RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 CNKSR2Q8WXI2 1034 aa24.4■■□□□ 1.5
RTCA-201ENST00000260563 TM6SF1Q9BZW5 370 aa24.4■■□□□ 1.5
RTCA-201ENST00000260563 LOC285556D6RIA3 1793 aa24.39■■□□□ 1.49
RTCA-201ENST00000260563 ZBTB48P10074 688 aaPredicted RBP24.39■■□□□ 1.49
RTCA-201ENST00000260563 GUCY1A2P33402 732 aa24.39■■□□□ 1.49
RTCA-201ENST00000260563 PPIL2Q13356 520 aa24.39■■□□□ 1.49
RTCA-201ENST00000260563 CYP4F22Q6NT55 531 aa24.39■■□□□ 1.49
RTCA-201ENST00000260563 NEDD1Q8NHV4 660 aa24.39■■□□□ 1.49
RTCA-201ENST00000260563 CCDC102AQ96A19 550 aa24.39■■□□□ 1.49
RTCA-201ENST00000260563 ZHX2Q9Y6X8 837 aa24.39■■□□□ 1.49
RTCA-201ENST00000260563 THSD7BQ9C0I4 1608 aa24.38■■□□□ 1.49
RTCA-201ENST00000260563 KDM4AO75164 1064 aa24.38■■□□□ 1.49
RTCA-201ENST00000260563 CASTP20810 708 aaKnown RBP24.38■■□□□ 1.49
RTCA-201ENST00000260563 ICA1Q05084 483 aa24.38■■□□□ 1.49
RTCA-201ENST00000260563 GRM1Q13255 1194 aa24.38■■□□□ 1.49
RTCA-201ENST00000260563 NEK1Q96PY6 1258 aa24.38■■□□□ 1.49
RTCA-201ENST00000260563 ECE1P42892 770 aa24.37■■□□□ 1.49
RTCA-201ENST00000260563 SPRYD7Q5W111 196 aa24.37■■□□□ 1.49
RTCA-201ENST00000260563 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.37■■□□□ 1.49
RTCA-201ENST00000260563 ZSWIM6Q9HCJ5 1215 aa24.37■■□□□ 1.49
RTCA-201ENST00000260563 GJA5P36382 358 aa24.36■■□□□ 1.49
RTCA-201ENST00000260563 MKRN3Q13064 507 aaKnown RBP24.36■■□□□ 1.49
RTCA-201ENST00000260563 CLEC10AQ8IUN9 316 aa24.36■■□□□ 1.49
RTCA-201ENST00000260563 CAPNS2Q96L46 248 aa24.36■■□□□ 1.49
RTCA-201ENST00000260563 UPF3BQ9BZI7 483 aaKnown RBP24.36■■□□□ 1.49
RTCA-201ENST00000260563 KANSL2Q9H9L4 492 aa24.36■■□□□ 1.49
RTCA-201ENST00000260563 IGKV6D-41A0A0C4DH26 115 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 FAM155AB1AL88 458 aaPredicted RBP24.35■■□□□ 1.49
RTCA-201ENST00000260563 NEK4P51957 841 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 BLOC1S2Q6QNY1 142 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 IQCA1Q86XH1 822 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 ZNF280CQ8ND82 737 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 IL27Q8NEV9 243 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 NKX2-3Q8TAU0 364 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 CEP95Q96GE4 821 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 ARHGEF10LQ9HCE6 1279 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 AFG3L2Q9Y4W6 797 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 CYP46A1Q9Y6A2 500 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 TRIM75PA6NK02 468 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 IRF6O14896 467 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 PPP4R3BQ5MIZ7 849 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 RUFY3Q7L099 469 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 WDR18Q9BV38 432 aa24.35■■□□□ 1.49
RTCA-201ENST00000260563 ST18O60284 1047 aa24.34■■□□□ 1.49
RTCA-201ENST00000260563 HMGB1P09429 215 aaKnown RBP24.34■■□□□ 1.49
RTCA-201ENST00000260563 MB21D2Q8IYB1 491 aaPredicted RBP24.34■■□□□ 1.49
RTCA-201ENST00000260563 FEZ1Q99689 392 aa24.34■■□□□ 1.49
RTCA-201ENST00000260563 TCP11L1Q9NUJ3 509 aa24.34■■□□□ 1.49
RTCA-201ENST00000260563 ZSWIM5Q9P217 1185 aa24.34■■□□□ 1.49
RTCA-201ENST00000260563 NMT2O60551 498 aa24.33■■□□□ 1.49
RTCA-201ENST00000260563 CPA1P15085 419 aa24.33■■□□□ 1.49
RTCA-201ENST00000260563 ATP2B2Q01814 1243 aa24.33■■□□□ 1.49
RTCA-201ENST00000260563 SPP2Q13103 211 aa24.33■■□□□ 1.49
RTCA-201ENST00000260563 SH2D4AQ9H788 454 aa24.33■■□□□ 1.49
RTCA-201ENST00000260563 IL17RBQ9NRM6 502 aa24.33■■□□□ 1.49
RTCA-201ENST00000260563 MTMR4Q9NYA4 1195 aa24.33■■□□□ 1.49
RTCA-201ENST00000260563 KCNH4Q9UQ05 1017 aa24.33■■□□□ 1.49
RTCA-201ENST00000260563 USP17L10C9JJH3 530 aa24.32■■□□□ 1.48
RTCA-201ENST00000260563 TTLL1O95922 423 aa24.32■■□□□ 1.48
RTCA-201ENST00000260563 EEF2P13639 858 aaKnown RBP24.32■■□□□ 1.48
RTCA-201ENST00000260563 RPS6KB1P23443 525 aa24.32■■□□□ 1.48
RTCA-201ENST00000260563 GTF2A2P52657 109 aa24.32■■□□□ 1.48
RTCA-201ENST00000260563 NOGQ13253 232 aa24.32■■□□□ 1.48
RTCA-201ENST00000260563 SNAPC2Q13487 334 aa24.32■■□□□ 1.48
RTCA-201ENST00000260563 CYB5R4Q7L1T6 521 aa24.32■■□□□ 1.48
RTCA-201ENST00000260563 ZKSCAN3Q9BRR0 538 aa24.32■■□□□ 1.48
RTCA-201ENST00000260563 UBAC1Q9BSL1 405 aa24.32■■□□□ 1.48
RTCA-201ENST00000260563 STX8Q9UNK0 236 aa24.32■■□□□ 1.48
RTCA-201ENST00000260563 WDR33Q9C0J8 1336 aaKnown RBP24.32■■□□□ 1.48
RTCA-201ENST00000260563 CXCL11O14625 94 aa24.31■■□□□ 1.48
RTCA-201ENST00000260563 MCM5P33992 734 aa24.31■■□□□ 1.48
RTCA-201ENST00000260563 MTMR2Q13614 643 aa24.31■■□□□ 1.48
RTCA-201ENST00000260563 COL9A3Q14050 684 aaPredicted RBP24.31■■□□□ 1.48
RTCA-201ENST00000260563 CCDC178Q5BJE1 867 aa24.31■■□□□ 1.48
RTCA-201ENST00000260563 NYAP2Q9P242 653 aa24.31■■□□□ 1.48
RTCA-201ENST00000260563 TNKSO95271 1327 aa24.3■■□□□ 1.48
RTCA-201ENST00000260563 VEGFBP49765 207 aa24.3■■□□□ 1.48
RTCA-201ENST00000260563 BACE1P56817 501 aa24.3■■□□□ 1.48
RTCA-201ENST00000260563 ACER1Q8TDN7 264 aa24.3■■□□□ 1.48
RTCA-201ENST00000260563 SNX21Q969T3 373 aa24.3■■□□□ 1.48
RTCA-201ENST00000260563 ZSCAN10Q96SZ4 725 aaPredicted RBP24.3■■□□□ 1.48
RTCA-201ENST00000260563 PDRG1Q9NUG6 133 aa24.3■■□□□ 1.48
RTCA-201ENST00000260563 A0A0G2JLL6 359 aaPredicted RBP24.3■■□□□ 1.48
RTCA-201ENST00000260563 USP14P54578 494 aa24.3■■□□□ 1.48
RTCA-201ENST00000260563 SART3Q15020 963 aaKnown RBP24.3■■□□□ 1.48
RTCA-201ENST00000260563 DHX32Q7L7V1 743 aaKnown RBP24.3■■□□□ 1.48
RTCA-201ENST00000260563 PRRT2Q7Z6L0 340 aaPredicted RBP24.3■■□□□ 1.48
RTCA-201ENST00000260563 TTC14Q96N46 770 aa24.3■■□□□ 1.48
RTCA-201ENST00000260563 CLIP2Q9UDT6 1046 aa24.3■■□□□ 1.48
RTCA-201ENST00000260563 A0A1W2PRG0 241 aa24.29■■□□□ 1.48
RTCA-201ENST00000260563 ERICH2A1L162 156 aa24.29■■□□□ 1.48
RTCA-201ENST00000260563 MANSC4A6NHS7 340 aaPredicted RBP24.29■■□□□ 1.48
RTCA-201ENST00000260563 C19orf81C9J6K1 198 aa24.29■■□□□ 1.48
RTCA-201ENST00000260563 PRC1O43663 620 aa24.29■■□□□ 1.48
RTCA-201ENST00000260563 ANTXR2P58335 489 aa24.29■■□□□ 1.48
RTCA-201ENST00000260563 ZYXQ15942 572 aaKnown RBP24.29■■□□□ 1.48
RTCA-201ENST00000260563 CHST3Q7LGC8 479 aa24.29■■□□□ 1.48
RTCA-201ENST00000260563 SIAH1Q8IUQ4 282 aa24.29■■□□□ 1.48
RTCA-201ENST00000260563 KIAA1683Q9H0B3 1180 aa24.29■■□□□ 1.48
RTCA-201ENST00000260563 TMX2Q9Y320 296 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms