RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 EVI5O60447 810 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 CALML3P27482 149 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 SLFN5Q08AF3 891 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 SF3B3Q15393 1217 aaKnown RBP17.36■□□□□ 0.37
UBR3-201ENST00000272793 AHI1Q8N157 1196 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 NOX5Q96PH1 765 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 MED10Q9BTT4 135 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 SUGT1Q9Y2Z0 365 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 WDR48Q8TAF3 677 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 JARID2Q92833 1246 aaPredicted RBP17.36■□□□□ 0.37
UBR3-201ENST00000272793 ANKRD30BQ9BXX2 1392 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 KRT71Q3SY84 523 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 HOOK2Q96ED9 719 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 DHX29Q7Z478 1369 aaKnown RBP17.36■□□□□ 0.37
UBR3-201ENST00000272793 KRT19P08727 400 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 LONRF3Q496Y0 759 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 RAPGEF5Q92565 580 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 MYO1AQ9UBC5 1043 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 BMP15O95972 392 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 GPTP24298 496 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 CDC26Q8NHZ8 85 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 TRMT112Q9UI30 125 aaKnown RBP17.36■□□□□ 0.37
UBR3-201ENST00000272793 FIS1Q9Y3D6 152 aa17.36■□□□□ 0.37
UBR3-201ENST00000272793 BEND3Q5T5X7 828 aa17.35■□□□□ 0.37
UBR3-201ENST00000272793 CHST3Q7LGC8 479 aa17.35■□□□□ 0.37
UBR3-201ENST00000272793 OTULINQ96BN8 352 aa17.35■□□□□ 0.37
UBR3-201ENST00000272793 KIF9Q9HAQ2 790 aa17.35■□□□□ 0.37
UBR3-201ENST00000272793 KDM1AO60341 852 aa17.35■□□□□ 0.37
UBR3-201ENST00000272793 DDX28Q9NUL7 540 aaKnown RBP17.35■□□□□ 0.37
UBR3-201ENST00000272793 DIAPH2O60879 1101 aa17.35■□□□□ 0.37
UBR3-201ENST00000272793 NOC4LQ9BVI4 516 aaKnown RBP17.35■□□□□ 0.37
UBR3-201ENST00000272793 UBE3AQ05086 875 aa17.35■□□□□ 0.37
UBR3-201ENST00000272793 ANGPT1Q15389 498 aa17.35■□□□□ 0.37
UBR3-201ENST00000272793 CROCCP2Q86T23 111 aa17.35■□□□□ 0.37
UBR3-201ENST00000272793 BRF1Q92994 677 aa17.35■□□□□ 0.37
UBR3-201ENST00000272793 KRT23Q9C075 422 aa17.35■□□□□ 0.37
UBR3-201ENST00000272793 TMOD3Q9NYL9 352 aa17.35■□□□□ 0.37
UBR3-201ENST00000272793 TRAF5O00463 557 aa17.35■□□□□ 0.37
UBR3-201ENST00000272793 FMNL1O95466 1100 aaPredicted RBP17.35■□□□□ 0.37
UBR3-201ENST00000272793 OGFOD1Q8N543 542 aa17.35■□□□□ 0.37
UBR3-201ENST00000272793 RAPGEF2Q9Y4G8 1499 aa17.35■□□□□ 0.37
UBR3-201ENST00000272793 PRR23D1E9PI22 279 aaPredicted RBP17.34■□□□□ 0.37
UBR3-201ENST00000272793 PRR23D2P0DMB1 279 aaPredicted RBP17.34■□□□□ 0.37
UBR3-201ENST00000272793 TRAF1Q13077 416 aa17.34■□□□□ 0.37
UBR3-201ENST00000272793 LMNB1P20700 586 aa17.34■□□□□ 0.37
UBR3-201ENST00000272793 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.34■□□□□ 0.37
UBR3-201ENST00000272793 ART3Q13508 389 aa17.34■□□□□ 0.37
UBR3-201ENST00000272793 KRT79Q5XKE5 535 aa17.34■□□□□ 0.37
UBR3-201ENST00000272793 DBNLQ9UJU6 430 aaKnown RBP17.34■□□□□ 0.37
UBR3-201ENST00000272793 IFRD2Q12894 506 aaPredicted RBP17.34■□□□□ 0.37
UBR3-201ENST00000272793 PLEKHM3Q6ZWE6 761 aa17.34■□□□□ 0.37
UBR3-201ENST00000272793 FBXO41Q8TF61 875 aa17.34■□□□□ 0.37
UBR3-201ENST00000272793 PARP2Q9UGN5 583 aa17.34■□□□□ 0.37
UBR3-201ENST00000272793 KRT87PA6NCN2 255 aa17.34■□□□□ 0.37
UBR3-201ENST00000272793 CCDC15Q0P6D6 951 aa17.34■□□□□ 0.37
UBR3-201ENST00000272793 MPRIPQ6WCQ1 1025 aa17.34■□□□□ 0.37
UBR3-201ENST00000272793 EFHD1Q9BUP0 239 aa17.34■□□□□ 0.37
UBR3-201ENST00000272793 PRPF6O94906 941 aaKnown RBP17.34■□□□□ 0.37
UBR3-201ENST00000272793 HMGB2P26583 209 aaKnown RBP17.34■□□□□ 0.37
UBR3-201ENST00000272793 EEF1GP26641 437 aaKnown RBP17.34■□□□□ 0.37
UBR3-201ENST00000272793 TMTC3Q6ZXV5 915 aa17.34■□□□□ 0.37
UBR3-201ENST00000272793 RRP36Q96EU6 259 aaKnown RBP17.34■□□□□ 0.37
UBR3-201ENST00000272793 OAS2P29728 719 aaKnown RBP17.34■□□□□ 0.37
UBR3-201ENST00000272793 GUCY2FP51841 1108 aa17.34■□□□□ 0.37
UBR3-201ENST00000272793 CARD6Q9BX69 1037 aa17.34■□□□□ 0.37
UBR3-201ENST00000272793 ZNF644Q9H582 1327 aaPredicted RBP17.33■□□□□ 0.37
UBR3-201ENST00000272793 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.33■□□□□ 0.37
UBR3-201ENST00000272793 ATG3Q9NT62 314 aa17.33■□□□□ 0.37
UBR3-201ENST00000272793 RAB17Q9H0T7 212 aa17.33■□□□□ 0.37
UBR3-201ENST00000272793 SBNO2Q9Y2G9 1366 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 DYTNA2CJ06 578 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 Q6ZUG5 572 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 MCUQ8NE86 351 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 B4GALNT2Q8NHY0 566 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 GRIN1Q05586 938 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 VWA3BQ502W6 1294 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 HDDC2Q7Z4H3 204 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 TRIM50Q86XT4 487 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 TEX11Q8IYF3 940 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 KIF17Q9P2E2 1029 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 GSTO1P78417 241 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 RAB44Q7Z6P3 723 aaPredicted RBP17.33■□□□□ 0.36
UBR3-201ENST00000272793 TEX12Q9BXU0 123 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 GOLGA8CPA6NN73 597 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 NOP56O00567 594 aaKnown RBP17.33■□□□□ 0.36
UBR3-201ENST00000272793 ATP1A2P50993 1020 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 OCA2Q04671 838 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 DONSONQ9NYP3 566 aa17.33■□□□□ 0.36
UBR3-201ENST00000272793 CAPN9O14815 690 aa17.32■□□□□ 0.36
UBR3-201ENST00000272793 CALUO43852 315 aaPredicted RBP17.32■□□□□ 0.36
UBR3-201ENST00000272793 NFE2L2Q16236 605 aa17.32■□□□□ 0.36
UBR3-201ENST00000272793 SND1Q7KZF4 910 aaKnown RBP eCLIP17.32■□□□□ 0.36
UBR3-201ENST00000272793 SLC9A1P19634 815 aa17.32■□□□□ 0.36
UBR3-201ENST00000272793 TUBB4AP04350 444 aa17.32■□□□□ 0.36
UBR3-201ENST00000272793 CYP26C1Q6V0L0 522 aa17.32■□□□□ 0.36
UBR3-201ENST00000272793 USHBP1Q8N6Y0 703 aa17.32■□□□□ 0.36
UBR3-201ENST00000272793 TBC1D32Q96NH3 1257 aa17.32■□□□□ 0.36
UBR3-201ENST00000272793 BFSP1Q12934 665 aa17.32■□□□□ 0.36
UBR3-201ENST00000272793 ARMC2Q8NEN0 867 aa17.32■□□□□ 0.36
UBR3-201ENST00000272793 RARSP54136 660 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms