RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 CDHR2Q9BYE9 1310 aa18.83■□□□□ 0.61
ZNF541-201ENST00000263351 MYH8P13535 1937 aa18.83■□□□□ 0.61
ZNF541-201ENST00000263351 A0A1B0GTH6 734 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 N4BP1O75113 896 aaKnown RBP18.83■□□□□ 0.6
ZNF541-201ENST00000263351 PPARAQ07869 468 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 RILPL1Q5EBL4 403 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 NT5DC1Q5TFE4 455 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 GPIHBP1Q8IV16 184 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 VPS16Q9H269 839 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 ADGRG1Q9Y653 693 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 SYNRGQ9UMZ2 1314 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 LRP6O75581 1613 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 AKR1B15C9JRZ8 316 aaPredicted RBP18.83■□□□□ 0.6
ZNF541-201ENST00000263351 DEXIO95424 95 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 RHOXF2BP0C7M4 288 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 CYP7A1P22680 504 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 SMC1AQ14683 1233 aaKnown RBP18.83■□□□□ 0.6
ZNF541-201ENST00000263351 ZNF569Q5MCW4 686 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 SLC51AQ86UW1 340 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 NUTM2AQ8IVF1 878 aaPredicted RBP18.83■□□□□ 0.6
ZNF541-201ENST00000263351 MLKLQ8NB16 471 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 MPHOSPH8Q99549 860 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 RHOXF2Q9BQY4 288 aa18.83■□□□□ 0.6
ZNF541-201ENST00000263351 ARGLU1Q9NWB6 273 aaPredicted RBP18.83■□□□□ 0.6
ZNF541-201ENST00000263351 SOS2Q07890 1332 aaPredicted RBP18.83■□□□□ 0.6
ZNF541-201ENST00000263351 GYPCP04921 128 aa18.82■□□□□ 0.6
ZNF541-201ENST00000263351 CUL4BQ13620 913 aa18.82■□□□□ 0.6
ZNF541-201ENST00000263351 ENAHQ8N8S7 591 aaPredicted RBP18.82■□□□□ 0.6
ZNF541-201ENST00000263351 MTRQ99707 1265 aa18.82■□□□□ 0.6
ZNF541-201ENST00000263351 UBAC1Q9BSL1 405 aa18.82■□□□□ 0.6
ZNF541-201ENST00000263351 FUT8Q9BYC5 575 aa18.82■□□□□ 0.6
ZNF541-201ENST00000263351 FOXP1Q9H334 677 aaPredicted RBP18.82■□□□□ 0.6
ZNF541-201ENST00000263351 STK36Q9NRP7 1315 aa18.82■□□□□ 0.6
ZNF541-201ENST00000263351 CCP110O43303 1012 aa18.82■□□□□ 0.6
ZNF541-201ENST00000263351 MCM6Q14566 821 aa18.82■□□□□ 0.6
ZNF541-201ENST00000263351 STAG1Q8WVM7 1258 aa18.82■□□□□ 0.6
ZNF541-201ENST00000263351 HINFPQ9BQA5 517 aa18.82■□□□□ 0.6
ZNF541-201ENST00000263351 BAZ2AQ9UIF9 1905 aaKnown RBP18.81■□□□□ 0.6
ZNF541-201ENST00000263351 UQCRFS1P1P0C7P4 283 aa18.81■□□□□ 0.6
ZNF541-201ENST00000263351 ERVK-24P63145 666 aa18.81■□□□□ 0.6
ZNF541-201ENST00000263351 IRX5P78411 483 aaPredicted RBP18.81■□□□□ 0.6
ZNF541-201ENST00000263351 ALX1Q15699 326 aa18.81■□□□□ 0.6
ZNF541-201ENST00000263351 ZNF512BQ96KM6 892 aaPredicted RBP18.81■□□□□ 0.6
ZNF541-201ENST00000263351 PLIN2Q99541 437 aa18.81■□□□□ 0.6
ZNF541-201ENST00000263351 ANKZF1Q9H8Y5 726 aa18.81■□□□□ 0.6
ZNF541-201ENST00000263351 TAB2Q9NYJ8 693 aa18.81■□□□□ 0.6
ZNF541-201ENST00000263351 ERICH2A1L162 156 aa18.81■□□□□ 0.6
ZNF541-201ENST00000263351 PPP1R3GB7ZBB8 358 aa18.81■□□□□ 0.6
ZNF541-201ENST00000263351 SLC5A1P13866 664 aa18.81■□□□□ 0.6
ZNF541-201ENST00000263351 SLC35F6Q8N357 371 aa18.81■□□□□ 0.6
ZNF541-201ENST00000263351 KRT23Q9C075 422 aa18.81■□□□□ 0.6
ZNF541-201ENST00000263351 ADD3Q9UEY8 706 aaKnown RBP18.81■□□□□ 0.6
ZNF541-201ENST00000263351 TAF1P21675 1872 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 XDHP47989 1333 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 VGLL3A8MV65 326 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 SEC23AQ15436 765 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 IL17AQ16552 155 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 FAM47AQ5JRC9 791 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 SPATA20Q8TB22 786 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 MTMR7Q9Y216 660 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 MYH3P11055 1940 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 TRIM75PA6NK02 468 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 CAPN2P17655 700 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 NPY5RQ15761 445 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 LONRF2Q1L5Z9 754 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 C3orf67Q6ZVT6 689 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 RASGRP4Q8TDF6 673 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 BTG4Q9NY30 223 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 MYH6P13533 1939 aa18.8■□□□□ 0.6
ZNF541-201ENST00000263351 TRIM49BA6NDI0 452 aa18.79■□□□□ 0.6
ZNF541-201ENST00000263351 CCDC175P0C221 793 aa18.79■□□□□ 0.6
ZNF541-201ENST00000263351 FCHSD1Q86WN1 690 aa18.79■□□□□ 0.6
ZNF541-201ENST00000263351 ZNF384Q8TF68 577 aa18.79■□□□□ 0.6
ZNF541-201ENST00000263351 GDAQ9Y2T3 454 aa18.79■□□□□ 0.6
ZNF541-201ENST00000263351 KCNQ4P56696 695 aa18.79■□□□□ 0.6
ZNF541-201ENST00000263351 PTGDRQ13258 359 aa18.79■□□□□ 0.6
ZNF541-201ENST00000263351 UBXN6Q9BZV1 441 aa18.79■□□□□ 0.6
ZNF541-201ENST00000263351 NUP98P52948 1817 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 MFAP3LO75121 409 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 KLRK1P26718 216 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 MCM7P33993 719 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 CHMP4BP1P59074 171 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 FUT2Q10981 343 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 SART3Q15020 963 aaKnown RBP18.78■□□□□ 0.6
ZNF541-201ENST00000263351 NCAPH2Q6IBW4 605 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 PPFIBP1Q86W92 1011 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 GPR161Q8N6U8 529 aaKnown RBP18.78■□□□□ 0.6
ZNF541-201ENST00000263351 ACSBG1Q96GR2 724 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 CHP1Q99653 195 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 SLF1Q9BQI6 1058 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 SRRTQ9BXP5 876 aaKnown RBP18.78■□□□□ 0.6
ZNF541-201ENST00000263351 CNNM2Q9H8M5 875 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 ARFGAP3Q9NP61 516 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 PP2D1A8MPX8 630 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 PHACTR2O75167 634 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 PBX1P40424 430 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 CHRNDQ07001 517 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 PIK3AP1Q6ZUJ8 805 aa18.78■□□□□ 0.6
ZNF541-201ENST00000263351 NOA1Q8NC60 698 aaKnown RBP18.78■□□□□ 0.6
ZNF541-201ENST00000263351 WASF1Q92558 559 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms