4D-201ENST00000275560 GPTP24298 496 aa21.15■□□□□ 0.98
SSC4D-201ENST00000275560 GSPT2Q8IYD1 628 aaKnown RBP21.15■□□□□ 0.98
SSC4D-201ENST00000275560 ELOA2Q8IYF1 753 aaPredicted RBP21.15■□□□□ 0.98
SSC4D-201ENST00000275560 SYMPKQ92797 1274 aaKnown RBP21.15■□□□□ 0.98
SSC4D-201ENST00000275560 NUP88Q99567 741 aaPredicted RBP21.15■□□□□ 0.98
SSC4D-201ENST00000275560 NAA15Q9BXJ9 866 aaKnown RBP21.15■□□□□ 0.98
SSC4D-201ENST00000275560 GREM2Q9H772 168 aa21.15■□□□□ 0.98
SSC4D-201ENST00000275560 TAB2Q9NYJ8 693 aa21.15■□□□□ 0.98
SSC4D-201ENST00000275560 SMIM22K7EJ46 135 aa21.14■□□□□ 0.98
SSC4D-201ENST00000275560 PACS2Q86VP3 889 aa21.14■□□□□ 0.98
SSC4D-201ENST00000275560 NAPBQ9H115 298 aa21.14■□□□□ 0.98
SSC4D-201ENST00000275560 VPS54Q9P1Q0 977 aa21.14■□□□□ 0.98
SSC4D-201ENST00000275560 MBD4O95243 580 aa21.14■□□□□ 0.97
SSC4D-201ENST00000275560 KRT31Q15323 416 aa21.14■□□□□ 0.97
SSC4D-201ENST00000275560 TRIM22Q8IYM9 498 aa21.14■□□□□ 0.97
SSC4D-201ENST00000275560 IFNL3Q8IZI9 196 aa21.14■□□□□ 0.97
SSC4D-201ENST00000275560 ABHD10Q9NUJ1 306 aa21.14■□□□□ 0.97
SSC4D-201ENST00000275560 PKD1L3Q7Z443 1732 aa21.14■□□□□ 0.97
SSC4D-201ENST00000275560 EIF3CLB5ME19 914 aaKnown RBP21.14■□□□□ 0.97
SSC4D-201ENST00000275560 POTEB2H3BUK9 544 aa21.14■□□□□ 0.97
SSC4D-201ENST00000275560 N4BP3O15049 544 aa21.14■□□□□ 0.97
SSC4D-201ENST00000275560 EIF3CQ99613 913 aaKnown RBP21.14■□□□□ 0.97
SSC4D-201ENST00000275560 MYO6Q9UM54 1294 aa21.14■□□□□ 0.97
SSC4D-201ENST00000275560 LMTK3Q96Q04 1460 aa21.13■□□□□ 0.97
SSC4D-201ENST00000275560 RNF40O75150 1001 aa21.13■□□□□ 0.97
SSC4D-201ENST00000275560 CAPZA3Q96KX2 299 aa21.13■□□□□ 0.97
SSC4D-201ENST00000275560 FOXP1Q9H334 677 aaPredicted RBP21.13■□□□□ 0.97
SSC4D-201ENST00000275560 CNNM1Q9NRU3 951 aa21.13■□□□□ 0.97
SSC4D-201ENST00000275560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.13■□□□□ 0.97
SSC4D-201ENST00000275560 RIPOR2Q9Y4F9 1068 aa21.13■□□□□ 0.97
SSC4D-201ENST00000275560 STK36Q9NRP7 1315 aa21.13■□□□□ 0.97
SSC4D-201ENST00000275560 IVLP07476 585 aa21.13■□□□□ 0.97
SSC4D-201ENST00000275560 FILIP1LQ4L180 1135 aa21.13■□□□□ 0.97
SSC4D-201ENST00000275560 CNGA4Q8IV77 575 aa21.13■□□□□ 0.97
SSC4D-201ENST00000275560 TTF2Q9UNY4 1162 aaKnown RBP21.13■□□□□ 0.97
SSC4D-201ENST00000275560 TCRBV5S4A2TA0A5A2 114 aa21.12■□□□□ 0.97
SSC4D-201ENST00000275560 ITGA6P23229 1130 aa21.12■□□□□ 0.97
SSC4D-201ENST00000275560 LIFRP42702 1097 aa21.12■□□□□ 0.97
SSC4D-201ENST00000275560 ANKLE2Q86XL3 938 aa21.12■□□□□ 0.97
SSC4D-201ENST00000275560 CRACR2BQ8N4Y2 399 aaPredicted RBP21.12■□□□□ 0.97
SSC4D-201ENST00000275560 MAGEB6Q8N7X4 407 aa21.12■□□□□ 0.97
SSC4D-201ENST00000275560 ISCA1Q9BUE6 129 aa21.12■□□□□ 0.97
SSC4D-201ENST00000275560 AMPD2Q01433 879 aa21.12■□□□□ 0.97
SSC4D-201ENST00000275560 FAM71BQ8TC56 605 aa21.12■□□□□ 0.97
SSC4D-201ENST00000275560 REXO2Q9Y3B8 237 aaKnown RBP21.12■□□□□ 0.97
SSC4D-201ENST00000275560 SYF2O95926 243 aaKnown RBP21.11■□□□□ 0.97
SSC4D-201ENST00000275560 KANK3Q6NY19 840 aa21.11■□□□□ 0.97
SSC4D-201ENST00000275560 ZNF579Q8NAF0 562 aaKnown RBP21.11■□□□□ 0.97
SSC4D-201ENST00000275560 TTLL11Q8NHH1 800 aa21.11■□□□□ 0.97
SSC4D-201ENST00000275560 WASF1Q92558 559 aa21.11■□□□□ 0.97
SSC4D-201ENST00000275560 RABEP2Q9H5N1 569 aa21.11■□□□□ 0.97
SSC4D-201ENST00000275560 KRT9P35527 623 aa21.11■□□□□ 0.97
SSC4D-201ENST00000275560 TCIRG1Q13488 830 aa21.11■□□□□ 0.97
SSC4D-201ENST00000275560 WTAPQ15007 396 aa21.11■□□□□ 0.97
SSC4D-201ENST00000275560 ZNF174Q15697 407 aa21.11■□□□□ 0.97
SSC4D-201ENST00000275560 MMS19Q96T76 1030 aa21.11■□□□□ 0.97
SSC4D-201ENST00000275560 MAP3K15Q6ZN16 1313 aa21.11■□□□□ 0.97
SSC4D-201ENST00000275560 BAZ2BQ9UIF8 2168 aaKnown RBP21.1■□□□□ 0.97
SSC4D-201ENST00000275560 UBE3CQ15386 1083 aa21.1■□□□□ 0.97
SSC4D-201ENST00000275560 WHAMMP3Q1A5X7 153 aa21.1■□□□□ 0.97
SSC4D-201ENST00000275560 MFSD6Q6ZSS7 791 aa21.1■□□□□ 0.97
SSC4D-201ENST00000275560 MST1RQ04912 1400 aa21.1■□□□□ 0.97
SSC4D-201ENST00000275560 FER1L4A9Z1Z3 1794 aa21.1■□□□□ 0.97
SSC4D-201ENST00000275560 PIP4K2BP78356 416 aa21.1■□□□□ 0.97
SSC4D-201ENST00000275560 AKNAD1Q5T1N1 836 aa21.1■□□□□ 0.97
SSC4D-201ENST00000275560 RRAGBQ5VZM2 374 aa21.1■□□□□ 0.97
SSC4D-201ENST00000275560 TRIM75PA6NK02 468 aa21.09■□□□□ 0.97
SSC4D-201ENST00000275560 DEXIO95424 95 aa21.09■□□□□ 0.97
SSC4D-201ENST00000275560 ATP1A1P05023 1023 aaKnown RBP21.09■□□□□ 0.97
SSC4D-201ENST00000275560 TMTC1Q8IUR5 882 aa21.09■□□□□ 0.97
SSC4D-201ENST00000275560 TBC1D2BQ9UPU7 963 aa21.09■□□□□ 0.97
SSC4D-201ENST00000275560 SH3RF1Q7Z6J0 888 aa21.09■□□□□ 0.97
SSC4D-201ENST00000275560 CTAGE1Q96RT6 745 aa21.09■□□□□ 0.97
SSC4D-201ENST00000275560 PATL2C9JE40 543 aaKnown RBP21.08■□□□□ 0.97
SSC4D-201ENST00000275560 MYBL2P10244 700 aa21.08■□□□□ 0.97
SSC4D-201ENST00000275560 CYP26C1Q6V0L0 522 aa21.08■□□□□ 0.97
SSC4D-201ENST00000275560 MIGA1Q8NAN2 632 aa21.08■□□□□ 0.97
SSC4D-201ENST00000275560 AATFQ9NY61 560 aaKnown RBP eCLIP21.08■□□□□ 0.97
SSC4D-201ENST00000275560 TRPM3Q9HCF6 1732 aaPredicted RBP21.08■□□□□ 0.97
SSC4D-201ENST00000275560 GSG1L2A8MUP6 293 aa21.08■□□□□ 0.96
SSC4D-201ENST00000275560 PES1O00541 588 aaKnown RBP21.08■□□□□ 0.96
SSC4D-201ENST00000275560 CSF1RP07333 972 aa21.08■□□□□ 0.96
SSC4D-201ENST00000275560 TDO2P48775 406 aa21.08■□□□□ 0.96
SSC4D-201ENST00000275560 COPB1P53618 953 aaKnown RBP21.08■□□□□ 0.96
SSC4D-201ENST00000275560 EEF2KMTQ96G04 330 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms