RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 FUT2Q10981 343 aa17.67■□□□□ 0.42
SF3B4-201ENST00000271628 STRIP1Q5VSL9 837 aa17.67■□□□□ 0.42
SF3B4-201ENST00000271628 NOSTRINQ8IVI9 506 aa17.67■□□□□ 0.42
SF3B4-201ENST00000271628 JMYQ8N9B5 988 aa17.67■□□□□ 0.42
SF3B4-201ENST00000271628 SUPT20HQ8NEM7 779 aa17.67■□□□□ 0.42
SF3B4-201ENST00000271628 TEKT1Q969V4 418 aa17.67■□□□□ 0.42
SF3B4-201ENST00000271628 IL17RBQ9NRM6 502 aa17.67■□□□□ 0.42
SF3B4-201ENST00000271628 MYH1P12882 1939 aa17.67■□□□□ 0.42
SF3B4-201ENST00000271628 DDX60LQ5H9U9 1706 aaKnown RBP17.67■□□□□ 0.42
SF3B4-201ENST00000271628 F8W031 263 aaPredicted RBP17.67■□□□□ 0.42
SF3B4-201ENST00000271628 RRP9O43818 475 aaKnown RBP17.67■□□□□ 0.42
SF3B4-201ENST00000271628 CDK8P49336 464 aa17.67■□□□□ 0.42
SF3B4-201ENST00000271628 SLC39A14Q15043 492 aa17.67■□□□□ 0.42
SF3B4-201ENST00000271628 RBM43Q6ZSC3 357 aaKnown RBP17.67■□□□□ 0.42
SF3B4-201ENST00000271628 DIS3L2Q8IYB7 885 aaKnown RBP17.67■□□□□ 0.42
SF3B4-201ENST00000271628 SLC16A10Q8TF71 515 aa17.67■□□□□ 0.42
SF3B4-201ENST00000271628 C7orf43Q8WVR3 580 aa17.67■□□□□ 0.42
SF3B4-201ENST00000271628 UBE2Q2LH0YL09 131 aa17.66■□□□□ 0.42
SF3B4-201ENST00000271628 RASA1P20936 1047 aa17.66■□□□□ 0.42
SF3B4-201ENST00000271628 FAM160A1Q05DH4 1040 aa17.66■□□□□ 0.42
SF3B4-201ENST00000271628 CAMK4Q16566 473 aa17.66■□□□□ 0.42
SF3B4-201ENST00000271628 PNMA1Q8ND90 353 aa17.66■□□□□ 0.42
SF3B4-201ENST00000271628 MRPS27Q92552 414 aaKnown RBP17.66■□□□□ 0.42
SF3B4-201ENST00000271628 DBNDD1Q9H9R9 158 aa17.66■□□□□ 0.42
SF3B4-201ENST00000271628 V9GY48 417 aaPredicted RBP17.66■□□□□ 0.42
SF3B4-201ENST00000271628 PPP6R2O75170 966 aa17.65■□□□□ 0.42
SF3B4-201ENST00000271628 PLEKHA8P1O95397 391 aa17.65■□□□□ 0.42
SF3B4-201ENST00000271628 GNAQP50148 359 aa17.65■□□□□ 0.42
SF3B4-201ENST00000271628 TAOK2Q9UL54 1235 aa17.65■□□□□ 0.42
SF3B4-201ENST00000271628 BTBD18B2RXH4 712 aa17.65■□□□□ 0.42
SF3B4-201ENST00000271628 PKN1Q16512 942 aa17.65■□□□□ 0.42
SF3B4-201ENST00000271628 RILPL1Q5EBL4 403 aa17.65■□□□□ 0.42
SF3B4-201ENST00000271628 USP40Q9NVE5 1235 aa17.65■□□□□ 0.42
SF3B4-201ENST00000271628 KCNJ14Q9UNX9 436 aa17.65■□□□□ 0.42
SF3B4-201ENST00000271628 KINO60870 393 aaKnown RBP17.64■□□□□ 0.41
SF3B4-201ENST00000271628 HDLBPQ00341 1268 aaKnown RBP17.64■□□□□ 0.41
SF3B4-201ENST00000271628 SRBD1Q8N5C6 995 aaKnown RBP17.64■□□□□ 0.41
SF3B4-201ENST00000271628 FSIP1Q8NA03 581 aa17.64■□□□□ 0.41
SF3B4-201ENST00000271628 ENGASEQ8NFI3 743 aa17.64■□□□□ 0.41
SF3B4-201ENST00000271628 NEDD1Q8NHV4 660 aa17.64■□□□□ 0.41
SF3B4-201ENST00000271628 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.64■□□□□ 0.41
SF3B4-201ENST00000271628 ECE2O60344 883 aa17.63■□□□□ 0.41
SF3B4-201ENST00000271628 PTMAP06454 111 aaKnown RBP17.63■□□□□ 0.41
SF3B4-201ENST00000271628 SNW1Q13573 536 aaKnown RBP17.63■□□□□ 0.41
SF3B4-201ENST00000271628 SLC44A5Q8NCS7 719 aa17.63■□□□□ 0.41
SF3B4-201ENST00000271628 BRMS1Q9HCU9 246 aa17.63■□□□□ 0.41
SF3B4-201ENST00000271628 STX8Q9UNK0 236 aa17.63■□□□□ 0.41
SF3B4-201ENST00000271628 CNTNAP5Q8WYK1 1306 aa17.63■□□□□ 0.41
SF3B4-201ENST00000271628 USP17L3A6NCW0 530 aa17.63■□□□□ 0.41
SF3B4-201ENST00000271628 USP17L4A6NCW7 530 aa17.63■□□□□ 0.41
SF3B4-201ENST00000271628 KIAA2012Q0VF49 1180 aa17.63■□□□□ 0.41
SF3B4-201ENST00000271628 USP17L1Q7RTZ2 530 aa17.63■□□□□ 0.41
SF3B4-201ENST00000271628 ZDHHC15Q96MV8 337 aa17.63■□□□□ 0.41
SF3B4-201ENST00000271628 PHF20Q9BVI0 1012 aa17.63■□□□□ 0.41
SF3B4-201ENST00000271628 MXD3Q9BW11 206 aa17.63■□□□□ 0.41
SF3B4-201ENST00000271628 ZNF219Q9P2Y4 722 aaPredicted RBP17.63■□□□□ 0.41
SF3B4-201ENST00000271628 WDHD1O75717 1129 aaPredicted RBP17.62■□□□□ 0.41
SF3B4-201ENST00000271628 CMA1P23946 247 aa17.62■□□□□ 0.41
SF3B4-201ENST00000271628 CRKP46108 304 aa17.62■□□□□ 0.41
SF3B4-201ENST00000271628 SCNN1DP51172 638 aa17.62■□□□□ 0.41
SF3B4-201ENST00000271628 PICALMQ13492 652 aa17.62■□□□□ 0.41
SF3B4-201ENST00000271628 HSP90AA2PQ14568 343 aaPredicted RBP17.62■□□□□ 0.41
SF3B4-201ENST00000271628 DACT2Q5SW24 774 aa17.62■□□□□ 0.41
SF3B4-201ENST00000271628 SASS6Q6UVJ0 657 aa17.62■□□□□ 0.41
SF3B4-201ENST00000271628 DEFB132Q7Z7B7 95 aa17.62■□□□□ 0.41
SF3B4-201ENST00000271628 GOLPH3LQ9H4A5 285 aa17.62■□□□□ 0.41
SF3B4-201ENST00000271628 GRM4Q14833 912 aa17.62■□□□□ 0.41
SF3B4-201ENST00000271628 PTPAQ15257 358 aa17.62■□□□□ 0.41
SF3B4-201ENST00000271628 APOBEC3HQ6NTF7 200 aaKnown RBP17.62■□□□□ 0.41
SF3B4-201ENST00000271628 SWAP70Q9UH65 585 aa17.62■□□□□ 0.41
SF3B4-201ENST00000271628 C10orf71Q711Q0 1435 aa17.61■□□□□ 0.41
SF3B4-201ENST00000271628 KRT2P35908 639 aa17.61■□□□□ 0.41
SF3B4-201ENST00000271628 TYRO3Q06418 890 aa17.61■□□□□ 0.41
SF3B4-201ENST00000271628 CDC42EP5Q6NZY7 148 aa17.61■□□□□ 0.41
SF3B4-201ENST00000271628 CKAP2LQ8IYA6 745 aa17.61■□□□□ 0.41
SF3B4-201ENST00000271628 FMR1NBQ8N0W7 255 aaPredicted RBP17.61■□□□□ 0.41
SF3B4-201ENST00000271628 TTLL6Q8N841 843 aa17.61■□□□□ 0.41
SF3B4-201ENST00000271628 TMEM47Q9BQJ4 181 aa17.61■□□□□ 0.41
SF3B4-201ENST00000271628 LZTS2Q9BRK4 669 aa17.61■□□□□ 0.41
SF3B4-201ENST00000271628 VPS54Q9P1Q0 977 aa17.61■□□□□ 0.41
SF3B4-201ENST00000271628 CEP131Q9UPN4 1083 aa17.61■□□□□ 0.41
SF3B4-201ENST00000271628 CAVIN2O95810 425 aa17.6■□□□□ 0.41
SF3B4-201ENST00000271628 SCG2P13521 617 aa17.6■□□□□ 0.41
SF3B4-201ENST00000271628 GABPAQ06546 454 aa17.6■□□□□ 0.41
SF3B4-201ENST00000271628 PFKFB3Q16875 520 aaPredicted RBP17.6■□□□□ 0.41
SF3B4-201ENST00000271628 AXDND1Q5T1B0 1012 aaPredicted RBP17.6■□□□□ 0.41
SF3B4-201ENST00000271628 OSBPL5Q9H0X9 879 aaPredicted RBP17.6■□□□□ 0.41
SF3B4-201ENST00000271628 SERPINB13Q9UIV8 391 aa17.6■□□□□ 0.41
SF3B4-201ENST00000271628 SNED1Q8TER0 1413 aa17.6■□□□□ 0.41
SF3B4-201ENST00000271628 MYO3BQ8WXR4 1341 aa17.6■□□□□ 0.41
SF3B4-201ENST00000271628 HLA-DOAP06340 250 aa17.6■□□□□ 0.41
SF3B4-201ENST00000271628 NOVP48745 357 aa17.6■□□□□ 0.41
SF3B4-201ENST00000271628 AOC3Q16853 763 aa17.6■□□□□ 0.41
SF3B4-201ENST00000271628 RTKN2Q8IZC4 609 aa17.6■□□□□ 0.41
SF3B4-201ENST00000271628 KCNQ5Q9NR82 932 aa17.6■□□□□ 0.41
SF3B4-201ENST00000271628 SERPINA10Q9UK55 444 aa17.6■□□□□ 0.41
SF3B4-201ENST00000271628 A0A1B0GVL5 298 aa17.59■□□□□ 0.41
SF3B4-201ENST00000271628 NR5A1Q13285 461 aa17.59■□□□□ 0.41
SF3B4-201ENST00000271628 KIAA0825Q8IV33 1275 aa17.59■□□□□ 0.41
SF3B4-201ENST00000271628 PDGFDQ9GZP0 370 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms