RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 MCTP2Q6DN12 878 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 TPTE2Q6XPS3 522 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 EIF3CQ99613 913 aaKnown RBP8.82□□□□□ -1
LIMD1-201ENST00000273317 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.82□□□□□ -1
LIMD1-201ENST00000273317 SAR1BQ9Y6B6 198 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 POLD1P28340 1107 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 DCUN1D2Q6PH85 259 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 FRMD3A2A2Y4 597 aa8.82□□□□□ -1
LIMD1-201ENST00000273317 IRS4O14654 1257 aaPredicted RBP8.82□□□□□ -1
LIMD1-201ENST00000273317 DAPK3O43293 454 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 RIC8AQ9NPQ8 531 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 BANK1Q8NDB2 785 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 AMFRQ9UKV5 643 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 SBNO1A3KN83 1393 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 CEP104O60308 925 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 U2AF2P26368 475 aaKnown RBP eCLIP8.81□□□□□ -16e-7■■□□□ 14.5
LIMD1-201ENST00000273317 LETM2Q2VYF4 491 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 TRIML1Q8N9V2 468 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 CDC25BP30305 580 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 PPP1R21Q6ZMI0 780 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 FAM170AA1A519 330 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 PSDA5PKW4 1024 aaPredicted RBP8.81□□□□□ -1
LIMD1-201ENST00000273317 KRT3P12035 628 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 ANKRD20A3Q5VUR7 823 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 TEKT1Q969V4 418 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 KRT12Q99456 494 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 PPP1R12CQ9BZL4 782 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 HIP1RO75146 1068 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 MORC4Q8TE76 937 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 DNAJC8O75937 253 aaPredicted RBP8.81□□□□□ -1
LIMD1-201ENST00000273317 HOXA7P31268 230 aaPredicted RBP8.81□□□□□ -1
LIMD1-201ENST00000273317 STX2P32856 288 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 PICK1Q9NRD5 415 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 PNMA2Q9UL42 364 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 DNM3Q9UQ16 869 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 MGEA5O60502 916 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 RNASELQ05823 741 aaKnown RBP8.81□□□□□ -1
LIMD1-201ENST00000273317 PARP10Q53GL7 1025 aa8.81□□□□□ -1
LIMD1-201ENST00000273317 PNMA8AQ86V59 439 aaPredicted RBP8.81□□□□□ -1
LIMD1-201ENST00000273317 EFCAB8A8MWE9 144 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 KRT9P35527 623 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 GSDMBQ8TAX9 411 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 MROH5Q6ZUA9 1318 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 HGSO14964 777 aaPredicted RBP8.8□□□□□ -1
LIMD1-201ENST00000273317 KRT15P19012 456 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 SLC17A8Q8NDX2 589 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 RNF34Q969K3 372 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 ZBTB17Q13105 803 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 ATP7AQ04656 1500 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 SLC12A2P55011 1212 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 KLHL30Q0D2K2 578 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 VTI1AQ96AJ9 217 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 NFE2L3Q9Y4A8 694 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 TBC1D8O95759 1140 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 TNNI3KQ59H18 835 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 NBPF14Q5TI25 921 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 PIK3AP1Q6ZUJ8 805 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 DZIP3Q86Y13 1208 aaKnown RBP8.8□□□□□ -1
LIMD1-201ENST00000273317 FPGT-TNNI3KV9GXZ4 949 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 A0A1W2PP64 1363 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 ADAMTS2O95450 1211 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 NONOQ15233 471 aaKnown RBP eCLIP8.8□□□□□ -1
LIMD1-201ENST00000273317 PDZD4Q76G19 769 aaPredicted RBP8.8□□□□□ -1
LIMD1-201ENST00000273317 DRC3Q9H069 523 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 MRPL44Q9H9J2 332 aaKnown RBP8.8□□□□□ -1
LIMD1-201ENST00000273317 HYOU1Q9Y4L1 999 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 VAMP4O75379 141 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 RFC1P35251 1148 aaPredicted RBP8.8□□□□□ -1
LIMD1-201ENST00000273317 GABPAQ06546 454 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 APPBP2Q92624 585 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 SNCBQ16143 134 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 REXO1Q8N1G1 1221 aaKnown RBP8.8□□□□□ -1
LIMD1-201ENST00000273317 TSC1Q92574 1164 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 CARD10Q9BWT7 1032 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 VPS16Q9H269 839 aa8.8□□□□□ -1
LIMD1-201ENST00000273317 TSPYL2Q9H2G4 693 aaPredicted RBP8.8□□□□□ -1
LIMD1-201ENST00000273317 KCNJ18B7U540 433 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 KCNJ12Q14500 433 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 TEX11Q8IYF3 940 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 DDX27Q96GQ7 796 aaKnown RBP8.79□□□□□ -1
LIMD1-201ENST00000273317 MYCBPQ99417 103 aaPredicted RBP8.79□□□□□ -1
LIMD1-201ENST00000273317 METTL22Q9BUU2 404 aaPredicted RBP8.79□□□□□ -1
LIMD1-201ENST00000273317 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.79□□□□□ -1
LIMD1-201ENST00000273317 GALNT17Q6IS24 598 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 SIRT1Q96EB6 747 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 TM6SF1Q9BZW5 370 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 CCDC169A6NNP5 214 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 CTNNA1P35221 906 aaKnown RBP8.79□□□□□ -1
LIMD1-201ENST00000273317 MIGA1Q8NAN2 632 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 CARD6Q9BX69 1037 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 PARP3Q9Y6F1 533 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 CDCA7Q9BWT1 371 aaPredicted RBP8.79□□□□□ -1
LIMD1-201ENST00000273317 VPS37BQ9H9H4 285 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 VEZTQ9HBM0 779 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 ZNF219Q9P2Y4 722 aaPredicted RBP8.79□□□□□ -1
LIMD1-201ENST00000273317 SBNO2Q9Y2G9 1366 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 PFDN6O15212 129 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 HSP90AA5PQ58FG0 334 aa8.79□□□□□ -1
LIMD1-201ENST00000273317 SND1Q7KZF4 910 aaKnown RBP eCLIP8.79□□□□□ -1
LIMD1-201ENST00000273317 PLBD2Q8NHP8 589 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms