RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 C17orf53Q8N3J3 647 aaPredicted RBP28.95■■■□□ 2.23
TMEM55B-201ENST00000250489 SRBD1Q8N5C6 995 aaKnown RBP28.95■■■□□ 2.23
TMEM55B-201ENST00000250489 NOL10Q9BSC4 688 aaKnown RBP28.95■■■□□ 2.23
TMEM55B-201ENST00000250489 NRBP1Q9UHY1 535 aa28.95■■■□□ 2.23
TMEM55B-201ENST00000250489 R3HCC1Q9Y3T6 440 aaKnown RBP28.95■■■□□ 2.23
TMEM55B-201ENST00000250489 NAV1Q8NEY1 1877 aa28.95■■■□□ 2.23
TMEM55B-201ENST00000250489 TERF1P54274 439 aa28.95■■■□□ 2.22
TMEM55B-201ENST00000250489 RTFDC1Q9BY42 306 aaPredicted RBP28.95■■■□□ 2.22
TMEM55B-201ENST00000250489 PODXL2Q9NZ53 605 aa28.95■■■□□ 2.22
TMEM55B-201ENST00000250489 CEP131Q9UPN4 1083 aa28.95■■■□□ 2.22
TMEM55B-201ENST00000250489 KRBA2Q6ZNG9 492 aa28.93■■■□□ 2.22
TMEM55B-201ENST00000250489 CRAMP1Q96RY5 1269 aa28.93■■■□□ 2.22
TMEM55B-201ENST00000250489 TFAP4Q01664 338 aa28.93■■■□□ 2.22
TMEM55B-201ENST00000250489 GRIN1Q05586 938 aa28.93■■■□□ 2.22
TMEM55B-201ENST00000250489 LONRF3Q496Y0 759 aa28.93■■■□□ 2.22
TMEM55B-201ENST00000250489 DYNLL2Q96FJ2 89 aa28.93■■■□□ 2.22
TMEM55B-201ENST00000250489 KLRG2A4D1S0 409 aaPredicted RBP28.92■■■□□ 2.22
TMEM55B-201ENST00000250489 FAM205CA6NFA0 338 aa28.92■■■□□ 2.22
TMEM55B-201ENST00000250489 ZNF579Q8NAF0 562 aaKnown RBP28.92■■■□□ 2.22
TMEM55B-201ENST00000250489 TGFBRAP1Q8WUH2 860 aa28.92■■■□□ 2.22
TMEM55B-201ENST00000250489 SRPRBQ9Y5M8 271 aaKnown RBP28.92■■■□□ 2.22
TMEM55B-201ENST00000250489 MORC2Q9Y6X9 1032 aaPredicted RBP28.92■■■□□ 2.22
TMEM55B-201ENST00000250489 METTL16Q86W50 562 aaKnown RBP28.92■■■□□ 2.22
TMEM55B-201ENST00000250489 DGKHQ86XP1 1220 aa28.92■■■□□ 2.22
TMEM55B-201ENST00000250489 AMOTL1Q8IY63 956 aa28.92■■■□□ 2.22
TMEM55B-201ENST00000250489 TBC1D16Q8TBP0 767 aa28.92■■■□□ 2.22
TMEM55B-201ENST00000250489 IL17RBQ9NRM6 502 aa28.92■■■□□ 2.22
TMEM55B-201ENST00000250489 FAM13BQ9NYF5 915 aa28.92■■■□□ 2.22
TMEM55B-201ENST00000250489 TPM2P07951 284 aa28.91■■■□□ 2.22
TMEM55B-201ENST00000250489 ATP2B1P20020 1258 aa28.91■■■□□ 2.22
TMEM55B-201ENST00000250489 PNOCQ13519 176 aa28.91■■■□□ 2.22
TMEM55B-201ENST00000250489 NPY5RQ15761 445 aa28.91■■■□□ 2.22
TMEM55B-201ENST00000250489 EARS2Q5JPH6 523 aaKnown RBP28.91■■■□□ 2.22
TMEM55B-201ENST00000250489 SPECC1Q5M775 1068 aa28.91■■■□□ 2.22
TMEM55B-201ENST00000250489 CERS3Q8IU89 383 aa28.91■■■□□ 2.22
TMEM55B-201ENST00000250489 ELOA2Q8IYF1 753 aaPredicted RBP28.91■■■□□ 2.22
TMEM55B-201ENST00000250489 CNNM3Q8NE01 707 aa28.91■■■□□ 2.22
TMEM55B-201ENST00000250489 ANKS1AQ92625 1134 aa28.91■■■□□ 2.22
TMEM55B-201ENST00000250489 ANO8Q9HCE9 1232 aaPredicted RBP28.91■■■□□ 2.22
TMEM55B-201ENST00000250489 POLLQ9UGP5 575 aa28.91■■■□□ 2.22
TMEM55B-201ENST00000250489 LRRC37AA6NMS7 1700 aa28.91■■■□□ 2.22
TMEM55B-201ENST00000250489 TXNRD1Q16881 649 aa28.9■■■□□ 2.22
TMEM55B-201ENST00000250489 PROM2Q8N271 834 aa28.9■■■□□ 2.22
TMEM55B-201ENST00000250489 TNFRSF25Q93038 417 aa28.9■■■□□ 2.22
TMEM55B-201ENST00000250489 KAT14Q9H8E8 782 aa28.9■■■□□ 2.22
TMEM55B-201ENST00000250489 BRMS1Q9HCU9 246 aa28.9■■■□□ 2.22
TMEM55B-201ENST00000250489 LTBP1Q14766 1721 aa28.9■■■□□ 2.22
TMEM55B-201ENST00000250489 TRIM75PA6NK02 468 aa28.9■■■□□ 2.22
TMEM55B-201ENST00000250489 BTDP43251 543 aa28.9■■■□□ 2.22
TMEM55B-201ENST00000250489 CCDC144BQ3MJ40 725 aa28.9■■■□□ 2.22
TMEM55B-201ENST00000250489 KIF5BP33176 963 aa28.89■■■□□ 2.22
TMEM55B-201ENST00000250489 MKNK2Q9HBH9 465 aa28.89■■■□□ 2.22
TMEM55B-201ENST00000250489 CDK5RAP2Q96SN8 1893 aa28.89■■■□□ 2.21
TMEM55B-201ENST00000250489 GPR75-ASB3A0A0A6YYF3 556 aa28.88■■■□□ 2.21
TMEM55B-201ENST00000250489 SCG2P13521 617 aa28.88■■■□□ 2.21
TMEM55B-201ENST00000250489 MAPKAPK5Q8IW41 473 aa28.88■■■□□ 2.21
TMEM55B-201ENST00000250489 NCAPHQ15003 741 aa28.88■■■□□ 2.21
TMEM55B-201ENST00000250489 PLCD1P51178 756 aa28.87■■■□□ 2.21
TMEM55B-201ENST00000250489 LRMPQ12912 555 aa28.87■■■□□ 2.21
TMEM55B-201ENST00000250489 PFKFB3Q16875 520 aaPredicted RBP28.87■■■□□ 2.21
TMEM55B-201ENST00000250489 CCDC178Q5BJE1 867 aa28.87■■■□□ 2.21
TMEM55B-201ENST00000250489 ISM2Q6H9L7 571 aa28.87■■■□□ 2.21
TMEM55B-201ENST00000250489 TCP11L1Q9NUJ3 509 aa28.87■■■□□ 2.21
TMEM55B-201ENST00000250489 SMTNL1A8MU46 457 aa28.86■■■□□ 2.21
TMEM55B-201ENST00000250489 MDM2Q00987 491 aaPredicted RBP28.86■■■□□ 2.21
TMEM55B-201ENST00000250489 DDX60LQ5H9U9 1706 aaKnown RBP28.86■■■□□ 2.21
TMEM55B-201ENST00000250489 TMC4Q7Z404 712 aa28.86■■■□□ 2.21
TMEM55B-201ENST00000250489 FOXP4Q8IVH2 680 aaPredicted RBP28.86■■■□□ 2.21
TMEM55B-201ENST00000250489 PNMA1Q8ND90 353 aa28.86■■■□□ 2.21
TMEM55B-201ENST00000250489 SAP30BPQ9UHR5 308 aaKnown RBP28.86■■■□□ 2.21
TMEM55B-201ENST00000250489 MFSD14BQ5SR56 506 aa28.86■■■□□ 2.21
TMEM55B-201ENST00000250489 SLC44A5Q8NCS7 719 aa28.86■■■□□ 2.21
TMEM55B-201ENST00000250489 CSRNP2Q9H175 543 aa28.86■■■□□ 2.21
TMEM55B-201ENST00000250489 IKBKBO14920 756 aa28.85■■■□□ 2.21
TMEM55B-201ENST00000250489 TBC1D22AQ8WUA7 517 aa28.85■■■□□ 2.21
TMEM55B-201ENST00000250489 CACTINQ8WUQ7 758 aaKnown RBP28.85■■■□□ 2.21
TMEM55B-201ENST00000250489 FAM163AQ96GL9 167 aaPredicted RBP28.85■■■□□ 2.21
TMEM55B-201ENST00000250489 ANKRD31Q8N7Z5 1873 aa28.85■■■□□ 2.21
TMEM55B-201ENST00000250489 USP17L3A6NCW0 530 aa28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 USP17L4A6NCW7 530 aa28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 C6orf229H3BNL8 230 aa28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 PPEF1O14829 653 aaPredicted RBP28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 TSPY3P0CV98 308 aa28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 TSPY8P0CW00 308 aa28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 TPM4P67936 248 aa28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 DNTTIP2Q5QJE6 756 aaKnown RBP28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 USP17L1Q7RTZ2 530 aa28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 SP8Q8IXZ3 490 aa28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 TEX11Q8IYF3 940 aa28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 ZNF444Q8N0Y2 327 aaPredicted RBP28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 HOOK1Q9UJC3 728 aaKnown RBP28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 PCDHA5Q9Y5H7 936 aa28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 FOXN1O15353 648 aa28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 POLR2DO15514 142 aaKnown RBP28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 BMP15O95972 392 aa28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 PLCG2P16885 1265 aa28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 HMGB2P26583 209 aaKnown RBP28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 GRM4Q14833 912 aa28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 NOM1Q5C9Z4 860 aaKnown RBP28.84■■■□□ 2.21
TMEM55B-201ENST00000250489 FAM205AQ6ZU69 1335 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms