RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 STRBPQ96SI9 672 aaKnown RBP25.38■■□□□ 1.65
HCFC1R1-201ENST00000248089 EMILIN3Q9NT22 766 aa25.38■■□□□ 1.65
HCFC1R1-201ENST00000248089 KIAA0100Q14667 2235 aaKnown RBP25.37■■□□□ 1.65
HCFC1R1-201ENST00000248089 M0R2C6 588 aa25.37■■□□□ 1.65
HCFC1R1-201ENST00000248089 TNPO2O14787 897 aaKnown RBP25.37■■□□□ 1.65
HCFC1R1-201ENST00000248089 GPAA1O43292 621 aa25.37■■□□□ 1.65
HCFC1R1-201ENST00000248089 GUCY1A2P33402 732 aa25.37■■□□□ 1.65
HCFC1R1-201ENST00000248089 RWDD1Q9H446 243 aaPredicted RBP25.37■■□□□ 1.65
HCFC1R1-201ENST00000248089 BRCA2P51587 3418 aa25.37■■□□□ 1.65
HCFC1R1-201ENST00000248089 HOXA7P31268 230 aaPredicted RBP25.36■■□□□ 1.65
HCFC1R1-201ENST00000248089 USP14P54578 494 aa25.36■■□□□ 1.65
HCFC1R1-201ENST00000248089 B4GALNT3Q6L9W6 998 aa25.36■■□□□ 1.65
HCFC1R1-201ENST00000248089 CTR9Q6PD62 1173 aa25.36■■□□□ 1.65
HCFC1R1-201ENST00000248089 LNPKQ9C0E8 428 aa25.36■■□□□ 1.65
HCFC1R1-201ENST00000248089 ARPP21Q9UBL0 812 aaPredicted RBP25.36■■□□□ 1.65
HCFC1R1-201ENST00000248089 POTEFA5A3E0 1075 aa25.35■■□□□ 1.65
HCFC1R1-201ENST00000248089 CDK8P49336 464 aa25.35■■□□□ 1.65
HCFC1R1-201ENST00000248089 P2RX7Q99572 595 aaKnown RBP25.35■■□□□ 1.65
HCFC1R1-201ENST00000248089 KIAA1683Q9H0B3 1180 aa25.35■■□□□ 1.65
HCFC1R1-201ENST00000248089 GABRQQ9UN88 632 aa25.35■■□□□ 1.65
HCFC1R1-201ENST00000248089 AKR1B1P15121 316 aa25.34■■□□□ 1.65
HCFC1R1-201ENST00000248089 HERVK_113P62684 666 aa25.34■■□□□ 1.65
HCFC1R1-201ENST00000248089 TMEM179Q6ZVK1 233 aa25.34■■□□□ 1.65
HCFC1R1-201ENST00000248089 C16orf86Q6ZW13 317 aa25.34■■□□□ 1.65
HCFC1R1-201ENST00000248089 C12orf42Q96LP6 360 aa25.34■■□□□ 1.65
HCFC1R1-201ENST00000248089 TMEM106CQ9BVX2 250 aa25.34■■□□□ 1.65
HCFC1R1-201ENST00000248089 TAOK2Q9UL54 1235 aa25.34■■□□□ 1.65
HCFC1R1-201ENST00000248089 GSG1L2A8MUP6 293 aa25.33■■□□□ 1.65
HCFC1R1-201ENST00000248089 APPP05067 770 aa25.33■■□□□ 1.65
HCFC1R1-201ENST00000248089 VCAM1P19320 739 aa25.33■■□□□ 1.65
HCFC1R1-201ENST00000248089 TDO2P48775 406 aa25.33■■□□□ 1.65
HCFC1R1-201ENST00000248089 PDE1AP54750 535 aa25.33■■□□□ 1.65
HCFC1R1-201ENST00000248089 CLEC10AQ8IUN9 316 aa25.33■■□□□ 1.65
HCFC1R1-201ENST00000248089 STK11IPQ8N1F8 1099 aa25.33■■□□□ 1.65
HCFC1R1-201ENST00000248089 COA7Q96BR5 231 aa25.33■■□□□ 1.65
HCFC1R1-201ENST00000248089 SEC62Q99442 399 aaKnown RBP25.33■■□□□ 1.65
HCFC1R1-201ENST00000248089 MINDY4BA8MYZ0 360 aa25.32■■□□□ 1.64
HCFC1R1-201ENST00000248089 PEX10O60683 326 aa25.32■■□□□ 1.64
HCFC1R1-201ENST00000248089 GNAT2P19087 354 aa25.32■■□□□ 1.64
HCFC1R1-201ENST00000248089 GRK4P32298 578 aa25.32■■□□□ 1.64
HCFC1R1-201ENST00000248089 SMC5Q8IY18 1101 aa25.32■■□□□ 1.64
HCFC1R1-201ENST00000248089 PAGR1Q9BTK6 254 aa25.32■■□□□ 1.64
HCFC1R1-201ENST00000248089 STAP2Q9UGK3 403 aa25.32■■□□□ 1.64
HCFC1R1-201ENST00000248089 IGHDP01880 384 aa25.31■■□□□ 1.64
HCFC1R1-201ENST00000248089 FLT3LGP49771 235 aa25.31■■□□□ 1.64
HCFC1R1-201ENST00000248089 ICA1Q05084 483 aa25.31■■□□□ 1.64
HCFC1R1-201ENST00000248089 GIMAP6Q6P9H5 292 aa25.31■■□□□ 1.64
HCFC1R1-201ENST00000248089 CCDC17Q96LX7 622 aa25.31■■□□□ 1.64
HCFC1R1-201ENST00000248089 EPB41L4AQ9HCS5 686 aaPredicted RBP25.31■■□□□ 1.64
HCFC1R1-201ENST00000248089 MORF4L1Q9UBU8 362 aa25.31■■□□□ 1.64
HCFC1R1-201ENST00000248089 BIN2Q9UBW5 565 aaPredicted RBP25.31■■□□□ 1.64
HCFC1R1-201ENST00000248089 A0A1W2PRG0 241 aa25.3■■□□□ 1.64
HCFC1R1-201ENST00000248089 USP17L15C9J2P7 530 aa25.3■■□□□ 1.64
HCFC1R1-201ENST00000248089 USP17L13C9JLJ4 530 aa25.3■■□□□ 1.64
HCFC1R1-201ENST00000248089 USP17L11C9JVI0 530 aa25.3■■□□□ 1.64
HCFC1R1-201ENST00000248089 USP17L18D6R9N7 530 aa25.3■■□□□ 1.64
HCFC1R1-201ENST00000248089 USP17L22D6RA61 530 aa25.3■■□□□ 1.64
HCFC1R1-201ENST00000248089 USP17L17D6RBQ6 530 aa25.3■■□□□ 1.64
HCFC1R1-201ENST00000248089 USP17L19D6RCP7 530 aa25.3■■□□□ 1.64
HCFC1R1-201ENST00000248089 USP17L20D6RJB6 530 aa25.3■■□□□ 1.64
HCFC1R1-201ENST00000248089 IRX6P78412 446 aaPredicted RBP25.3■■□□□ 1.64
HCFC1R1-201ENST00000248089 USP17L24Q0WX57 530 aa25.3■■□□□ 1.64
HCFC1R1-201ENST00000248089 ZMYM1Q5SVZ6 1142 aa25.3■■□□□ 1.64
HCFC1R1-201ENST00000248089 RPAP3Q9H6T3 665 aaPredicted RBP25.3■■□□□ 1.64
HCFC1R1-201ENST00000248089 TXNRD2Q9NNW7 524 aa25.3■■□□□ 1.64
HCFC1R1-201ENST00000248089 PLXNB2O15031 1838 aa25.3■■□□□ 1.64
HCFC1R1-201ENST00000248089 GREB1LQ9C091 1923 aaPredicted RBP25.29■■□□□ 1.64
HCFC1R1-201ENST00000248089 SBK1Q52WX2 424 aa25.29■■□□□ 1.64
HCFC1R1-201ENST00000248089 GPRC5AQ8NFJ5 357 aa25.29■■□□□ 1.64
HCFC1R1-201ENST00000248089 EVI5LQ96CN4 794 aa25.29■■□□□ 1.64
HCFC1R1-201ENST00000248089 ARHGEF10LQ9HCE6 1279 aa25.29■■□□□ 1.64
HCFC1R1-201ENST00000248089 PDE4DIPQ5VU43 2346 aa25.29■■□□□ 1.64
HCFC1R1-201ENST00000248089 ADCY3O60266 1144 aa25.28■■□□□ 1.64
HCFC1R1-201ENST00000248089 EN2P19622 333 aaPredicted RBP25.28■■□□□ 1.64
HCFC1R1-201ENST00000248089 ATP2B2Q01814 1243 aa25.28■■□□□ 1.64
HCFC1R1-201ENST00000248089 CHD1LQ86WJ1 897 aa25.28■■□□□ 1.64
HCFC1R1-201ENST00000248089 SLAIN1Q8ND83 568 aa25.28■■□□□ 1.64
HCFC1R1-201ENST00000248089 GTF3C2Q8WUA4 911 aaPredicted RBP25.28■■□□□ 1.64
HCFC1R1-201ENST00000248089 ROBO3Q96MS0 1386 aa25.28■■□□□ 1.64
HCFC1R1-201ENST00000248089 ELNP15502 786 aa25.27■■□□□ 1.64
HCFC1R1-201ENST00000248089 ERVK-9P63128 1117 aa25.27■■□□□ 1.64
HCFC1R1-201ENST00000248089 ERVK-24P63145 666 aa25.27■■□□□ 1.64
HCFC1R1-201ENST00000248089 MTFR1Q15390 333 aa25.27■■□□□ 1.64
HCFC1R1-201ENST00000248089 CATSPERGQ6ZRH7 1159 aa25.27■■□□□ 1.64
HCFC1R1-201ENST00000248089 CCAR1Q8IX12 1150 aaKnown RBP25.27■■□□□ 1.64
HCFC1R1-201ENST00000248089 NACAP1Q9BZK3 213 aa25.27■■□□□ 1.64
HCFC1R1-201ENST00000248089 TANGO6Q9C0B7 1094 aa25.27■■□□□ 1.64
HCFC1R1-201ENST00000248089 SH2D4AQ9H788 454 aa25.27■■□□□ 1.64
HCFC1R1-201ENST00000248089 RBPJLQ9UBG7 517 aa25.27■■□□□ 1.64
HCFC1R1-201ENST00000248089 MYH4Q9Y623 1939 aa25.27■■□□□ 1.64
HCFC1R1-201ENST00000248089 PARP14Q460N5 1801 aa25.26■■□□□ 1.63
HCFC1R1-201ENST00000248089 PATL2C9JE40 543 aaKnown RBP25.26■■□□□ 1.63
HCFC1R1-201ENST00000248089 CCDC129Q6ZRS4 1044 aa25.26■■□□□ 1.63
HCFC1R1-201ENST00000248089 IFNL3Q8IZI9 196 aa25.26■■□□□ 1.63
HCFC1R1-201ENST00000248089 MKNK2Q9HBH9 465 aa25.26■■□□□ 1.63
HCFC1R1-201ENST00000248089 MKI67P46013 3256 aaKnown RBP25.26■■□□□ 1.63
HCFC1R1-201ENST00000248089 TRIM6-TRIM34B2RNG4 842 aa25.25■■□□□ 1.63
HCFC1R1-201ENST00000248089 UBXN2AP68543 259 aa25.25■■□□□ 1.63
HCFC1R1-201ENST00000248089 NUCB1Q02818 461 aa25.25■■□□□ 1.63
HCFC1R1-201ENST00000248089 IRF5Q13568 498 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms