RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 SLC7A5Q01650 507 aa16.82■□□□□ 0.28
CASC3-201ENST00000264645 TTC38Q5R3I4 469 aa16.82■□□□□ 0.28
CASC3-201ENST00000264645 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
CASC3-201ENST00000264645 METTL22Q9BUU2 404 aaPredicted RBP16.82■□□□□ 0.28
CASC3-201ENST00000264645 CXorf56Q9H5V9 222 aa16.82■□□□□ 0.28
CASC3-201ENST00000264645 CEP83Q9Y592 693 aa16.82■□□□□ 0.28
CASC3-201ENST00000264645 RNMTO43148 476 aaKnown RBP16.82■□□□□ 0.28
CASC3-201ENST00000264645 SASH1O94885 1247 aa16.82■□□□□ 0.28
CASC3-201ENST00000264645 CYP7A1P22680 504 aa16.82■□□□□ 0.28
CASC3-201ENST00000264645 GUCY2CP25092 1073 aa16.82■□□□□ 0.28
CASC3-201ENST00000264645 PTPROQ16827 1216 aa16.82■□□□□ 0.28
CASC3-201ENST00000264645 MAGEB6Q8N7X4 407 aa16.82■□□□□ 0.28
CASC3-201ENST00000264645 TCP11Q8WWU5 503 aa16.82■□□□□ 0.28
CASC3-201ENST00000264645 KAT14Q9H8E8 782 aa16.82■□□□□ 0.28
CASC3-201ENST00000264645 COPB1P53618 953 aaKnown RBP16.81■□□□□ 0.28
CASC3-201ENST00000264645 MAP3K9P80192 1104 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 ATP11AP98196 1134 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 ACTN3Q08043 901 aaPredicted RBP16.81■□□□□ 0.28
CASC3-201ENST00000264645 IFNL2Q8IZJ0 200 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 BUB1O43683 1085 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 MBD4O95243 580 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 ERCC5P28715 1186 aaPredicted RBP16.81■□□□□ 0.28
CASC3-201ENST00000264645 SLC8A1P32418 973 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 NNTQ13423 1086 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 AP1ARQ63HQ0 302 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 RRAGAQ7L523 313 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 HEATR3Q7Z4Q2 680 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 RIN2Q8WYP3 895 aaPredicted RBP16.81■□□□□ 0.28
CASC3-201ENST00000264645 HAUS7Q99871 368 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 NLRC4Q9NPP4 1024 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 UQCRFS1P1P0C7P4 283 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 HYOU1Q9Y4L1 999 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 CHUKO15111 745 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 PPP6R2O75170 966 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 TCP1P17987 556 aaKnown RBP16.81■□□□□ 0.28
CASC3-201ENST00000264645 IFT74Q96LB3 600 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 PANX2Q96RD6 677 aa16.81■□□□□ 0.28
CASC3-201ENST00000264645 ZAP70P43403 619 aa16.8■□□□□ 0.28
CASC3-201ENST00000264645 SF3B2Q13435 895 aaKnown RBP16.8■□□□□ 0.28
CASC3-201ENST00000264645 ZNF444Q8N0Y2 327 aaPredicted RBP16.8■□□□□ 0.28
CASC3-201ENST00000264645 CCDC26Q8TAB7 109 aa16.8■□□□□ 0.28
CASC3-201ENST00000264645 FAM212AQ96EL1 285 aa16.8■□□□□ 0.28
CASC3-201ENST00000264645 ADGRG1Q9Y653 693 aa16.8■□□□□ 0.28
CASC3-201ENST00000264645 CYP27A1Q02318 531 aa16.8■□□□□ 0.28
CASC3-201ENST00000264645 XAGE2Q96GT9 111 aa16.8■□□□□ 0.28
CASC3-201ENST00000264645 MED14O60244 1454 aa16.8■□□□□ 0.28
CASC3-201ENST00000264645 CTDSPL2Q05D32 466 aa16.8■□□□□ 0.28
CASC3-201ENST00000264645 PROSER3Q2NL68 480 aa16.8■□□□□ 0.28
CASC3-201ENST00000264645 ANKLE2Q86XL3 938 aa16.8■□□□□ 0.28
CASC3-201ENST00000264645 STMN4Q9H169 189 aaPredicted RBP16.8■□□□□ 0.28
CASC3-201ENST00000264645 ARHGEF5Q12774 1597 aa16.79■□□□□ 0.28
CASC3-201ENST00000264645 TRIM68Q6AZZ1 485 aa16.79■□□□□ 0.28
CASC3-201ENST00000264645 ZNF622Q969S3 477 aaKnown RBP eCLIP16.79■□□□□ 0.284e-7■■■□□ 14.9
CASC3-201ENST00000264645 RASAL2Q9UJF2 1139 aa16.79■□□□□ 0.28
CASC3-201ENST00000264645 ATF3P18847 181 aa16.79■□□□□ 0.28
CASC3-201ENST00000264645 THEMISQ8N1K5 641 aaPredicted RBP16.79■□□□□ 0.28
CASC3-201ENST00000264645 LMBR1Q8WVP7 490 aa16.79■□□□□ 0.28
CASC3-201ENST00000264645 FUT8Q9BYC5 575 aa16.79■□□□□ 0.28
CASC3-201ENST00000264645 MYOM2P54296 1465 aa16.79■□□□□ 0.28
CASC3-201ENST00000264645 TRAF5O00463 557 aa16.79■□□□□ 0.28
CASC3-201ENST00000264645 NDUFA10O95299 355 aa16.79■□□□□ 0.28
CASC3-201ENST00000264645 STARD3NLO95772 234 aa16.79■□□□□ 0.28
CASC3-201ENST00000264645 CSRNP2Q9H175 543 aa16.79■□□□□ 0.28
CASC3-201ENST00000264645 TMX4Q9H1E5 349 aaPredicted RBP16.79■□□□□ 0.28
CASC3-201ENST00000264645 NEURL1BA8MQ27 555 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 EPHB4P54760 987 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 GRIPAP1Q4V328 841 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 LMNTD2Q8IXW0 634 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 EPB41L5Q9HCM4 733 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 FAM184BQ9ULE4 1060 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 MFAP3LO75121 409 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 PRDM1O75626 825 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 HIBCHQ6NVY1 386 aaPredicted RBP16.78■□□□□ 0.28
CASC3-201ENST00000264645 FERMT2Q96AC1 680 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 BPIFA3Q9BQP9 254 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 SPATS2LQ9NUQ6 558 aaKnown RBP16.78■□□□□ 0.28
CASC3-201ENST00000264645 ZNF446Q9NWS9 450 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 TEX33O43247 280 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 CALML3P27482 149 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 KCNJ6P48051 423 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 SETDB1Q15047 1291 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 SLC9C1Q4G0N8 1177 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 DAAM2Q86T65 1068 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 POLD4Q9HCU8 107 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 MTRF1LQ9UGC7 380 aaKnown RBP16.78■□□□□ 0.28
CASC3-201ENST00000264645 LCMT1Q9UIC8 334 aa16.78■□□□□ 0.28
CASC3-201ENST00000264645 FAM170AA1A519 330 aa16.77■□□□□ 0.28
CASC3-201ENST00000264645 ECM2O94769 699 aaPredicted RBP16.77■□□□□ 0.28
CASC3-201ENST00000264645 CAVIN4Q5BKX8 364 aa16.77■□□□□ 0.28
CASC3-201ENST00000264645 INTS8Q75QN2 995 aaKnown RBP16.77■□□□□ 0.28
CASC3-201ENST00000264645 RBM28Q9NW13 759 aaKnown RBP16.77■□□□□ 0.28
CASC3-201ENST00000264645 DNM2P50570 870 aa16.77■□□□□ 0.28
CASC3-201ENST00000264645 HDAC6Q9UBN7 1215 aa16.77■□□□□ 0.28
CASC3-201ENST00000264645 ATP10DQ9P241 1426 aa16.77■□□□□ 0.28
CASC3-201ENST00000264645 ZBTB16Q05516 673 aa16.77■□□□□ 0.27
CASC3-201ENST00000264645 RPS6KA1Q15418 735 aa16.77■□□□□ 0.27
CASC3-201ENST00000264645 ARMT1Q9H993 441 aa16.77■□□□□ 0.27
CASC3-201ENST00000264645 PSD3Q9NYI0 1048 aa16.77■□□□□ 0.27
CASC3-201ENST00000264645 TMEM110-MUSTN1A8MSY1 372 aa16.77■□□□□ 0.27
CASC3-201ENST00000264645 VSIG1Q86XK7 387 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms