RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 BAZ2AQ9UIF9 1905 aaKnown RBP13.81□□□□□ -0.2
PFDN1-201ENST00000261813 UNCXA6NJT0 531 aa13.81□□□□□ -0.2
PFDN1-201ENST00000261813 CCDC85CA6NKD9 419 aa13.81□□□□□ -0.2
PFDN1-201ENST00000261813 APPP05067 770 aa13.81□□□□□ -0.2
PFDN1-201ENST00000261813 SLC10A3P09131 477 aa13.81□□□□□ -0.2
PFDN1-201ENST00000261813 ZNF157P51786 506 aaPredicted RBP13.81□□□□□ -0.2
PFDN1-201ENST00000261813 GABPAQ06546 454 aa13.81□□□□□ -0.2
PFDN1-201ENST00000261813 C12orf60Q5U649 245 aa13.81□□□□□ -0.2
PFDN1-201ENST00000261813 RASAL3Q86YV0 1011 aa13.81□□□□□ -0.2
PFDN1-201ENST00000261813 DDRGK1Q96HY6 314 aa13.81□□□□□ -0.2
PFDN1-201ENST00000261813 HS3ST6Q96QI5 342 aa13.81□□□□□ -0.2
PFDN1-201ENST00000261813 UPF2Q9HAU5 1272 aaKnown RBP13.81□□□□□ -0.2
PFDN1-201ENST00000261813 TSHZ2Q9NRE2 1034 aa13.81□□□□□ -0.2
PFDN1-201ENST00000261813 ARPP21Q9UBL0 812 aaPredicted RBP13.81□□□□□ -0.2
PFDN1-201ENST00000261813 SERPINB13Q9UIV8 391 aa13.81□□□□□ -0.2
PFDN1-201ENST00000261813 SNCAIPQ9Y6H5 919 aa13.81□□□□□ -0.2
PFDN1-201ENST00000261813 FAM205CA6NFA0 338 aa13.8□□□□□ -0.2
PFDN1-201ENST00000261813 FAM155AB1AL88 458 aaPredicted RBP13.8□□□□□ -0.2
PFDN1-201ENST00000261813 CA12O43570 354 aa13.8□□□□□ -0.2
PFDN1-201ENST00000261813 HSPD1P10809 573 aaKnown RBP13.8□□□□□ -0.2
PFDN1-201ENST00000261813 MAP2K2P36507 400 aa13.8□□□□□ -0.2
PFDN1-201ENST00000261813 TDO2P48775 406 aa13.8□□□□□ -0.2
PFDN1-201ENST00000261813 C8orf34Q49A92 452 aa13.8□□□□□ -0.2
PFDN1-201ENST00000261813 SBK1Q52WX2 424 aa13.8□□□□□ -0.2
PFDN1-201ENST00000261813 NOL9Q5SY16 702 aaKnown RBP13.8□□□□□ -0.2
PFDN1-201ENST00000261813 CRACR2BQ8N4Y2 399 aaPredicted RBP13.8□□□□□ -0.2
PFDN1-201ENST00000261813 RUFY2Q8WXA3 655 aa13.8□□□□□ -0.2
PFDN1-201ENST00000261813 DYNLL2Q96FJ2 89 aa13.8□□□□□ -0.2
PFDN1-201ENST00000261813 ELP3Q9H9T3 547 aa13.8□□□□□ -0.2
PFDN1-201ENST00000261813 RAD50Q92878 1312 aa13.79□□□□□ -0.2
PFDN1-201ENST00000261813 NUDT7P0C024 238 aa13.79□□□□□ -0.2
PFDN1-201ENST00000261813 SHMT1P34896 483 aa13.79□□□□□ -0.2
PFDN1-201ENST00000261813 MLLT1Q03111 559 aaPredicted RBP13.79□□□□□ -0.2
PFDN1-201ENST00000261813 SLC10A4Q96EP9 437 aa13.79□□□□□ -0.2
PFDN1-201ENST00000261813 TRIM34Q9BYJ4 488 aa13.79□□□□□ -0.2
PFDN1-201ENST00000261813 NACAP1Q9BZK3 213 aa13.79□□□□□ -0.2
PFDN1-201ENST00000261813 NAPBQ9H115 298 aa13.79□□□□□ -0.2
PFDN1-201ENST00000261813 CSADQ9Y600 493 aa13.79□□□□□ -0.2
PFDN1-201ENST00000261813 LAMB1P07942 1786 aa13.78□□□□□ -0.2
PFDN1-201ENST00000261813 THSD7BQ9C0I4 1608 aa13.78□□□□□ -0.2
PFDN1-201ENST00000261813 MINDY4BA8MYZ0 360 aa13.78□□□□□ -0.2
PFDN1-201ENST00000261813 CTNND1O60716 968 aaKnown RBP13.78□□□□□ -0.2
PFDN1-201ENST00000261813 AOC2O75106 756 aa13.78□□□□□ -0.2
PFDN1-201ENST00000261813 GJA5P36382 358 aa13.78□□□□□ -0.2
PFDN1-201ENST00000261813 MFAP1P55081 439 aaKnown RBP13.78□□□□□ -0.2
PFDN1-201ENST00000261813 JAG1P78504 1218 aa13.78□□□□□ -0.2
PFDN1-201ENST00000261813 ALX1Q15699 326 aa13.78□□□□□ -0.2
PFDN1-201ENST00000261813 SHROOM1Q2M3G4 852 aaPredicted RBP13.78□□□□□ -0.2
PFDN1-201ENST00000261813 TATDN1Q6P1N9 297 aa13.78□□□□□ -0.2
PFDN1-201ENST00000261813 AMOTL1Q8IY63 956 aa13.78□□□□□ -0.2
PFDN1-201ENST00000261813 SCYL3Q8IZE3 742 aa13.78□□□□□ -0.2
PFDN1-201ENST00000261813 SLC44A5Q8NCS7 719 aa13.78□□□□□ -0.2
PFDN1-201ENST00000261813 CCDC102AQ96A19 550 aa13.78□□□□□ -0.2
PFDN1-201ENST00000261813 ZIC5Q96T25 663 aa13.78□□□□□ -0.2
PFDN1-201ENST00000261813 EMILIN3Q9NT22 766 aa13.78□□□□□ -0.2
PFDN1-201ENST00000261813 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.78□□□□□ -0.2
PFDN1-201ENST00000261813 ROBO3Q96MS0 1386 aa13.77□□□□□ -0.2
PFDN1-201ENST00000261813 SPDYE5A6NIY4 337 aa13.77□□□□□ -0.21
PFDN1-201ENST00000261813 SGSM2O43147 1006 aa13.77□□□□□ -0.21
PFDN1-201ENST00000261813 GDF11O95390 407 aa13.77□□□□□ -0.21
PFDN1-201ENST00000261813 FGAP02671 866 aa13.77□□□□□ -0.21
PFDN1-201ENST00000261813 CAP2P40123 477 aa13.77□□□□□ -0.21
PFDN1-201ENST00000261813 SPRYD7Q5W111 196 aa13.77□□□□□ -0.21
PFDN1-201ENST00000261813 C16orf86Q6ZW13 317 aa13.77□□□□□ -0.21
PFDN1-201ENST00000261813 OPTNQ96CV9 577 aa13.77□□□□□ -0.21
PFDN1-201ENST00000261813 WNK4Q96J92 1243 aa13.77□□□□□ -0.21
PFDN1-201ENST00000261813 DOCK1Q14185 1865 aa13.76□□□□□ -0.21
PFDN1-201ENST00000261813 EPB41L2O43491 1005 aaKnown RBP13.76□□□□□ -0.21
PFDN1-201ENST00000261813 REC8O95072 547 aa13.76□□□□□ -0.21
PFDN1-201ENST00000261813 PTPRAP18433 802 aa13.76□□□□□ -0.21
PFDN1-201ENST00000261813 PPARAQ07869 468 aa13.76□□□□□ -0.21
PFDN1-201ENST00000261813 CCDC84Q86UT8 332 aaPredicted RBP13.76□□□□□ -0.21
PFDN1-201ENST00000261813 ERO1BQ86YB8 467 aa13.76□□□□□ -0.21
PFDN1-201ENST00000261813 STK11IPQ8N1F8 1099 aa13.76□□□□□ -0.21
PFDN1-201ENST00000261813 ESYT1Q9BSJ8 1104 aa13.76□□□□□ -0.21
PFDN1-201ENST00000261813 DSCC1Q9BVC3 393 aa13.76□□□□□ -0.21
PFDN1-201ENST00000261813 SWAP70Q9UH65 585 aa13.76□□□□□ -0.21
PFDN1-201ENST00000261813 ZMYM6O95789 1325 aa13.76□□□□□ -0.21
PFDN1-201ENST00000261813 ZBTB48P10074 688 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-201ENST00000261813 CDK8P49336 464 aa13.75□□□□□ -0.21
PFDN1-201ENST00000261813 PTH1RQ03431 593 aa13.75□□□□□ -0.21
PFDN1-201ENST00000261813 NOGQ13253 232 aa13.75□□□□□ -0.21
PFDN1-201ENST00000261813 ATAD5Q96QE3 1844 aa13.75□□□□□ -0.21
PFDN1-201ENST00000261813 RGS19P49795 217 aa13.74□□□□□ -0.21
PFDN1-201ENST00000261813 KIF23Q02241 960 aaPredicted RBP13.74□□□□□ -0.21
PFDN1-201ENST00000261813 CTDSPL2Q05D32 466 aa13.74□□□□□ -0.21
PFDN1-201ENST00000261813 PPATQ06203 517 aa13.74□□□□□ -0.21
PFDN1-201ENST00000261813 CERKLQ49MI3 558 aaPredicted RBP13.74□□□□□ -0.21
PFDN1-201ENST00000261813 PICK1Q9NRD5 415 aa13.74□□□□□ -0.21
PFDN1-201ENST00000261813 TSKSQ9UJT2 592 aa13.74□□□□□ -0.21
PFDN1-201ENST00000261813 ANAPC4Q9UJX5 808 aa13.74□□□□□ -0.21
PFDN1-201ENST00000261813 ZBTB21Q9ULJ3 1066 aa13.74□□□□□ -0.21
PFDN1-201ENST00000261813 TACC3Q9Y6A5 838 aa13.74□□□□□ -0.21
PFDN1-201ENST00000261813 IRF6O14896 467 aa13.73□□□□□ -0.21
PFDN1-201ENST00000261813 GH2P01242 217 aa13.73□□□□□ -0.21
PFDN1-201ENST00000261813 AKR1B1P15121 316 aa13.73□□□□□ -0.21
PFDN1-201ENST00000261813 HAND2P61296 217 aa13.73□□□□□ -0.21
PFDN1-201ENST00000261813 PPIL2Q13356 520 aa13.73□□□□□ -0.21
PFDN1-201ENST00000261813 VARS2Q5ST30 1063 aaKnown RBP13.73□□□□□ -0.21
PFDN1-201ENST00000261813 KIAA1211Q6ZU35 1233 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms