RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 GRAMD1CQ8IYS0 662 aa24.72■■□□□ 1.55
SH2D3A-201ENST00000245908 PDILTQ8N807 584 aa24.72■■□□□ 1.55
SH2D3A-201ENST00000245908 OGFRQ9NZT2 677 aa24.72■■□□□ 1.55
SH2D3A-201ENST00000245908 LAMB1P07942 1786 aa24.72■■□□□ 1.55
SH2D3A-201ENST00000245908 SEMA3EO15041 775 aa24.72■■□□□ 1.55
SH2D3A-201ENST00000245908 PLEKHA8P1O95397 391 aa24.72■■□□□ 1.55
SH2D3A-201ENST00000245908 CTR9Q6PD62 1173 aa24.72■■□□□ 1.55
SH2D3A-201ENST00000245908 MYH13Q9UKX3 1938 aa24.71■■□□□ 1.55
SH2D3A-201ENST00000245908 DDAH1O94760 285 aa24.71■■□□□ 1.55
SH2D3A-201ENST00000245908 CCDC93Q567U6 631 aa24.71■■□□□ 1.55
SH2D3A-201ENST00000245908 FBXO33Q7Z6M2 555 aa24.71■■□□□ 1.55
SH2D3A-201ENST00000245908 BMP15O95972 392 aa24.7■■□□□ 1.55
SH2D3A-201ENST00000245908 ZNF827Q17R98 1081 aa24.7■■□□□ 1.55
SH2D3A-201ENST00000245908 EARS2Q5JPH6 523 aaKnown RBP24.7■■□□□ 1.55
SH2D3A-201ENST00000245908 TMEM139Q8IV31 216 aa24.7■■□□□ 1.55
SH2D3A-201ENST00000245908 ZNF397Q8NF99 534 aaPredicted RBP24.7■■□□□ 1.55
SH2D3A-201ENST00000245908 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.7■■□□□ 1.55
SH2D3A-201ENST00000245908 V9GY48 417 aaPredicted RBP24.7■■□□□ 1.55
SH2D3A-201ENST00000245908 PDS5AQ29RF7 1337 aaKnown RBP24.7■■□□□ 1.54
SH2D3A-201ENST00000245908 PHLPP2Q6ZVD8 1323 aa24.7■■□□□ 1.54
SH2D3A-201ENST00000245908 PLCD1P51178 756 aa24.7■■□□□ 1.54
SH2D3A-201ENST00000245908 ETF1P62495 437 aaKnown RBP24.7■■□□□ 1.54
SH2D3A-201ENST00000245908 SLC10A5Q5PT55 438 aa24.7■■□□□ 1.54
SH2D3A-201ENST00000245908 BARGINQ6ZT62 677 aa24.7■■□□□ 1.54
SH2D3A-201ENST00000245908 TMTC3Q6ZXV5 915 aa24.7■■□□□ 1.54
SH2D3A-201ENST00000245908 RGL2O15211 777 aa24.69■■□□□ 1.54
SH2D3A-201ENST00000245908 PRDM1O75626 825 aa24.69■■□□□ 1.54
SH2D3A-201ENST00000245908 ERCC5P28715 1186 aaPredicted RBP24.69■■□□□ 1.54
SH2D3A-201ENST00000245908 LINC00116Q8NCU8 138 aa24.69■■□□□ 1.54
SH2D3A-201ENST00000245908 CELF1Q92879 486 aaKnown RBP24.69■■□□□ 1.54
SH2D3A-201ENST00000245908 TNFRSF25Q93038 417 aa24.69■■□□□ 1.54
SH2D3A-201ENST00000245908 CCDC34Q96HJ3 373 aa24.69■■□□□ 1.54
SH2D3A-201ENST00000245908 MED15Q96RN5 788 aa24.69■■□□□ 1.54
SH2D3A-201ENST00000245908 ORC4O43929 436 aa24.69■■□□□ 1.54
SH2D3A-201ENST00000245908 CT47A1Q5JQC4 288 aaPredicted RBP24.69■■□□□ 1.54
SH2D3A-201ENST00000245908 NUTM2AQ8IVF1 878 aaPredicted RBP24.69■■□□□ 1.54
SH2D3A-201ENST00000245908 FERMT2Q96AC1 680 aa24.69■■□□□ 1.54
SH2D3A-201ENST00000245908 NSUN4Q96CB9 384 aaKnown RBP24.69■■□□□ 1.54
SH2D3A-201ENST00000245908 ARHGAP6O43182 974 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 KCNQ2O43526 872 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 GABPB1Q06547 395 aaPredicted RBP24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 GOLGA8FQ08AF8 430 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 GOLGA8DPQ0D2H9 430 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 SH3RF1Q7Z6J0 888 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 HOMER1Q86YM7 354 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 REXO1L1PQ8IX06 675 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 TRMT44Q8IYL2 757 aaKnown RBP24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 BRMS1Q9HCU9 246 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 V9GYY5 206 aaPredicted RBP24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 CNTNAP5Q8WYK1 1306 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 MAST2Q6P0Q8 1798 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 A0A087X0B3 334 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 hCG_1642624A0A1W2PR95 340 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 USP17L12C9JPN9 530 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 USP17L21D6R901 530 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 CDK11BP21127 795 aaKnown RBP24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 ELF2Q15723 593 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 NPY5RQ15761 445 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 PTPN21Q16825 1174 aa24.68■■□□□ 1.54
SH2D3A-201ENST00000245908 SLFN14P0C7P3 912 aa24.67■■□□□ 1.54
SH2D3A-201ENST00000245908 HSP90AA4PQ58FG1 418 aa24.67■■□□□ 1.54
SH2D3A-201ENST00000245908 SPECC1LQ69YQ0 1117 aa24.67■■□□□ 1.54
SH2D3A-201ENST00000245908 TRIM65Q6PJ69 517 aa24.67■■□□□ 1.54
SH2D3A-201ENST00000245908 DHX58Q96C10 678 aa24.67■■□□□ 1.54
SH2D3A-201ENST00000245908 BCL11BQ9C0K0 894 aaPredicted RBP24.67■■□□□ 1.54
SH2D3A-201ENST00000245908 DDX41Q9UJV9 622 aaKnown RBP24.67■■□□□ 1.54
SH2D3A-201ENST00000245908 EPSTI1Q96J88 318 aa24.66■■□□□ 1.54
SH2D3A-201ENST00000245908 KIAA1551Q9HCM1 1747 aa24.66■■□□□ 1.54
SH2D3A-201ENST00000245908 ZSCAN12O43309 604 aa24.66■■□□□ 1.54
SH2D3A-201ENST00000245908 MECOMQ03112 1051 aa24.66■■□□□ 1.54
SH2D3A-201ENST00000245908 KMT5BQ4FZB7 885 aa24.66■■□□□ 1.54
SH2D3A-201ENST00000245908 SYMPKQ92797 1274 aaKnown RBP24.66■■□□□ 1.54
SH2D3A-201ENST00000245908 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.65■■□□□ 1.54
SH2D3A-201ENST00000245908 WNT7AO00755 349 aa24.65■■□□□ 1.54
SH2D3A-201ENST00000245908 CRNKL1Q9BZJ0 848 aaKnown RBP24.65■■□□□ 1.54
SH2D3A-201ENST00000245908 DCP1AQ9NPI6 582 aaPredicted RBP24.65■■□□□ 1.54
SH2D3A-201ENST00000245908 SAMSN1Q9NSI8 373 aaKnown RBP24.65■■□□□ 1.54
SH2D3A-201ENST00000245908 KLRK1P26718 216 aa24.64■■□□□ 1.54
SH2D3A-201ENST00000245908 TTC38Q5R3I4 469 aa24.64■■□□□ 1.54
SH2D3A-201ENST00000245908 TBC1D9BQ66K14 1250 aa24.64■■□□□ 1.54
SH2D3A-201ENST00000245908 TC2NQ8N9U0 490 aa24.64■■□□□ 1.54
SH2D3A-201ENST00000245908 PAGE5Q96GU1 130 aa24.64■■□□□ 1.54
SH2D3A-201ENST00000245908 BAG1Q99933 345 aaPredicted RBP24.64■■□□□ 1.54
SH2D3A-201ENST00000245908 DNAI1Q9UI46 699 aa24.64■■□□□ 1.54
SH2D3A-201ENST00000245908 CNTNAP4Q9C0A0 1308 aa24.64■■□□□ 1.54
SH2D3A-201ENST00000245908 COL24A1Q17RW2 1714 aa24.64■■□□□ 1.53
SH2D3A-201ENST00000245908 STX10O60499 249 aa24.64■■□□□ 1.53
SH2D3A-201ENST00000245908 NR1I3Q14994 352 aa24.64■■□□□ 1.53
SH2D3A-201ENST00000245908 SRBD1Q8N5C6 995 aaKnown RBP24.64■■□□□ 1.53
SH2D3A-201ENST00000245908 CTCFLQ8NI51 663 aaPredicted RBP24.64■■□□□ 1.53
SH2D3A-201ENST00000245908 ATP8A2Q9NTI2 1148 aa24.64■■□□□ 1.53
SH2D3A-201ENST00000245908 PPP2R2CQ9Y2T4 447 aa24.64■■□□□ 1.53
SH2D3A-201ENST00000245908 A0A1B0GTH6 734 aa24.63■■□□□ 1.53
SH2D3A-201ENST00000245908 GTF2E1P29083 439 aaPredicted RBP24.63■■□□□ 1.53
SH2D3A-201ENST00000245908 RPS8P62241 208 aaKnown RBP24.63■■□□□ 1.53
SH2D3A-201ENST00000245908 ATP2C1P98194 919 aaPredicted RBP24.63■■□□□ 1.53
SH2D3A-201ENST00000245908 FBXO38Q6PIJ6 1188 aa24.63■■□□□ 1.53
SH2D3A-201ENST00000245908 BICDL1Q6ZP65 573 aa24.63■■□□□ 1.53
SH2D3A-201ENST00000245908 CCDC88AQ3V6T2 1871 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms