RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 ANGEL1Q9UNK9 670 aaKnown RBP16.72■□□□□ 0.27
MSI1-201ENST00000257552 LAMB4A4D0S4 1761 aa16.72■□□□□ 0.27
MSI1-201ENST00000257552 ZMYM6O95789 1325 aa16.72■□□□□ 0.27
MSI1-201ENST00000257552 CCT6AP40227 531 aaKnown RBP16.72■□□□□ 0.27
MSI1-201ENST00000257552 ZAP70P43403 619 aa16.72■□□□□ 0.27
MSI1-201ENST00000257552 MARCH10Q8NA82 808 aaPredicted RBP16.72■□□□□ 0.27
MSI1-201ENST00000257552 GBP3Q9H0R5 595 aa16.72■□□□□ 0.27
MSI1-201ENST00000257552 UBN2Q6ZU65 1347 aa16.71■□□□□ 0.27
MSI1-201ENST00000257552 RANBP6O60518 1105 aaKnown RBP16.71■□□□□ 0.27
MSI1-201ENST00000257552 MICALL1Q8N3F8 863 aa16.71■□□□□ 0.27
MSI1-201ENST00000257552 GPATCH11Q8N954 259 aa16.71■□□□□ 0.27
MSI1-201ENST00000257552 SLF1Q9BQI6 1058 aa16.71■□□□□ 0.27
MSI1-201ENST00000257552 B4E1Z4 1266 aa16.71■□□□□ 0.27
MSI1-201ENST00000257552 ENC1O14682 589 aa16.71■□□□□ 0.27
MSI1-201ENST00000257552 GPAA1O43292 621 aa16.71■□□□□ 0.27
MSI1-201ENST00000257552 CDKL5O76039 1030 aa16.71■□□□□ 0.27
MSI1-201ENST00000257552 FAM182BQ5T319 152 aa16.71■□□□□ 0.27
MSI1-201ENST00000257552 RASGRP2Q7LDG7 609 aa16.71■□□□□ 0.27
MSI1-201ENST00000257552 AFAP1L1Q8TED9 768 aa16.71■□□□□ 0.27
MSI1-201ENST00000257552 MFAP3LO75121 409 aa16.71■□□□□ 0.26
MSI1-201ENST00000257552 GUCY2CP25092 1073 aa16.71■□□□□ 0.26
MSI1-201ENST00000257552 APOA5Q6Q788 366 aa16.71■□□□□ 0.26
MSI1-201ENST00000257552 TRIM10Q9UDY6 481 aa16.71■□□□□ 0.26
MSI1-201ENST00000257552 UBR2Q8IWV8 1755 aa16.7■□□□□ 0.26
MSI1-201ENST00000257552 GUCY1A2P33402 732 aa16.7■□□□□ 0.26
MSI1-201ENST00000257552 PLCD1P51178 756 aa16.7■□□□□ 0.26
MSI1-201ENST00000257552 TBC1D10CQ8IV04 446 aa16.7■□□□□ 0.26
MSI1-201ENST00000257552 ACBD3Q9H3P7 528 aa16.7■□□□□ 0.26
MSI1-201ENST00000257552 HDAC6Q9UBN7 1215 aa16.7■□□□□ 0.26
MSI1-201ENST00000257552 GUCA1BQ9UMX6 200 aa16.7■□□□□ 0.26
MSI1-201ENST00000257552 LAMA4Q16363 1823 aa16.7■□□□□ 0.26
MSI1-201ENST00000257552 ROBO1Q9Y6N7 1651 aa16.7■□□□□ 0.26
MSI1-201ENST00000257552 NHSL1Q5SYE7 1610 aa16.7■□□□□ 0.26
MSI1-201ENST00000257552 GOLGA8AA7E2F4 631 aa16.7■□□□□ 0.26
MSI1-201ENST00000257552 CD44P16070 742 aaKnown RBP16.7■□□□□ 0.26
MSI1-201ENST00000257552 SARSP49591 514 aaKnown RBP16.7■□□□□ 0.26
MSI1-201ENST00000257552 TOB1P50616 345 aaPredicted RBP16.7■□□□□ 0.26
MSI1-201ENST00000257552 CTSWP56202 376 aa16.7■□□□□ 0.26
MSI1-201ENST00000257552 FAM98CQ17RN3 349 aaKnown RBP16.7■□□□□ 0.26
MSI1-201ENST00000257552 DEF6Q9H4E7 631 aa16.7■□□□□ 0.26
MSI1-201ENST00000257552 MYO6Q9UM54 1294 aa16.7■□□□□ 0.26
MSI1-201ENST00000257552 ZBTB43O43298 467 aa16.69■□□□□ 0.26
MSI1-201ENST00000257552 PPFIA4O75335 1185 aa16.69■□□□□ 0.26
MSI1-201ENST00000257552 SYF2O95926 243 aaKnown RBP16.69■□□□□ 0.26
MSI1-201ENST00000257552 APTXQ7Z2E3 356 aaKnown RBP16.69■□□□□ 0.26
MSI1-201ENST00000257552 NOSTRINQ8IVI9 506 aa16.69■□□□□ 0.26
MSI1-201ENST00000257552 GSPT2Q8IYD1 628 aaKnown RBP16.69■□□□□ 0.26
MSI1-201ENST00000257552 CMTR1Q8N1G2 835 aaKnown RBP16.69■□□□□ 0.26
MSI1-201ENST00000257552 NBPF3Q9H094 633 aa16.69■□□□□ 0.26
MSI1-201ENST00000257552 MED4Q9NPJ6 270 aa16.69■□□□□ 0.26
MSI1-201ENST00000257552 PCDHB6Q9Y5E3 794 aa16.69■□□□□ 0.26
MSI1-201ENST00000257552 GYPCP04921 128 aa16.69■□□□□ 0.26
MSI1-201ENST00000257552 CRKLP46109 303 aaKnown RBP16.69■□□□□ 0.26
MSI1-201ENST00000257552 ERVK-24P63145 666 aa16.69■□□□□ 0.26
MSI1-201ENST00000257552 TRIM28Q13263 835 aaKnown RBP16.69■□□□□ 0.26
MSI1-201ENST00000257552 WHAMMP3Q1A5X7 153 aa16.69■□□□□ 0.26
MSI1-201ENST00000257552 DNAJC21Q5F1R6 531 aaKnown RBP16.69■□□□□ 0.26
MSI1-201ENST00000257552 DIS3L2Q8IYB7 885 aaKnown RBP16.69■□□□□ 0.26
MSI1-201ENST00000257552 NAA15Q9BXJ9 866 aaKnown RBP16.69■□□□□ 0.26
MSI1-201ENST00000257552 FBXO2Q9UK22 296 aaPredicted RBP16.69■□□□□ 0.26
MSI1-201ENST00000257552 TFR2Q9UP52 801 aa16.69■□□□□ 0.26
MSI1-201ENST00000257552 ANKRD18BA2A2Z9 1011 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 RNF225M0QZC1 329 aaPredicted RBP16.68■□□□□ 0.26
MSI1-201ENST00000257552 SRGAP2O75044 1071 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 CIAO1O76071 339 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 NR5A1Q13285 461 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 ITPK1Q13572 414 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.68■□□□□ 0.26
MSI1-201ENST00000257552 CCDC148Q8NFR7 591 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 STAMQ92783 540 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 SMARCC1Q92922 1105 aaPredicted RBP16.68■□□□□ 0.26
MSI1-201ENST00000257552 CAPZA3Q96KX2 299 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 ADD3Q9UEY8 706 aaKnown RBP16.68■□□□□ 0.26
MSI1-201ENST00000257552 SPATA31A1Q5TZJ5 1347 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 DISP2A7MBM2 1401 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 SH2B2O14492 632 aaPredicted RBP16.68■□□□□ 0.26
MSI1-201ENST00000257552 CSF1RP07333 972 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 PTF1AQ7RTS3 328 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 C8orf37Q96NL8 207 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 TTF2Q9UNY4 1162 aaKnown RBP16.68■□□□□ 0.26
MSI1-201ENST00000257552 LOC102724428A0A0B4J2F2 783 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 PTPREP23469 700 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 LIG3P49916 1009 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 SIK1P57059 783 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 FILIP1LQ4L180 1135 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 SUSD4Q5VX71 490 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 APPBP2Q92624 585 aa16.68■□□□□ 0.26
MSI1-201ENST00000257552 NUP88Q99567 741 aaPredicted RBP16.68■□□□□ 0.26
MSI1-201ENST00000257552 SYNRGQ9UMZ2 1314 aa16.67■□□□□ 0.26
MSI1-201ENST00000257552 NT5DC1Q5TFE4 455 aa16.67■□□□□ 0.26
MSI1-201ENST00000257552 SPATA1Q5VX52 437 aa16.67■□□□□ 0.26
MSI1-201ENST00000257552 CSRNP2Q9H175 543 aa16.67■□□□□ 0.26
MSI1-201ENST00000257552 VPS16Q9H269 839 aa16.67■□□□□ 0.26
MSI1-201ENST00000257552 YY1AP1Q9H869 796 aa16.67■□□□□ 0.26
MSI1-201ENST00000257552 WWC3Q9ULE0 1092 aa16.67■□□□□ 0.26
MSI1-201ENST00000257552 TJP1Q07157 1748 aa16.67■□□□□ 0.26
MSI1-201ENST00000257552 ACTN4O43707 911 aaKnown RBP16.67■□□□□ 0.26
MSI1-201ENST00000257552 IDH1O75874 414 aaKnown RBP16.67■□□□□ 0.26
MSI1-201ENST00000257552 ARHGAP25P42331 645 aa16.67■□□□□ 0.26
MSI1-201ENST00000257552 SSRP1Q08945 709 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms